Gracilinanus agilis (agile gracile opossum): 123240173
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Entry
123240173 CDS
T07702
Symbol
ATXN1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04330
Notch signaling pathway
gas05017
Spinocerebellar ataxia
gas05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
123240173 (ATXN1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
123240173 (ATXN1)
05022 Pathways of neurodegeneration - multiple diseases
123240173 (ATXN1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
PGC7_Stella
Motif
Other DBs
NCBI-GeneID:
123240173
NCBI-ProteinID:
XP_044523525
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All DBs
Position
1:600278131..600296580
Genome browser
AA seq
808 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPATSRPSEEKPVVVPNDNHRAESLTWLPNTQSGQGNMGGRP
GPGGTSTADLGLQQGIGLHKSLSTGMDYSPPSAPRSVPATTTLPAVYPPPQSGTPVSPVQ
YTHLPHTFQFIGSSQYSGPYAGFIPSQLISPTANPATSGVASASVATTPSQRSQLEAYST
LLANMGSLSQQPGHKVEQPQHLIRTPGLITAGSPPPTQQNQYVHISSSPQSAGRTMSPPA
IPVHLHPHQTMIPHTLTLGPSSQVVVQYTDSGGHFVPRESTKKTESSRLQQAIQAKEMLN
GEMEKSRRYGVPSSADLGLVKASGKTASHHYETRHVVVHSSPADYSTRDSSGARTSVMVL
PNSNTPTTDMEVQQVTHREASPSTLNDKSSLHLGKPSHRSYALSPQQALGPEGVKATVAT
LSPHTVIQTTHSASDPLPVGLPATAFYAGTQPPVIGYLSSQQQAISYAGNLPQHLVIPGT
QPLLIPVGGADMEPSGVAPAIVTSSPQFAAVPHTFVTTTIPKSENFSAESLATQAAYPAM
VQAQIHLPVVQSIASSTAVPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISND
LKIDSSTVERIEDSPTPGIAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQ
LFDLPCSKLSVGDVCISLTLKNLKNGSVKKGQPMDSASILLKHSKNDSLVGSRHRYAEQE
NGINQGSSQMLAENGELKFPDKIGLPAAPLLTKTEPSKPVATRKRRWSAPETRKLEKSDE
EPPLTLPKPSFIPQEVKICIEGRSNVGK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagaacggagcaacgaatgcttgcctcccaaaaaacgtgagattcct
gccactagccggccatcggaggagaagccagtggtcgtgccaaacgacaaccacagggcc
gagagcttaacatggctccccaacactcagagtggacaaggcaacatgggtgggaggcct
ggtcccggagggacctcaacagcagatcttggtttacagcagggaataggtttacacaaa
tcactgtccacagggatggattattctccacccagtgcccccaggtctgttccagccact
accacgctccctgcggtgtaccctcccccgcagtcagggaccccagtgtcccccgtgcag
tacacacacttgccgcacactttccagttcattgggtcctcccagtacagtgggccctat
gctggcttcatcccctcccagctgatctcccctacagccaatcctgccaccagtggagtg
gcctccgcttccgtggccaccactccatcacagcgctctcaactggaggcctattccact
ctgctagccaacatgggcagcttgagccagcagccagggcacaaggttgagcagccacag
catttgatcaggactccagggcttatcacggcagggtccccaccacccacgcagcagaac
caatatgtccatatttccagctctccccaaagtgctggacgcaccatgtcccctccggcc
atcccagtccacctgcatccccatcagacgatgatcccacacacacttaccctggggcct
tcctcccaggtggtggtgcaatacacagactctggtgggcattttgttccccgggaatcc
actaagaagactgagagcagcaggctacaacaggccatccaggccaaggagatgctgaac
ggtgagatggagaaaagccggaggtacggcgttccctcctctgcagacctgggcttagtg
aaggcaagtggaaagacggcctctcaccactatgaaaccaggcacgtcgtggtccactcg
agccccgctgactacagcacccgtgattcctcgggggcccggacctccgtgatggtccta
cccaacagcaacacccccaccacagacatggaagtccagcaggtcacacaccgagaagcc
tccccatccaccctcaatgacaagagcagcctccacctggggaagcccagccaccggtct
tatgctctgtccccgcagcaggctctgggtcctgagggtgtgaaggccacagtggccaca
ctgtcaccacacaccgtcatccagaccacccacagtgcttcggaccccctcccagtcgga
cttccagccacagccttctatgcagggactcagccaccggtcatcggctacttgagcagc
caacagcaagcaatcagttacgctggcaacctgccgcagcatctggtgatccccgggacc
cagcctctgctcatccctgtgggtggcgctgacatggagccatctggggtagcccctgca
atcgttacttcatctccacaatttgcagcagtgcctcatacatttgtcactaccaccatt
cccaagagcgagaacttcagcgcagagtccctggccactcaggcagcctacccagccatg
gtgcaggcccagatccacctccccgtggtccagtccattgcatcatccacagctgttccc
ccaacattgcccccttacttcatgaaagggtcaatcatccagttggccaacggagagctg
aagaaggttgaggacttgaaaacagaagacttcatccagagtgctgagattagcaatgac
ctgaaaatagactccagcaccgtagagaggattgaagatagccctaccccaggcattgca
gtaatccagtttgcagttggagaacatcgagcacaggtcagcgttgaagtcttggtagaa
tatcctttttttgtatttggacaaggctggtcatcatgctgccccgagagaaccagccag
ctctttgatttgccatgttccaaactctcagtcggggatgtctgcatctcgctcaccctc
aaaaacctgaagaatggctctgttaaaaagggccagcccatggattcagccagcatcttg
ctgaagcactcaaagaacgacagtctagtaggaagtagacacaggtatgccgagcaggaa
aatgggattaatcagggaagttcacagatgctagcagagaatggcgaactaaagtttcca
gacaaaataggattgcctgcagcacccttgctcaccaaaacagaacccagcaagcccgtg
gcaacaaggaagaggaggtggtctgcacccgaaacacggaaactagagaaatcagatgag
gagccgcctttgactcttcccaagccttcttttattcctcaggaggttaagatttgcatt
gaaggtcgatctaatgtaggcaagtaa
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