Gracilinanus agilis (agile gracile opossum): 123240946
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Entry
123240946 CDS
T07702
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123240946 (CHD5)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123240946 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
Chromo
HDA2-3
ResIII
HTH_Hrp3
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
123240946
NCBI-ProteinID:
XP_044524591
LinkDB
All DBs
Position
3:complement(39764943..39912993)
Genome browser
AA seq
1812 aa
AA seq
DB search
MRGPLGTEEEPPQLPEEEEEEMENDEDMSVLKAVSLFMQLKVMRGRKEGEKERKGERGRE
KGSNDELSDNEEEMEEKSDSEGSDYSPNKKKKKKLKEKKEKKSKRKKKDEEEDENEDGGL
KEPKSSGQLMEEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVL
GAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLTVSPPQPIQPMPIRKAKTKEGK
GGQTTEKGSRHIHGRAQRVAQQTESLLRASSKPIPAGTPCPPLKGKVQRILHWKWTEPPA
PFITVLPPPDADPGIPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNY
QRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPHYAKMEERFYRYGIKPEWMMIHRILNHSF
DKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYENLKQGYWNHRELMLGEDSRPPKRLNKK
GKKLKDDKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTI
LADEMGLGKTVQTIVYLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTG
DKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAILGSIEWA
CLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLE
GFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKF
ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS
SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA
IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK
VMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFK
DDVEGMMPQGQRINMPEPVAPAPDVQASKGGGTLAAGVKKKHGSTPPGDNKDVEDSSVIH
YDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVD
PDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGS
EDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAI
MRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLS
RQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPENKKSSEIISSDPNTPVPASPAHIP
PGPLGLPDKMEAQLGFLDEKEQMEQKPPKPPELQIPGMPTDRGDGEEKQENLENKERLRE
ERREENEKPDPSSDQLLKDDAFPEKDKSLEKMELNLGHGRGDDKDFRPEDSKVDEKEMAE
SQQNGEKEDDEDGKKDDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRR
HDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQA
LVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHK
VLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTVQQGSFGS
SQMYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTATPTGPPASHPERKGADSLKDGAALGR
KGKLNDVICIED
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcacagaggaggagccgccgcagctgcccgaggaggaggaagag
gagatggagaacgacgaggacatgtcagtcttgaaagctgtgtccctgttcatgcagctc
aaggtcatgagagggagaaaagagggagagaaagagagaaaaggagagagagggagagag
aaagggagtaatgatgagctgtctgataatgaagaggagatggaagagaaatcagacagt
gagggaagcgactattctcctaataaaaagaagaagaaaaagctcaaagagaagaaagag
aaaaaatccaagcggaaaaagaaggacgaagaggaggatgagaatgaagatggaggttta
aaggagcccaagtcttcaggccagctcatggaggaatggggcctggatgatgtggattat
ctgttctctgaagaggattatcacactttgaccaactacaaggccttcagccaatttctc
aggcctctcattgccaagaagaaccccaagatccccatgtctaagatgatgacggtcctg
ggggccaagtggcgagaattcagcgccaacaacccattcaaggggagctcggcggcagcc
gcagcagcagccgtggctgccgctgtggagaccgtcaccatcgccccaccgctgaccgtc
agccctcctcagcccatccagcccatgcctatccggaaggccaagaccaaggagggcaaa
ggtggccaaacaactgagaaaggctctcgccacatccatggcagggcgcagcgagtggct
cagcagaccgagagcctcctccgagcttcctcgaaacccatcccagccggaaccccatgc
cctcccttgaaagggaaagtccaacggatcttgcactggaaatggacagagcctcctgcc
cccttcatcactgtgctgcccccgcctgatgctgacccgggcatccctccacccaagcct
ctggagggcattcctgagcgggagttctttgtgaagtgggctggactgtcctattggcat
tgttcctgggtgaaggagctgcagctggagttgtatcacacggtgatgtaccggaactac
caaaggaagaatgacatggacgagcccccgccctttgactatggctctggagatgaggat
ggtaagagtgagaagaggaagaacaaggacccccactacgccaagatggaggagaggttt
tatcgctatgggatcaagcctgaatggatgatgattcaccggatcctgaaccacagcttt
gacaagaagggggatgtgcattacttgatcaagtggaaagaccttccctatgaccagtgt
acctgggagattgatgacatcgacataccctactatgagaatctgaagcaaggctattgg
aaccacagggagctgatgttaggagaagattcccggccacccaagagactgaacaagaaa
gggaaaaagctgaaagatgacaaactggagaagcccccagagacgcctttagtggatccc
