Gracilinanus agilis (agile gracile opossum): 123240413
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Entry
123240413 CDS
T07702
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
123240413 (PUM1)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
123240413
NCBI-ProteinID:
XP_044523898
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Position
3:complement(69700058..69863490)
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AA seq
1189 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKQHTQETANPNMPVVLTSGTAGSQAQQQPAANPALAAG
THSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDDSSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVIDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSGAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAAHQPHIGL
APAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAA
AAAAASNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAF
GQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVA
AAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPNSNLASSSFYGNNSLSSNSQSSS
LFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKR
TSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTN
GSGRYISAAPGAEAKYRSASSASSLFSPSSALFPSSRIRYGLSDVMPSGRSRLLEDFRNN
RYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGN
YVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVREL
DGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHC
LPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF
ASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQR
KIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgttttgaagagaaaagcagtgctctggcaggactccttcagcccc
cacctgaaacagcacacgcaagaaacagctaatcccaacatgcctgttgttttgacatct
ggaacagcagggtcccaggcacagcaacagccggctgcaaacccggcgcttgcagcaggg
actcactcgagcccggtcccaggatccataggggttgcgggccgctcccaggacgacgcc
atggtggattacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggt
ggcggctataataacagcaaacatcgctggcctactggggataacattcatgcagagcac
caggtacgatctatggatgaactgaaccatgattttcaagctcttgctttagagggaaga
gccatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgattccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgggacagtgcctggggaacatca
gatcattcagtttcccagcccatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtattgtccccacggtcggagagtggaggactaggagttagc
atggtggaatatgtattgagttcatcccctggtgattcctgtttaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtaca
tttgatggagataagctaggagatttgaaggaggagggtgatgtgattgacaagaccaat
ggtttaccagtacagaatgggattgatgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggcttagcccagctgaccagcactaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggagcatgttggcatggagcctcttcagttt
gattattcaggcacccaggtacctgtggactcaggagcagcaactgtgggactctttgac
tacaattctcaacaacagctcttccaaagaccgaatgcccttgctgttcaacagctcacc
gctgcccaacaacaacagtatgccctggcagccgccgcccatcagcctcacataggttta
gctcccgccgcgtttgtccccaatccatacatcatcagtgccgcgcctccagggacggat
ccttacacggcaggattggctgcagcagcaactctaggccctgctgttgtccctcaccag
tattatggagttactccctggggagtctatcctgccagtcttttccaacagcaagctgct
gcggctgcggctgcaagcaattcagctaaccaacagaccactcagcaaactcagcaaggg
cagcagcaggttcttcgtggaggtgccagccaacgtcctttgaccccaaatcaaaaccag
caaggccagcaaactgatccacttgtggcagctgctgcagtaaactctgctctcgcattt
gggcagggcttggctgcagggatgccagggtatcctgtcttggcaccagctgcttattat
gaccagactggggccctcgtcgtcaatgctggggctaggaatggcctgggagctcctgtc
cgcctcgtggcccctgcccccgtcatcatcagctcctcagcagcacaagcagctgtcgca
gctgcagcagcttctgcaaatggtgcggctggtggtcttgcaggcacgacaaacggacca
ttccgcccattaggaactcagcagcctcagccccagccccagcagcaacccaacagcaac
ttggcatccagttcattttatggcaacaactctctgagcagtaattcccagagtagctcc
ctcttttctcagggctctgcccagcctgccaacacatcccttggatttgggagcagcagc
tctcttggagccactctggggtcagctcttggaggatttggaactgcagtggcaaactca
aatactggtagtggctcccgccgagactccctgactggcagcagtgacctatataagaga
acatccagcagtttgacccccattggacacagtttttataatggccttggcttttcttcc
tctcctggacctgtcggaatgcctctccctagtcaggggccagggcattcccagacacca
cctccttctctctcttcacatggatcttcttcaagtctgaacctgggagggcttaccaat
ggcagcggaagatacatctctgcagctcctggagctgaagccaagtaccggagtgcaagc
agcgcatctagcctctttagccctagtagcgctctgttcccttcctcacgcattcgctat
ggcctgtcagacgtcatgccctctggccggagcagacttttggaggacttccgcaataac
cgctaccccaacttacaacttcgggagatcgcgggtcacatcatggaattttctcaagac
cagcatgggtccagattcattcagctgaagctagagcgtgccacgccagctgaacgccag
cttgtcttcaatgaaattttgcaggctgcctaccagctaatggtcgatgtctttgggaac
tatgttattcagaaattctttgaatttggtagccttgaacagaagttggcattggcagaa
aggattcgtggacatgttttatccctggctttgcagatgtatggctgtcgggtcatccag
aaagctctcgagtttattcccccagaccagcaggtaattaatgagatggtacgggagtta
gatggccacgtcctgaaatgtgtgaaagaccagaatggtaatcatgtggttcagaagtgt
atcgaatgtgtgcaacctcagtctctacagtttatcattgatgcatttaagggacaggtg
tttgcactgtctacacatccttatggttgtcgagtcattcagaggatcctggagcactgt
cttccggaacagacgcttcccattttagaggagcttcaccagcacacggagcagcttgtc
caggaccagtatggaaactatgtaatccaacacgtattggagcatggtcgtcccgaggac
aaaagcaaaatcgtagcagaaataagagggaatgtgcttgtgttaagtcagcacaaattt
gcaagcaatgttgtagaaaaatgtgttactcatgcatctcgcacggagcgtgccatgctg
attgatgaggtgtgcaccatgaatgatggccctcacagtgccttatacaccatgatgaaa
gatcaatacgccaactacgtggtccagaaaatgattgatgtggccgaaccagcccagcgg
aagattgtcatgcataagatccggcctcacattgcaactttacgcaagtacacctatggc
aaacacattctggcaaagctggaaaaatactatatgaagaatggggtggacttggggcca
atttgtggaccacccaatggcatcatttga
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