Gracilinanus agilis (agile gracile opossum): 123240386
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Entry
123240386 CDS
T07702
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03082
ATP-dependent chromatin remodeling
gas04714
Thermogenesis
gas05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123240386 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123240386 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123240386 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gas03000
]
123240386 (ARID1A)
03021 Transcription machinery [BR:
gas03021
]
123240386 (ARID1A)
03036 Chromosome and associated proteins [BR:
gas03036
]
123240386 (ARID1A)
Transcription factors [BR:
gas03000
]
Eukaryotic type
Helix-turn-helix
ARID
123240386 (ARID1A)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123240386 (ARID1A)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123240386 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
123240386
NCBI-ProteinID:
XP_044523855
LinkDB
All DBs
Position
3:64801593..64853847
Genome browser
AA seq
1900 aa
AA seq
DB search
MDQMGKMRPQPYGGSNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSTMG
SLSYAQQIPPYGQQGPSGYGQQGQSPYYNQQSPHPQQPPYSQAPPSQTPHAQPSYPQQPQ
SQPPQLQATQPPYSQQPSQPSHQQSPSPYPQQQSTAQQHPQSQPPYSQQQAQSPYQQQPP
QQTASAALSQQSAYPQSQAQQPQQTAYSQQRFPPPQELSQDSFGSQASSAPSMASSKGGQ
EDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHT
SPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGTQMPPRPPSGQSDSIMHPSMNQSS
IAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGQMHAGMGSYQNSMGSYGPQGAQYGPQG
GYPRQPNYNTLPNANYPSAGMAGSMNPMGAGAQMHSQTGMPPYSGLPPGRMSHASMGSRP
YGPNMANMPPQVGSGMCPPPGGMNRKAQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTG
PPYGQGLNSMAGMINPQGPPYPMGGNIANNSAGMAASPEMMGLGEVKLTPATKMNNKADG
TPKPESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTNLPAVGRK
PLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKI
ERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPAS
TPHSQMPPLPGMGPRSNSVGIQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSY
EPNKDPYGSMRKAPGNDPFVSSGQGPNSGIGDPYNRATGPGLGNMAMGQRQHYPYGGPYD
RVRAESGLGPEGNMGTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQQQQQQQQQRHDS
YGNQFSTQGTPSSSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSSGQG
QPPQQQLPPAQPQPASQQQPAQPSPQQDVYNQYGNAYPTAGADRRPAGGPQNQFPFQFGR
DRVSAPPGSNAQQSMPPQMMGGPMQPTTEGPQQGTMWQGRNDMGYNYPNRQNTGSAPQGP
AYHGVNRTDEMLHTDQRVNHEGPWPSHGTRQPPYGPSAPVPPMTRPPQSNYQPPPSMQNH
IPQVSSPAPLRPPLENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPVQPPLIRRDITF
PPGSVEATQPVLKPRRRLTTKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSI
MTFNLGQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFNKASSPSPGEG
EEEEELLSPKMEEEEEEEEEEEAAFAGKDKVLSESSEEKLVSKFDKLPVKIVQKNDPFVV
DCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKMELPLTQVREPLPVAPQKRVPAA
EGTPGAKDREGPLPDGPSEKRITATMDDMLSSRPSTLSDEGAKNAETPKESGKFPFGMNP
VQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHP
GLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLA
NISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKL
SIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAI
AVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVD
ENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatgggcaagatgagacctcagccatatggtggcagtaacccatactcacag
caacagggacctccatcaggaccacagcaaggacatggatacccaggacagccatatgga
tcccagactcctcagcggtaccccatgaccatgcagggccgggcgcagagtacaatgggc
agcctctcttatgcacagcagattcctccttatggtcagcaaggtcccagcgggtacggc
cagcagggccagagtccatactacaaccagcaaagccctcatccacaacagccgccctat
tcccaggcaccaccatctcagactcctcatgcccagccttcctatccacagcagcctcag
tcacagccaccacagctccaggcaacccagcctccttactctcagcagccatcccagcct
tctcatcagcagtccccatctccatatccccagcagcagtcgacagcacaacagcacccc
caaagccagcccccctactcccaacagcaggcacagtcaccctaccagcagcagccacct
cagcagacagcttctgcagccctctctcagcagtctgcataccctcaatcccaggcacag
cagccacaacaaactgcctattcccagcagcgcttccctcctccccaggaattatctcaa
gactcatttgggtctcaggcatcctcagccccttcaatggcttccagtaaaggagggcaa
gaagatatgaacctgagtcttcaatcaagaccctctagcttgccagatctgtctggctcg
atagatgatctccccatggggactgaaggagctctgagccctggtgtgagcacttcaggg
atttccagcagccaaggagaacagagtaacccagctcagtctcctttctctcctcatacc
tcccctcatctgcctgggatccgagggccttccccctccccggtgggctctcctgccagt
gttgctcagtctcgctcaggaccactctcacctgctgcagtgccaggcacccagatgcca
cctcggccgcccagtggccagtcagatagcatcatgcatccttccatgaaccagtcaagc
attgcccaggatcgaggctacatgcagagaaatcctcagatgccccagtacagttcccct
cagcctgggtctgccttatctccacgtcagtcttcaggacagatgcatgcaggcatgggc
tcctaccagaactccatgggaagctatgggccccagggggctcaatatggccctcaagga
ggctaccctaggcagccaaactataacaccctgcccaatgccaactatccaagtgcaggg
atggcagggagcatgaaccccatgggggctggggctcagatgcatagccagaccggtatg
ccgccctacagtggactccccccaggaaggatgagtcatgcctccatgggcagtcggcct
tatggtcccaacatggccaacatgccgcctcaggttgggtcggggatgtgccccccacct
gggggcatgaaccggaaagcacaagaaaccgccgttgccatgcatgttgctgccaactcc
atccaaaacaggcctccaggctatcccaatatgaatcaagggggcatgatgggaactggg
cctccttatgggcaaggacttaacagtatggctggcatgatcaaccctcagggtcctccc
tatcccatgggtgggaacatagccaacaattcagcagggatggcagctagcccagagatg
atgggtctcggggaagtcaaattaacaccagccaccaaaatgaacaacaaggcagatgga
acacctaaacccgagtccaaatccaagaagtccagttcctccaccaccaccaatgagaag
atcaccaagttgtacgaattagggggtgagcctgagaggaagatctgggtggaccgctat
cttgccttcacggaagaaaaagcaatgggcatgaccaacctgcctgctgtgggcaggaaa
cccttggacctctaccgcctctacgtatctgtgaaggagattggcggattgactcaggtc
aataagaacaagaaatggcgggaactggccaccaacctcaacgtgggcacctcgagtagc
gctgccagctccttgaaaaagcagtacatccagtgtctctatgcgtttgagtgcaagatt
gagcggggagaagaccctccccctgatatctttgcagcagcagattccaagaagtcgcag
cccaagatccagccgccatcaccagcggggtcagggtccatgcaggggccacaaacccct
cagtcaaccagcagttccatggcagaaggaggagacttgaagccaccaactccagcatcc
accccccatagtcagatgccccctttgccaggcatgggacccaggagcaactctgtgggc
atccaggatgcctttgctgatggaagcgaccccacgttccaaaagcgaaattctatgact
ccgaaccctgggtaccagcccagcatgaatacctctgacatgatggggcgcatgtcctac
gagccaaataaggatccctatggcagcatgaggaaagctccaggaaatgatcctttcgtg
tcctcagggcagggccccaacagtgggataggggacccctacaaccgtgccacaggccct
ggtttggggaatatggcaatgggacagaggcagcattacccatatggaggcccttacgac
agagtgagggccgaatctggactagggcccgagggaaacatgggcacgggggccccccag
ccaaacctcatgccttccaacccggactccgggatgtactctcccagtcgctacccccca
