Gracilinanus agilis (agile gracile opossum): 123240394
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Entry
123240394 CDS
T07702
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
123240394 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gas03400
]
123240394 (XPC)
DNA repair and recombination proteins [BR:
gas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
123240394 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
123240394
NCBI-ProteinID:
XP_044523907
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All DBs
Position
1:60308396..60338434
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AA seq
927 aa
AA seq
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MARKRASGEEQPGQRRPKKARTQGAEADVFEDQKPKNIRLLGVSGGKRKKSCDPSGPNQG
VSRKSRAKVEATSKNPPKLKEEASSEGDEFTTFTSTPKKIQPVTEASVKQESNEDSDEDE
SEDDWEEVEELKESVPEEMGETTASLKPILSTKPVEIEIETPEQAKERERREKRQIEFET
YLRRMMKRFNKEVHEDTHKVHLLCLLANGFFRNHICNEPDLQAISLSIIPAHFTRVLPSK
VDVPYLSNLVKWFIATFTVNADLSTDDRDNLQSTLARRFAIYSARDNEELVHIFLLILRA
LQLLTRLVLSLQPIPLKLPATKGKKNSSLKSSGSSSQLPSQKSQTQIRSKTNMGQMAASS
KKREESKKTEPQKAAVGRKKHAQSFPSKKEDMVTEEEGTQKPVRERRRTSKVSYKEESGS
DGSESSSDFELSSEDDSHLSNEDSQPGPQRPRRPPLSQKTKAASKSSRKKISSSAKNKGG
GRQPCTLLAASPEATGTRRGKIISSDEEEEEEIGKAVGVDQWLEVFCEGADKWICLDCVH
GVVGQPLTCYKYATKPLSYIIGIDNDGCARDITQRYDPYWMTATRKCRVDSEWWAETLRP
YQSPFGAREDKEEMEFQAKLQAQPLPTAIGMYKNHPLYALKRHLLKYEAIYPETAAILGY
CRGEAVYSRDCVHTLHSKDTWLKQARVVRIGEIPYKMVKGYSNRARKARLVDPQFRDQDD
LALFGHWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMLPIGCVQLKLPNLHRVARKLDID
CVQAITGFDFHGGYSHPVTDGYIVCEEHKEVLLAAWENEQALIEQKEKEKREKRALGHWK
LLVKGLLIRERLKRRFGDKGEAAAAPPEGGGFSSDEEGTSSQAAAKNLAASWPQNRETEE
QQKLRGTRKTKREKREEVKHLFPFEKL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaagcgagcgtcaggcgaggagcagcccggccagcgacgacccaagaaggcc
cggacccaaggggcggaggcggatgtttttgaagatcagaagccaaagaatattcgtctc
ctgggagtctcaggtgggaaaaggaagaagagttgtgatcccagtggacctaatcagggt
gtatcaaggaagtccagggccaaggtggaagcaacatctaaaaatcctcccaagttgaag
gaggaagcttccagtgagggagacgagttcactacctttacaagtacacccaagaagatc
cagccagtgacagaagcatcagttaaacaagagagcaatgaggacagtgatgaagatgaa
agtgaggatgattgggaggaggttgaagaacttaaagagtctgtgccagaagaaatggga
gagaccacagcctccttaaaaccaattctgtctaccaaaccagtggagatagagattgaa
actccagagcaggcaaaggaaagagagagaagagaaaaaaggcagatagaatttgagaca
tatcttcggagaatgatgaaacgcttcaataaagaagtccatgaagatacacataaggtg
cacctgctttgcctgttggcaaatggtttctttcggaatcacatctgtaatgagccagat
ctccaggccatcagcctctccatcatcccagctcactttaccagagtgcttcctagtaaa
gtggatgtcccttacctttcaaacctggtaaaatggtttattgcgacatttactgtcaat
gcagacctttccacagatgatcgagacaacctgcagtctaccttagcaaggcgttttgct
atttattcagcacgagataatgaagaattggtccatatatttttattgattctacgggca
ctgcagcttctgactcggctggtgttatctctgcaacctatccctttgaaattgccagct
acaaagggcaagaaaaacagctccctgaagagttctggaagttcttctcagctccctagc
caaaagtcccaaacccaaatcagatcaaagaccaacatgggacaaatggcagcctcctct
aagaagagagaagaaagcaaaaaaacagagcctcagaaggcagcagtgggcagaaaaaaa
catgcacagtcttttcctagtaagaaagaagacatggtgacagaggaagaaggtacccag
aaacctgtaagggaaagaaggagaacttcaaaggtatcctacaaagaggagagtgggagt
gatgggagtgaaagcagctctgattttgaactctccagtgaggatgacagtcacttatct
aatgaggattctcagcctggccctcagagaccaaggaggccacctctatcccagaagaca
aaggcagcatccaagagcagcaggaagaaaatcagctcatcagcaaagaataaaggaggt
ggcagacagccctgtacccttctggcagcatctccagaggccacaggcaccaggaggggc
aagatcatttctagtgatgaagaagaagaagaagaaattgggaaagcagttggtgtggat
cagtggctagaagtgttctgtgagggggcagataagtggatatgcctagactgtgtacat
ggcgtggtgggccagcccttgacctgttataaatatgccaccaagcctttatcttacatt
attggtattgacaatgatggttgtgcccgggatatcacacagcgctatgacccatactgg
atgacagctacccgaaagtgccgtgtagattcagagtggtgggctgagaccttgagaccc
taccagagcccttttggggcaagagaagataaagaagaaatggagtttcaggcaaagcta
caggcccagcccttaccaactgctattggcatgtataagaatcaccctctttatgccttg
aaaagacatctcctgaaatacgaggccatatacccagagactgctgctatccttgggtac
tgtcgtggggaagctgtgtattctagggactgtgttcacactctacactcaaaggatacc
tggttgaagcaagcaagagtggtcaggattggggaaattccatataagatggtaaaggga
tattccaatcgtgcccggaaggcccgtctagtggatccccagttccgggaccaagatgat
ttggctctctttggccactggcagacagaggagtaccagccacccgtggcagtggatggg
aaggtccctcggaatgaatttggaaatgtttacctcttcttgcccagtatgctgcccatt
ggctgtgtccagctcaaactgcccaacctgcatcgagtggctcgaaagctggatattgac
tgcgtgcaggctatcactggcttcgacttccatggtggctactcgcatcctgtaacagat
gggtacattgtgtgtgaagaacacaaggaagtgctcttggccgcctgggaaaatgaacaa
gcactcattgaacaaaaggagaaagagaaaagagagaagagagccctagggcattggaag
ttactggtgaaaggactcctcataagagagagactgaagcggcgctttggtgacaagggc
gaggccgctgcagcacccccagaaggaggaggattctcatcagatgaggaagggaccagc
tcacaggcagcagccaaaaatctggctgcctcctggccccaaaaccgagaaacagaagag
cagcagaaactgagaggaacgaggaagacgaaaagggaaaaaagagaggaagtcaagcac
ctgttcccttttgaaaagttgtaa
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