Gracilinanus agilis (agile gracile opossum): 123242032
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Entry
123242032 CDS
T07702
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123242032 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123242032 (DHX36)
03012 Translation factors [BR:
gas03012
]
123242032 (DHX36)
Enzymes [BR:
gas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123242032 (DHX36)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123242032 (DHX36)
Translation factors [BR:
gas03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123242032 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NACHT
AAA_23
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-GeneID:
123242032
NCBI-ProteinID:
XP_044525462
LinkDB
All DBs
Position
3:complement(653160061..653216210)
Genome browser
AA seq
990 aa
AA seq
DB search
GGGGYGGNRGGGGGRGGGGGGSGGGRGRHPGHLKGRDIGLWYARKQGQKSKDAERQERAV
VRMDERREEQIVQLLNSVQTKNDKDSQPQISWFSPEDHGYGAEVPVQNKPTSENKFLEKE
KKTLDQEKKFIDRGKKLTDMGKSFVDRDSEYLLQENEPDVDLDQQLKEDLKRKKSDPRYI
EMQHFREKLPSYGMQKELVNLINNNQVTVISGETGCGKTTQVTQFILDDYIERGKGSACR
IVCTQPRRISAISVAERVAAERAEPCGGGHSTGYQIRLQSRLPRKQGSILYCTTGIILQW
LQSDQQLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSEYF
DHSPMIHIPGFTFPVAEYLLEDVIEKIRYMPENTDRKPQFKRGFMQGHVNRPEKEEKETI
YKERWPDYVRQLRGRYSANTIDVLEMMDDDKVDLNLVAALIRHIVLEEEDGAILVFLPGW
DNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSI
TIDDVVHVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGL
RASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSHDAVLLSINHLMELN
ALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKE
KVADARRKELSKNTKSDHLTVVNAFEGWEEARRRGFRFEKDYCWEYFLSSNTLQMLHNMK
GQFAEHLLAAGFVSSKNPKDPKSNINSDNEKIIKAVICAGLYPKVAKIRPSFSKKRKMVK
VCTKTDGTVNIHPKSVNVEESEFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDIS
IQKDKDQETIAVDEWIVFQSPARIAHLVKELRKELDALLQEKIENPHPVDWKETQSRDCA
VLSAILDLIKTQENGTPRNFSPRFQDGYYS
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
ggcggcggcgggtacggggggaaccgcggcgggggcggaggccggggcggcggcggcgga
ggcagcggcgggggccggggccggcatcccgggcatctcaagggccgcgacatcggcctg
tggtacgcgaggaagcaggggcagaagagcaaggatgccgagcgccaggagagagctgta
gtgcgtatggatgaacgtcgagaagaacaaattgtgcaactgttgaattctgtccaaact
aagaatgacaaagattctcagccacaaatatcctggttttctcctgaggatcatggatat
ggtgccgaagttcctgtccagaacaaaccaacttcagaaaataaatttttggaaaaagaa
aagaaaactttggaccaagaaaagaaattcatagatcgagggaagaaattgactgacatg
ggaaagtcatttgtagatagagattctgaatatctcctgcaagagaatgagccagatgtg
gatttagaccagcaactcaaggaagacctaaaaagaaagaagtctgatcctcgctatatt
gaaatgcagcatttccgggagaagctgccctcatatggaatgcaaaaggaattggtaaat
ttgataaataacaatcaggttactgtcataagtggcgagactggttgtggaaaaaccacc
caagttactcagttcattctagatgactatattgaaagaggaaaaggatctgcttgccgg
atagtgtgtacacagccaagaagaatcagtgcaatttcggttgcagagagagtggccgca
gagagagctgagccatgtggcggcggccatagtactggataccagatccgcctgcagagc
cggttgccaaggaaacaaggttccattttgtattgtacaacaggaatcatccttcagtgg
ctccaatcagatcagcaattatccagtgttagtcacattgtacttgatgaaatccatgaa
aggaatctgcagtcagatgttttaatgactgttattaaagatctcctaaactttcgacct
gacctgaaagtaattctgatgagtgcaactttgaatgctgagaagttttcggaatatttt
gatcacagcccaatgatacacatacctggttttacattccctgttgctgagtatctttta
gaagatgtgattgaaaagataaggtatatgccagaaaatacagatcgcaaaccccaattt
aaaagaggttttatgcaaggtcacgttaatagaccagaaaaagaagagaaggaaacaatt
tacaaggaacgctggccagactatgtaaggcagctgcgaggaaggtattcggcaaatacc
atagatgttttagagatgatggatgatgataaagttgatctgaatttagttgctgcactt
attcgacacattgttttggaagaagaggatggtgcaatcttggtattcctcccaggctgg
gacaacatcagcactttacatgatctcttgatgtcacaagtcatgtttaaatcagatagg
ttcattataatacctttgcattcattgatgcctactgttaaccagacacaggtatttaaa
agaacccctcctggtgttcggaaaatagtcattgctacgaacattgcagaaactagtatc
accatagatgatgttgttcatgtgattgatggtgggaagataaaagaaacccactttgac
acccaaaataacatcagtacaatggcagcagaatgggttagtaaggcaaatgccaagcaa
aggaaaggacgagctgggagagttcagccaggtcactgttaccatctatataatggtctt
cgagccagccttctagatgactatcagttaccagaaattttgaggacaccattagaagaa
ctttgtttacagataaagattttaagactgggtggaattgcttatttcctaagcaggtta
atggatccaccatctcatgatgctgttttattgtctataaatcacctaatggaattgaat
gctttggataagcaagaggaactgacccctcttggagtccatttggcacgattgccagtt
gagccacatattggaaaaatgattctctttggggcccttttctgctgtttggatccagtg
ctcaccattgcggcgagtctcagcttcaaagacccctttgtcattccactgggcaaagag
aaagtagcagatgcaaggagaaaggaattgtccaagaacacgaaaagtgaccacttgacg
gttgtgaatgcttttgagggatgggaagaggcgaggaggcgtggtttccggtttgaaaag
gactattgttgggagtatttcctctcctcaaacacacttcagatgctgcacaacatgaag
ggacagtttgccgagcaccttcttgcagctggattcgtgagcagcaagaaccccaaagat
cccaaatcaaatattaattcagataatgaaaagataattaaagctgttatctgtgctggc
ttatatcccaaagttgctaaaatccggccaagttttagtaaaaaaaggaaaatggtgaaa
gtttgcaccaaaactgatggaacagttaacattcatcccaaatctgttaatgtggaagaa
tctgagttccattataactggctgatctatcacctgaagatgagaacaagcagcatctat
ctgtatgactgcacggaggtgtctccctactgcctcttgttctttggaggtgacatttcc
atccagaaggataaagatcaagagactattgctgtggatgagtggatcgtcttccagtct
ccagcaagaattgcccatcttgttaaggagctaagaaaagaacttgatgcccttttgcaa
gaaaagattgaaaaccctcatcctgtggattggaaagagactcaatccagagactgtgct
gtgctgtccgctattctagacttgatcaaaactcaggaaaatgggacgcccaggaacttt
tctccacgattccaggatggatactacagttga
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