actgtcaagttcgacaagcaaccgtggtacatcgatgccacagggggcaccctccaccct
tatcaactggaggggctgaactggctgaggttctcctgggcccagggcacagataccatc
ctcgctgatgagatgggactggggaagacagtccagaccatcgtgtacttgtattctctc
tataaggagggtcactcaaaggggccatacttggtcagtgcccccctgtccaccatcatc
aattgggagagggaattcgagatgtgggcaccagacttttatgtggtcacttacacgggg
gacaaggagagccgatcagtgattcgggagaatgagttttcctttgaggacaacgccatc
cggagtgggaagaaggttttccgcatgaaaaaggaggcacagatcaagtttcatgtcttg
ctcacgtcctatgaactcattaccattgaccaggccatcctggggtccatcgaatgggcc
tgtcttgtggtagatgaagctcacaggctgaaaaacaaccagtccaagttctttagggtg
ttgaatagctacaagattgactacaagctgctgcttacagggacccccctgcagaacaac
cttgaggaactgttccatcttctaaacttcctgactccagaacggttcaacaacctagag
ggcttcctggaggagtttgctgatatttccaaggaagatcagatcaagaagctgcatgac
ctgctggggccccacatgctgaggcgactgaaagctgatgtgtttaagaacatgccagcc
aagacggagctgattgtgcgagtggagctaagccagatgcagaagaaatactacaagttc
attctgaccagaaattttgaagccttgaactccaaaggtggcggaaatcaagtgtctctg
ctgaacatcatgatggacctgaagaaatgctgcaaccacccgtatctcttccccgtggct
gccgtggaggcaccagttttacccaatggttcctatgatggcagctccttggtcaagtct
tctgggaagctcatgctcctgcagaagatgctgaaaaagttgcgtgatgaagggcaccgg
gttttaatcttctctcagatgaccaaaatgctggatctgctggaagatttcctggagtac
gaaggctataagtacgagcgaattgacggtgggatcacgggaggtcttcggcaagaagcc
atcgacagattcaacgctcccggagcccagcagttctgtttcctcctctccacccgggct
ggtggtctgggcatcaacttggccactgctgacaccgtcatcatctacgactcggactgg
aatcctcacaatgacatacaggccttcagcagagcccaccgcatcgggcagaacaagaaa
gtcatgatttaccgcttcgtcacgagggcctccgtagaggagcgaatcacccaggttgcc
aagcgcaagatgatgctcacgcacttagtggtgcgacctggcctgggctcgaagtccggg
tccatgaccaagcaggagctggacgacatcctgaagtttgggacggaggagctctttaaa
gacgacgtggaaggcatgatgcctcagggtcagcggatcaacatgcctgagcccgtggcg
cctgcccccgatgtccaggcctccaaaggtggtggcaccttagcagctggggtgaaaaaa
aagcatggcagcaccccaccaggtgacaacaaggacgtggaagacagtagtgtgatccat
tatgacgatgccgccatttctaagctgctagatcggaaccaggatgccacggatgacacg
gagctgcagaacatgaatgagtaccttagctccttcaaggtggcccaatacgtggtccgg
gaagaagatggcgtggaggaggtcgaaagggagatcattaagcaggaggagaatgtggat
cctgactattgggagaagctccttcgtcaccactatgagcaacagcaagaggatctggcc
cggaacctgggcaaggggaagaggatacggaaacaggtcaattataatgatgcatcccag
gaggaccaagaatggcaggatgagctgtcagacaaccagtcggagtactccatcggctcc
gaggatgaggatgaggactttgaagagaggcccgaaggtcagagtgggaggagacaatcc
cggaggcagctaaaaagtgaccgagacaagcctttaccccctctgctggcacgagttgga
ggcaacattgaggtcctagggtttaatgcccggcagcggaaagccttcttgaatgccatc
atgcgctggggcatgcccccccaggatgccttcaactctcactggctagtccgggacctt
cgagggaaaagcgagaaggaatttagggcctacgtgtccctcttcatgagacacttgtgt
gagccgggggccgacggggcagagacctttgcagatggtgtccctcgggaggggctttct
cgacagcatgtgctcacccggattggagtcatgtcactagttaggaagaaggtccaggaa
tttgaacacgttaatgggaagtacagcacgcctgacctgattcctgagaacaagaaatcc
agtgagatcatctcctcggaccccaataccccagtcccagccagcccggcccatattcct
cctggccctttggggctaccagacaaaatggaagcccagctgggcttcctggatgaaaaa
gaacaaatggaacagaaaccccccaaacctcctgaacttcagattccagggatgcccact
gacagaggggatggtgaggagaagcaggagaaccttgaaaacaaagagagactccgagaa
gagaggagggaagagaatgaaaagcctgatccctcttcagatcagctgctcaaagatgat
gcttttcctgaaaaagataaatccctggagaagatggagttaaatctgggccacggcaga
ggggatgacaaagatttccggccagaggactccaaggtagacgagaaggaaatggcagaa
agccagcaaaacggggaaaaggaagatgacgaggacggcaagaaggacgacaagaacggg
aaatttaaattcatgtttaacatcgccgacggggggttcacagagttgcacacgctgtgg
cagaacgaggagcgtgcggctgtctcctcagggaagatctatgacatttggcaccggcgc
cacgattactggcttctggcgggcatcgtgacgcacggctacgcccgctggcaggacatc
cagaatgacccccgctacgtgatcctgaatgagcccttcaagtccgagatccacaagggc
aattacctggagatgaaaaacaaattcctggctcgaaggtttaagcttctagagcaggcg
ctagtgatcgaagaacagctcaggagggccgcgtacctcaacatgacccaagaccccaac
catccagccatggccttgaatgcccgcctggccgaagtggaatgccttgccgagagccac
cagcacttgtccaaggagtccctggctgggaacaagcccgccaatgctgtcttgcataag
gtactgaaccagctggaagaacttttgagtgacatgaaggctgatgtcacccgcctgccc
tccatgttgtcccggatcccgcctgtggccgctcgcctgcagatgtcggaacgcagcatc
ctgagccgcttgacaaaccgagccggagaccccaccgtccagcagggttctttcggctcc
tcccagatgtacaacaacaactttgggccaaacttccggggtcctggaccaggcgggatt
gtcaactacagccagatgcccctcggcccctatgtgactgccacgcccactgggccacct
gccagccaccccgaaagaaaaggagctgactcccttaaagatggtgctgctttgggacga
aaggggaaactcaatgatgtcatctgcattgaagactaa
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