cagcagcagcagcaacagcagcagcagcagcagcagcaacaacaacaacgacacgattcc
tatggcaatcagttttccactcaaggcaccccttccagcagtccattccccagccagcaa
actacaatgtaccaacagcagcagcagaattataagcggccaatggatggcacctacggt
cctcctgccaagcgacatgaaggggagatgtacagcgtgccgtatagcagtggacaaggc
cagccaccacagcagcagttgcccccagcccagccccagccagccagccaacagcagcca
gctcagccatccccccagcaggacgtgtataaccagtatgggaatgcttatcccactgct
ggtgctgaccgccggccggcaggtggccctcaaaaccagttcccattccaatttggccga
gaccgggtctcagcaccccctggctcaaatgcccagcaaagcatgccaccccagatgatg
ggtggtcccatgcagccaactacagaaggcccccaacagggcaccatgtggcaagggcgc
aatgatatgggctacaactaccctaatcggcagaacacaggctctgccccccaggggcct
gcctaccatggggtgaaccgaacagatgaaatgctgcacacggatcagagggtcaatcat
gagggcccatggccttcccatggcacccgccagcctccatatggtccctcggcccctgtt
ccccccatgacaagaccccctcagtctaactatcagcccccacccagcatgcagaatcac
attcctcaggtatccagccccgctccccttcgcccgcccctggagaaccgcacgtctccc
agcaagtctccattcctacactcggggatgaagatgcagaaggcaggtcctccggtgcct
gcctcacacatagcacctgcccccgttcagcctcccctcatcaggcgagatatcaccttc
cctcctggctccgtggaagccacacagcctgtgttgaaaccgaggaggcggctcacgaca
aaagatattggaactccagaggcatggcgggtgatgatgtccctcaagtcggggttgttg
gcagagagtacgtgggccttagacaccattaatatcttgttgtatgatgacaacagcatc
atgactttcaacttgggccagctgccaggactgttggagctccttgtggaatatttcagg
cgttgcttgattgagatctttggcattctgaaggagtatgaggtgggtgacccaggtcag
agaacattgctagatccagagagattcaataaggcctccagcccatccccaggggaaggg
gaagaagaggaagagcttctgagccccaagatggaagaggaagaagaggaagaggaagag
gaggaagctgcgtttgcaggcaaagacaaggtactctcagagagcagtgaggagaaactt
gtcagcaagtttgacaagctgcctgtcaaaatcgtgcagaagaatgacccctttgtggtg
gactgctcagacaaactggggcgagtacaggagtttgacagtggcctgctgcactggcgg
atcggtggcggtgacactactgagcatatccagacccactttgagagcaagatggagctg
cctctgacccaggtccgggagcccttgccagtggcccctcagaagcgggtcccagcagca
gagggtaccccaggtgcgaaagatagggagggtcccctgcctgatggcccctcggagaag
cgaatcactgccactatggacgacatgctatcatcgcggcccagtaccctgtccgatgag
ggggccaagaatgcggagacccccaaggaaagtggcaagttcccttttggtatgaatcct
gtgcagagccaccggaacatcaaaatcctagaagatgagccccacagtaaggatgagacc
ccactgtgcacccttctggactggcaagactccctggccaagcgttgtgtctgtgtctcc
aacaccatccggagcctgtcgtttgtgccgggcaacgactttgagatgtctaagcacccg
gggctgctgctgattctagggaaactcatcttgctgcaccataagcacccagagcgcaag
caggcgccactgacctacgagaaggaggaggagcaggaccaaggggtgagctgcaacaag
gtggagtggtggtgggactgtttggagatgctccgggaaaacaccctggttacgcttgcc
aacatctcaggtcaactggacctctccccataccccgaaagcatctgcctgccagttctg
gacggactcctgcactgggcggtctgcccttcggccgaagcccaggacccctttcccacc
ctgggccccaacgccgtcctctccccccagagactggttctggaaaccctcagcaaactc
agcatccaagacaacaacgtggacctgatccttgccacgccacccttcagtcgcctggag
aagttgtacagcaccatggtgcgcttcctcagtgaccgaaagaaccccgtgtgccgggag
atggccgtggtgctgctggccaacctggcccagggtgacagcctggccgcccgagccatc
gcagtgcagaagggcagcattggcaacctgctgggcttcctggaggacagcctagctgcc
acccagttccagcagagccaggccagccttctgcacatgcagaatcccccctttgagccg
actagcgtggacatgatgcgccgggcggcccgggcactgctcgctctggccaaggtggac
gagaaccactcggagttcacgttgtacgagtcacggctgctggacatctcggtgtcgccg
ttgatgaactcattggtctcacaagtcatttgtgatgtactgtttttaattggccagtca
tga
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integrated database retrieval system
