Gracilinanus agilis (agile gracile opossum): 123241459
Help
Entry
123241459 CDS
T07702
Name
(RefSeq) sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
123241459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gas04040
]
123241459
Ion channels [BR:
gas04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123241459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
Na_trans_cytopl
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
123241459
NCBI-ProteinID:
XP_044525039
LinkDB
All DBs
Position
3:257940397..258078844
Genome browser
AA seq
1412 aa
AA seq
DB search
MEQTVLVPPGPDSFNYFTRESLAAIEQRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKS
LPFIYGDIPPGMVSEPLEDLDPYYINKKGTTTETEIKKRRSSSFHVSMDFLEDPTQRQRA
MSIASILTNTVEELEESRQKCPPCWYKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLA
ITICIVLNTLFMAMEHYPMTPHFNNVLSVGNLVFTGIFTGEMFLKIIAMDPYYYFQEGWN
IFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNL
TLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAPNCELPRWHMHDFFHSFLIVFRVLCGEWI
ETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQ
IAVDRMHRGVAYVKRKLYEFIQQAFVRKQKVLDEIKPLDDLNNKKDSCMSNHTTEAGKDL
DYLKDANGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFS
SESDLEESKEKLNESSSSSEGSTVDIGLPEEEQPVAEPEEALEPEACFTEGCVRRFKCCQ
VSVEEGRGKQWWNLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLE
YADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF
YHCVNTTTGDMFDPSEVYNRSQCFELIERNETARWKNVKVNFDNVGFGYLSLLQVATFKG
WMDIMYAAIDSRNVELQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKF
GGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICL
NMVTMMVETDDQSEEMTSILSRINLVFIVLFTGECVLKMISLRHYYFTIGWNIFDFVVVI
LSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPI
LNSGPPDCDPQKVHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVAT
EESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALDPPLNLPQPNKIQLIAMD
LPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKASYEPITTTLKRK
QEEVSAVIIQRAYRRHLLKRTVKQASFTYNKNKIKGGANLLVKDDILIENSITEKTDLTM
STAACPPSYDRVTKPILEKHEREDKDDKAKGK
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgatagcttcaactacttcaccagagaa
tctcttgcagctattgaacaacgcattgcagaagagaaagctaagaatccaaaaccagac
aagaaagatgacgatgagaatggcccaaagccaaatagtgacttggaagctgggaagtcc
cttccatttatttatggagacattccacccggaatggtgtctgagcccttggaggacctg
gacccatattatatcaataaaaaaggcacaactactgaaacagaaattaaaaagagaagg
tcgagttctttccatgtttccatggattttctggaagatcctacccaaagacaaagagca
atgagtatagccagtatattaaccaataccgtggaagaacttgaagaatccagacagaag
tgcccaccctgctggtataaattttccaatattttcttaatctgggactgttccccacac
tggttgaaagtaaaacacattgtcaatctaattgtgatggatccatttgttgacctggca
attaccatctgcattgtcttaaatactttgttcatggccatggaacattatccaatgact
cctcatttcaataatgtactttcagtaggaaacttggtatttactgggatcttcacagga
gaaatgtttctgaagattattgccatggacccctattattattttcaagagggttggaat
atatttgatggttttattgtgacacttagcttagtggaacttggactggcaaatgtggaa
ggattatctgttctccgatctttcagactgcttcgagttttcaagttggcaaaatcttgg
ccaacactaaatatgctgataaagatcattggcaactcagtaggagctctgggaaacctg
accttggtgttggccattattgttttcatttttgctgtggttggcatgcagctctttggt
aaaagctacaaagactgtgtctgcaagattgcccctaactgtgaacttccacgctggcac
atgcatgactttttccactccttcttgattgtgttccgggtgctgtgtggagaatggata
gagactatgtgggactgtatggaagttgctggtcaggccatgtgtcttactgtcttcatg
