Gracilinanus agilis (agile gracile opossum): 123240124
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Entry
123240124 CDS
T07702
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123240124 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123240124 (BARD1)
04121 Ubiquitin system [BR:
gas04121
]
123240124 (BARD1)
03036 Chromosome and associated proteins [BR:
gas03036
]
123240124 (BARD1)
03400 DNA repair and recombination proteins [BR:
gas03400
]
123240124 (BARD1)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
123240124 (BARD1)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
123240124 (BARD1)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
123240124 (BARD1)
DNA repair and recombination proteins [BR:
gas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
123240124 (BARD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_4
Ank_2
Ank_5
zf-RING_6
Ank_3
BRCT
BRCT_2
Ank_KRIT1
RTT107_BRCT_5
ANK_LRRK2
DUF5529
DUF3464
Motif
Other DBs
NCBI-GeneID:
123240124
NCBI-ProteinID:
XP_044523455
LinkDB
All DBs
Position
3:complement(610981588..611114284)
Genome browser
AA seq
769 aa
AA seq
DB search
MQRDQPLRVRSGNQQWPEPSMQPAGGGDVGVGAWAHSREALELLETQLRCSRCMCVGDCI
GTECPVCHTPAWIQDVKINRQLDNMIQLCSRLRNLLHNPPGTDVEESTPKTRTPQDEDES
NKKFIKMWFSPRSKKVRYVLNRTLVQTQPQPVENEQDYQAFEFNSSSLERDSPQKPKKVT
RKTRKKQKKRSLAEINQEWDSEEKKQKEVHQLDESLDEKLKEKSVSFCNQPSVLGTPELN
GDLLHYDSVTEASPAAVTTDSSPLPATQADSVEMNRDGEVASSHLESLSEDNFPSETSLP
LSNGSSSFVVPVSKRLRGRRSQQRARRASLSPDDPPESLPPSEESASSPTPQSLAEEPFL
RVRNSDVLNDSIYFSPPKSSGTSSSSVMNSPCQPWIVASPSVVKMSPTIPMTVKRNHRGE
TLLHIASIKGDIPSVERLLQNGSDPNVKDHAGWTPLHEACNHGHQKVVELLLEHKALVNT
TGYQNDSPLHDAVRNGHVSIAKLLLSHGASRSAVNIFGLRPVDYAETEAMKSVLLLPEES
KIYKTSHCSRSLNTSFRRDDPLVLLSSGLTSDQQKLLSKLTAVLKAKKCTEFNSTVTHII
VPGDTAQRTMKCILGIISGCWILKFDWVKACLESRMCEPEENYEMPGGPQRSRLNREQLL
PKLFDGCYFYFEGIFKHHSKDELVKLAKESGGQILNRKPKPDSDVTQTINTVSYHARPDS
DQRFCTQYILYDASSNYRPERVRQGKVWMAPSNWFIDCLMAFQVLPVTE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgaccagccgctaagggtccgctccgggaaccagcagtggcctgagcccagc
atgcaaccggccggaggaggggacgtcggggtcggagcctgggcccacagccgcgaggcg
ctggagctgctggagacgcagctgcgctgctcgcgctgtatgtgcgtgggcgactgcatc
ggtacggagtgtccagtatgtcacacacctgcttggatacaggatgtgaagataaacaga
cagttggacaacatgatccagttatgcagcaggcttcgaaatctgttacacaaccccccc
ggtacagatgtggaagaaagcacccctaagacaagaacaccacaggatgaagatgaaagc
aacaagaaattcataaaaatgtggtttagccctcgtagcaagaaagtcagatacgtccta
aatagaactttagtgcagactcagcctcagccagttgagaatgaacaggattatcaagca
tttgaatttaattcctcatctcttgaaagagactctccccagaagcctaaaaaagttacc
cgaaaaaccagaaaaaagcaaaaaaaaagaagcttagctgaaattaatcaagaatgggat
tcagaggaaaaaaagcaaaaagaagtccaccaactcgatgagagtctcgatgagaaactc
aaagaaaagtctgtatccttctgtaaccagccctctgtgctgggaaccccagaactaaat
ggagatctcttacattatgactctgtcacagaggccagtcctgctgcagtgacgaccgac
agctccccattgccggccacacaagcagattctgtagaaatgaacagagatggtgaggta
gcctcctcccacctggaatctcttagtgaggataacttcccatcagagacttccttgcca
ttgagtaatggctcatcctcctttgtcgtgcctgtttctaaaaggcttagagggagaaga
agccagcagagagcccgaagagcatctctcagccccgatgaccccccagagtcattaccc
ccttctgaagaaagtgcctcatctcccacgccccaaagtctagctgaagagccgttcctg
agggtgaggaacagcgatgtattgaatgactccatctacttctccccacccaaatcttct
ggtacttcatcatcatccgtgatgaatagcccttgtcagccctggatagtggccagccct
tctgtggtgaagatgtctcccaccatccctatgaccgtcaagagaaaccatagaggggag
actctgctccatattgcttctattaagggtgacataccatctgttgaacgccttctccaa
aatggaagtgacccaaatgtaaaagaccatgctggatggactccattgcacgaagcctgt
aatcatggacatcagaaggtcgtggaactgcttttggagcacaaggctttggtaaacacc
actggctaccagaatgactcgccactccatgatgcggtcaggaatgggcatgtgagcatt
gccaagctgttactctctcatggagcctcccggagtgctgtaaacatatttggtctccgg
cctgtggattatgcagaaactgaagctatgaaatcagtgttgttgctgccagaggagagt
aaaatatataaaactagccattgctcaagatccttgaatactagttttcgaagagatgac
cccctggttctcctcagcagtggtcttacctcagatcaacaaaaattactgagtaagctc
acagcagttcttaaggctaagaagtgtactgagtttaacagcacagtcactcatatcatt
gttcctggtgacacagcccaaagaaccatgaaatgtattcttggtatcatcagtggatgc
tggatcctaaaatttgattgggtaaaggcctgtctagaaagcagaatgtgtgaaccagag
gaaaactatgaaatgcctggtggtccacagagaagcaggctcaacagagaacagctgctg
ccaaagttgtttgatggctgttacttctattttgagggaattttcaaacatcattcaaag
gatgagcttgtaaaactggccaaagaatctggagggcagatcctcaatcgaaagccaaaa
ccagacagtgatgtgacccagacgatcaatacggtatcataccacgccagacctgactct
gatcagcgcttctgcactcagtatatcctctacgatgcttcctccaattatcgcccagag
agggttcgtcagggcaaagtttggatggccccctccaactggttcatagactgcttgatg
gcattccaggtgcttcctgtgaccgagtga
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integrated database retrieval system
