Gracilinanus agilis (agile gracile opossum): 123240431
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Entry
123240431 CDS
T07702
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03082
ATP-dependent chromatin remodeling
gas03083
Polycomb repressive complex
gas04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123240431 (RBBP4)
03083 Polycomb repressive complex
123240431 (RBBP4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
123240431 (RBBP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123240431 (RBBP4)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
123240431 (RBBP4)
Histone modification proteins
HAT complexes
HATB complex
123240431 (RBBP4)
HDAC complexes
Sin3A-HDAC complex
123240431 (RBBP4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
123240431 (RBBP4)
PRC2.2
123240431 (RBBP4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
123240431 (RBBP4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
123240431 (RBBP4)
Chromatin remodeling factors
NuRD complex
123240431 (RBBP4)
NuRF complex
123240431 (RBBP4)
NuRF complex (fruit fly)
123240431 (RBBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
123240431
NCBI-ProteinID:
XP_044523930
LinkDB
All DBs
Position
3:complement(74672949..74694413)
Genome browser
AA seq
424 aa
AA seq
DB search
MADKEAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDF
SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI
NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY
GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDPE
GQGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaagcctttgatgatgctgtagaagaacgagtgatcaacgaggagtat
aaaatatggaaaaaaaatactccttttctctatgacttagtgatgacccatgccctagaa
tggcccagcctgactgcacagtggcttccagatgtaacaagacctgaagggaaagatttc
agcattcatcgacttgtcctgggtacacacacatctgatgaacagaatcatcttgtgata
gccagtgtacagctccccaatgatgatgctcagtttgatgcctctcactatgacagtgag
aaaggagaatttggaggctttggctcagttagcgggaaaattgaaattgaaatcaagatt
aaccatgaaggagaagtgaatagggcccgttatatgccccagaatccttgcatcattgca
acaaagactccatccagtgatgtccttgtttttgactacaccaagcacccttcaaaacca
gacccttctggagagtgtaacccagatttgcgcctccgtggacatcaaaaggagggctat
gggttgtcgtggaacccaaatctcagtggacacttgcttagtgcatcagatgaccatacc
atctgcttgtgggacatcagtgctgttccaaaggaaggtaaagtagtggatgcaaagacc
atattcacaggacacacagcagtagttgaagatgtttcttggcacctcctccatgaatct
ctctttggatcagttgctgatgatcagaagcttatgatctgggacacgcggtcaaataat
acttctaaaccaagccactcagtggatgcccacactgccgaagtaaattgtctttctttt
aatccttatagtgagttcattcttgccacaggatcagctgataagacagttgcattgtgg
gatcttagaaatctgaaattgaagttgcattcctttgagtcacataaggatgaaatattc
caggttcagtggtctcctcacaatgaaactattttggcttccagtggcactgaccgaagg
ctgaacgtctgggacttgagtaaaatcggggaggaacagtccccagaagatgcagaagat
ggcccaccagaattgttgtttattcatggtggccacactgccaaaatatctgatttctcc
tggaacccaaatgaaccttgggttatttgttctgtatcagaagacaatatcatgcaagtc
tggcagatggctgagaacatatacaatgatgaagaccctgaaggaagtgtggatccagag
ggacaggggtcctag
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integrated database retrieval system
