Gracilinanus agilis (agile gracile opossum): 123240329
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Entry
123240329 CDS
T07702
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04390
Hippo signaling pathway
gas04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
123240329 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
123240329 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gas03000
]
123240329 (SOX2)
Transcription factors [BR:
gas03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123240329 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
123240329
NCBI-ProteinID:
XP_044523714
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All DBs
Position
3:681483732..681484916
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AA seq
348 aa
AA seq
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MYNMLETDLKPPGPQQTSGGGGGGGGGGGGGGPNSTSAGGTNQKNSPDRVKRPMNAFMVW
SRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYR
PRRKTKTLLKKDKYTLPGGLLAPGGNSMGGGVGVGAGGLGGGVNQRMDSYAHMNGWSNGG
YGMMQEQLGYPQHPGLNAHNAAAAAAAAAAAAQMQPMHRYDVSALQYNSMTSSQTYMNGS
PTYSSMAYSQQAAPGGGAGGGGGGAMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGD
LRDMISMYLPSAEVPEPAAPSRLHMSQHYQGAPVPSTAINGTLPLSHM
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgctggagaccgacctcaagcctcccggcccgcagcaaacttcggggggc
ggcggtggcggcggcggcggtggcggcggcggcggccccaactccacttcggcgggcggc
acgaaccagaagaacagcccggatcgcgtgaagcggcccatgaatgccttcatggtgtgg
tcccgcgggcagcggcgcaagatggcccaagagaaccccaagatgcacaactccgaaatc
agcaagcgacttggcgccgagtggaagctgctgtccgaggccgagaagcgtcccttcatc
gacgaggccaagcggctacgcgccctgcacatgaaagagcacccggactataagtaccgg
ccacgccggaaaaccaagacgctgctcaagaaggacaagtacacgctgcccggcggcctg
ctggcgcccggcggcaacagcatgggcggcggcgtcggcgtcggggccggcggcctgggc
ggcggcgtcaaccagcgcatggacagctacgcgcacatgaacggctggagcaacggcggc
tacggcatgatgcaggagcagctgggctacccgcagcacccgggccttaacgcgcacaat
gcggctgcggcggcggccgccgcagccgcagccgcccaaatgcagcccatgcaccgctac
gacgtgagcgccctgcagtacaactccatgacgagctcgcagacttacatgaacggctcg
cccacttacagcagcatggcgtactcgcagcaggccgcccccggcggcggcgctggcgga
ggcggcggtggcgccatggccctgggttccatgggctccgtggtcaagtcggaggctagc
tccagcccccctgtggtcacctcatcgtcgcactccagggcgccctgccaggccggggac
ctgcgggacatgatcagcatgtacctgcccagcgccgaggtgcccgagcccgcggcgccc
agcagactgcacatgtcccagcactaccagggcgcgccggtgccgagcacggccatcaac
ggcacgctgcccctgtcgcacatgtga
DBGET
integrated database retrieval system
