KEGG   Gracilinanus agilis (agile gracile opossum): 123241118
Entry
123241118         CDS       T07702                                 
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2-like
  KO
K17908  autophagy-related protein 18
Organism
gas  Gracilinanus agilis (agile gracile opossum)
Pathway
gas04136  Autophagy - other
gas04140  Autophagy - animal
gas05010  Alzheimer disease
gas05014  Amyotrophic lateral sclerosis
gas05016  Huntington disease
gas05017  Spinocerebellar ataxia
gas05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:gas00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    123241118
   04136 Autophagy - other
    123241118
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    123241118
   05014 Amyotrophic lateral sclerosis
    123241118
   05016 Huntington disease
    123241118
   05017 Spinocerebellar ataxia
    123241118
   05022 Pathways of neurodegeneration - multiple diseases
    123241118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gas04131]
    123241118
   03029 Mitochondrial biogenesis [BR:gas03029]
    123241118
Membrane trafficking [BR:gas04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    123241118
Mitochondrial biogenesis [BR:gas03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    123241118
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 BCAS3_WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd DUF7165 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_Vps41 RMC1_N Beta-prop_IFT140_1st VID27
Other DBs
NCBI-GeneID: 123241118
NCBI-ProteinID: XP_044524758
LinkDB
Position
3:87709073..87710253
AA seq 369 aa
MNLASQSGEAGSSQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEECLY
IHNIRDIKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKIFEFRRVVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLETVKEKPQEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICSLATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHNLFKE
IEEEKFFLD
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgaacctggccagtcagagcggggaggccggctccagccagctgctcttcgccaacttc
aaccaggacaacacatccttagctgttgggagtaaatctggttacaaattcttctccctt
tcttctgtggataagctggaacagatttatgaatgtactgatacagaagacgtgtgtatt
gtggaaagattgttttcaagtagcctggtggccattgttagcctcaaagctccacgaaaa
ctaaaagtctgccactttaagaaggggactgaaatatgcaattatagctattccaataca
atattggcagtcaaattgaatagacagaggttgatagtatgcctagaagaatgtctatac
atacacaatattcgtgatataaaggtactgcatacaatcagggaaactcccccaaaccct
gcaggtttgtgtgcactgtcaataaacaatgacaactgttacttggcttatcctgggagt
gcaactattggagaagtacaagtctttgacaccattaatttgagggctgctaatatgata
ccagctcatgatagtcccctagcagctttggcttttgatgcaagtggtaccaaacttgcc
acagcttctgagaagggaactgttattagagtattttccattccagaaggacagaaaatc
tttgagttccggagagtagtaaagaggtgtgtaagcatctgctctttggccttcagcatg
gatggaatgttcctctctgcttccagtaacactgaaacagtgcacatcttcaaacttgag
actgtgaaagagaaacctcaggaggaacccactacctggactggttactttgggaaagtt
cttatggcctctactagctatttgccctcccaagtaacggaaatgtttaaccagggaaga
gcatttgctactgtcagactaccattctgcggtcacaaaaatatctgttcacttgccaca
attcagaagattccccgattattagtaggagcttctgatggttacttatatatgtacaac
ctggatcctcaggaaggaggggaatgcaccctgatgaaacaacacaaccttttcaaagaa
atagaggaggaaaaatttttcctagactga

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