atggtcatggtgattgggaacctggtggtcctgaatctgtttctggccttattactaagt
tcatttagtgcagacaaccttgctgccacagatgatgataatgaaatgaacaacctccag
attgctgtggatcgaatgcatcggggagtagcttatgtgaaaaggaaactatatgaattc
attcaacaggcctttgttagaaaacagaaggttttagatgaaatcaaaccactcgacgat
ctgaacaacaagaaggacagttgcatgtccaatcacacaactgaagcaggcaaagatctt
gattatctgaaagatgccaatgggactacaagtggcatcgggacaggcagcagtgtggaa
aaatacataattgatgaaagtgactacatgtcattcataaataaccccagcctcacagtg
acagtaccaattgctgttggagaatctgacttcgaaaatttaaacacagaagacttcagc
agtgaatcggatctggaagaaagcaaagagaaacttaatgaaagcagcagctcctctgaa
ggcagcactgtagacatcggccttcctgaagaggaacagcctgtagctgaacctgaggaa
gccctcgaacctgaagcctgtttcaccgaaggctgtgtacgaaggttcaaatgctgtcaa
gtgagtgttgaagaaggcagaggaaaacagtggtggaacctgagaaaaacctgtttcagg
atagtggaacataactggtttgagactttcattgttttcatgattctcctcagtagtggt
gctctggcatttgaagacatttatattgaacagcgaaaaactattaaaatcatgttggaa
tatgcagacaaagttttcacttatatcttcattctagaaatgcttttaaagtgggtggca
tatggctatcaaacttatttcactaatgcctggtgttggttagactttttgattgttgat
gtttctttggttagtttaacggcgaatgccttgggctactcagaacttggtgccattaaa
tccctcagaacactaagagctctgagacctcttagagccctatcaagatttgagggaatg
agggtggttgtgaatgcccttttaggagccattccctccatcatgaatgtgcttctggtt
tgtcttatattctggctaattttcagcatcatgggagtcaatctgtttgctggcaagttc
taccactgtgtaaataccacaactggtgacatgtttgatccctcagaagtctataatcgt
tctcagtgttttgaacttatagaaagaaatgagactgcccggtggaaaaatgttaaagtg
aactttgataatgtaggatttgggtatctctctttacttcaagtagccacatttaaagga
tggatggacattatgtatgcagctattgactcaagaaatgtggaactacagcccaaatat
gaagacaacctttacatgtatctttactttgttattttcatcatctttgggtcattcttc
actttgaatctgttcattggtgtcatcattgataatttcaatcaacaaaaaaagaagttt
ggaggccaagatatcttcatgacagaggaacagaagaaatactacaatgcaatgaaaaaa
ttggggtccaagaaaccacaaaagccaataccaaggccagggaacaaattccagggaatg
gtctttgattttgtaaccagacaagtctttgatatcagcatcatgattctcatctgtctt
aacatggttaccatgatggtggagactgatgatcagagtgaagaaatgactagcattctg
tcccggattaaccttgtgtttatagtcctcttcactggagaatgtgtactgaagatgatc
tccctccgccattactacttcaccataggatggaacatttttgattttgtggtggtcatc
ctttccattgtaggtatgtttctagcagagctgatagaaaaatattttgtgtcccctacc
ctatttcgagtgatccgtcttgccaggattggacgaatcctccgtcttatcaaaggagca
aaggggatccgcacacttctctttgctttgatgatgtccctccctgctctgttcaacatc
gggctcctgctcttcctggtcatgtttatctatgccatctttggaatgtccaactttgcc
tatgtcaaaagggaagttggaatcgatgacatgttcaactttgagacctttggcaacagc
atgatctgcctcttccaaatcaccacatctgctggttgggacggtttgctcgcacccatt
cttaacagtggacccccagactgcgaccctcaaaaagttcaccctggaagctcagtcaaa
ggagattgtggcaacccctctgttgggattttcttttttgtcagttatatcatcatctca
ttcctggtggtggtaaacatgtacattgctgtgatcctggagaacttcagtgttgctact
gaagaaagtgctgagccgctgagtgaggatgactttgagatgttctatgaggtttgggag
aagtttgaccccgatgcaacccagttcatggaatttgaaaaactttctcagtttgcagct
gcactggatccgcctctcaatttaccacaaccaaacaaaattcagcttattgccatggat
ctgcccatggtaagcggggaccgaattcactgccttgacatcctatttgcttttacaaaa
cgtgttttaggagagagtggagagatggatgctctccgaatacagatggaagagaggttc
atggcttccaatccttctaaggcttcctatgagccaatcaccacaacactgaagcgaaag
caagaggaagtatctgctgttatcattcaacgggcttacagacgtcaccttttaaagcga
acggtaaaacaagcctcatttacttataacaaaaataaaatcaaaggtggggcaaatctc
ctggtgaaagatgacattcttattgaaaactctatcacagaaaaaacagatctgaccatg
tccacagcagcttgcccaccttcctatgaccgagtaacaaaaccaatcctggagaaacat
gaaagagaagacaaagatgacaaggccaaaggaaagtaa
DBGET
integrated database retrieval system
