KEGG   Gracilinanus agilis (agile gracile opossum): 123240434
Entry
123240434         CDS       T07702                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gas  Gracilinanus agilis (agile gracile opossum)
Pathway
gas03082  ATP-dependent chromatin remodeling
gas03083  Polycomb repressive complex
gas04110  Cell cycle
gas04213  Longevity regulating pathway - multiple species
gas04330  Notch signaling pathway
gas04350  TGF-beta signaling pathway
gas04613  Neutrophil extracellular trap formation
gas04919  Thyroid hormone signaling pathway
gas05016  Huntington disease
gas05031  Amphetamine addiction
gas05034  Alcoholism
gas05165  Human papillomavirus infection
gas05169  Epstein-Barr virus infection
gas05200  Pathways in cancer
gas05202  Transcriptional misregulation in cancer
gas05203  Viral carcinogenesis
gas05206  MicroRNAs in cancer
gas05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:gas00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    123240434 (HDAC1)
   03083 Polycomb repressive complex
    123240434 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    123240434 (HDAC1)
   04350 TGF-beta signaling pathway
    123240434 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    123240434 (HDAC1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    123240434 (HDAC1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    123240434 (HDAC1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    123240434 (HDAC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    123240434 (HDAC1)
   05202 Transcriptional misregulation in cancer
    123240434 (HDAC1)
   05206 MicroRNAs in cancer
    123240434 (HDAC1)
   05203 Viral carcinogenesis
    123240434 (HDAC1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    123240434 (HDAC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    123240434 (HDAC1)
   05165 Human papillomavirus infection
    123240434 (HDAC1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    123240434 (HDAC1)
  09165 Substance dependence
   05031 Amphetamine addiction
    123240434 (HDAC1)
   05034 Alcoholism
    123240434 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gas03036]
    123240434 (HDAC1)
Enzymes [BR:gas01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     123240434 (HDAC1)
Chromosome and associated proteins [BR:gas03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     123240434 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     123240434 (HDAC1)
    BRAF-HDAC complex
     123240434 (HDAC1)
    REST complex
     123240434 (HDAC1)
    SHIP complex
     123240434 (HDAC1)
    MiDAC complex
     123240434 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     123240434 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    123240434 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    123240434 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 123240434
NCBI-ProteinID: XP_044523937
LinkDB
Position
3:complement(75055051..75087194)
AA seq 482 aa
MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAH
ADEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQPIPEDGMQEDSGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSANFKKAKRVKMEEEKDREPEEKKEAKEEEKSKEEKPEAKGVKEETK
SA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgctgactcagggcacgaagcgaaaagtctgttactactacgacggggatgtcgga
aattactattatggtcagggccacccaatgaaaccccatcgaatccgaatgactcacaac
ttgctactaaactatggactctaccggaagatggaaatatataggccccacaaagcccat
gctgatgagatgacaaagtaccacagcgatgactacattaagtttttgcgctcaatccgt
cctgataacatgtcggagtatagcaaacaaatgcagagatttaatgttggtgaagactgc
ccagtgtttgatggcttgtttgagttctgtcaattatccaccggcggatctgttgcaagt
gcggtgaagcttaataaacaacagacagatattgctgtgaactgggctgggggcctgcac
catgcgaagaagtctgaagcatctggcttctgctacgtcaatgatattgtgttggccatc
ctggaactgttaaagtaccaccagagggtgctgtatattgacattgacattcaccatggc
gatggcgtggaagaagctttctacaccacagatcgggtcatgacagtgtcctttcataag
tatggagagtacttcccgggaacgggggacctacgggacattggagctggcaaaggcaaa
tactatgctgttaactacccacttcgagatgggattgatgacgagtcttatgaggccatc
ttcaaaccagttatgtccaaggtaatggagacttttcagcccagtgcagtggtcttgcag
tgtggttctgattctctgtctggagaccgcttaggttgtttcaacctgaccatcaaaggc
catgccaagtgtgtggagtttgtcaagagcttcaatctccccatgctgatgctgggaggg
ggtggctacactattcgaaatgtagccaggtgctggacatatgagaccgctgtggccttg
gacacagagatccccaatgaacttccctacaatgattactttgaatactttggacctgat
ttcaaacttcatatcagcccatctaacatgacaaaccagaataccaatgagtacttggag
aagatcaaacagaggttatttgagaaccttcggatgttgccacatgcccctggtgtccag
atgcagcccattcctgaggatggcatgcaggaggacagtggagatgaggatgaggaagac
cctgataaacgcatttcaatatgttcctcagacaagagaattgcatgtgaagaggagttt
tcagactcagatgaagaaggtgagggtggtaggaagaattcagctaacttcaagaaggcc
aagagggtcaaaatggaagaggagaaagatcgagagccagaggagaaaaaagaagcaaaa
gaggaagagaagtcaaaagaagagaaacctgaagccaaaggggtgaaggaggagaccaag
tcagcctga

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