Gracilinanus agilis (agile gracile opossum): 123242320
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Entry
123242320 CDS
T07702
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123242320 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gas04147
]
123242320 (COPB2)
Membrane trafficking [BR:
gas04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
123242320 (COPB2)
Exosome [BR:
gas04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
123242320 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
123242320
NCBI-ProteinID:
XP_044525917
LinkDB
All DBs
Position
3:327300559..327334292
Genome browser
AA seq
913 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLESCLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFIVEEYVKETHTALRPAKEYPLVTPNEERNVTEEAK
GFQPSGIMMTQEFDEEEPTSPAPVIVNAVLASSEPVPTTKEEKSLLELDDLDNLDLEDID
TTDINLDEDILDD
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttagacttgatatcaagaggaagctaactgctcgatctgatcgagttaagagc
gttgatttgcatcctacagagccatggatgttggctagtctttacaatggcagtgtctgt
gtttggaatcatgaaacacagactctggtgaagacatttgaagtatgtgatcttcctgtt
cgagctgcaaaatttgttgcaaggaagaattgggtagtaacaggagcggatgatatgcaa
attcgagtcttcaattataacactttggagagagttcatatgtttgaagcacactcagac
tatattcgttgtattgctgtacatccaactcagcctttcattctaactagcagtgatgac
atgctcattaaactatgggattgggataaaaaatggtcttgctcacaagtgtttgaagga
catactcactatgttatgcaaattgtcataaaccctaaggataacaaccagtttgccagt
gcctctttggatagaactatcaaggtatggcagcttggttcttcctcacctaactttact
ttggagggacatgagaaaggagtgaattgcattgattactatagtggtggtgacaaacca
tatctcatttcaggagcagatgaccgccttgttaaaatatgggactaccagaataaaaca
tgtgtgcaaacactagaaggacatgctcagaatgtgtcttgtgccagttttcatcctgag
ttgccaatcatcatcacaggttcagaagatggaacagttcgtatttggcattcaagtacc
taccgtctggaaagcacattaaactatggaatggagagagtgtggtgtgtggccagtctc
agggggtccaataatgttgctttgggatatgatgaaggcagtatcattgttaagcttggc
cgagaagagcctgctatgtccatggatgccaatggaaagattatttgggcaaagcactct
gaagtccaacaggccaatctgaaagcaatgggagatgctgaaattaaagatggagaaaga
ttgccccttgcagtcaaagatatgggaagttgtgaaatatatcctcagaccattcagcat
aaccctaatggacgatttgttgtggtgtgtggtgatggtgaatatatcatctatacagca
atggcacttagaaacaagagctttggttcagcacaagagtttgcttgggctcatgattct
tcagagtatgcaataagagaaagcaacagtgtagtgaagatatttaagaactttaaagaa
aaaaaatcatttaagcctgattttggcgctgaaggtatctatggaggtttcttactggga
gtcagatctgtaaatggcttagcattctatgactgggaaaacacagaactgatacgcaga
attgaaattcagcccaaacatatcttttggtctgactctggtgagctggtctgcattgcc
actgaggaatcattctttatccttaagtatctgtctgaaaaagttttagctgcacaggaa
acacatgagggagttactgaagatggcattgaagatgcctttgaggtccttggggagatt
caggagattgtcaaaactggcctgtgggtaggcgattgttttatttacacaagttctgta
aaccgattaaattattacgttggaggagaaatagtcaccattgcccatttggacagaaca
atgtacctgctgggttatattcctaaggacaacagactttatctgggtgataaggagctg
aacattgttagttattctttgttggtgtcggtgctagaataccagacagctgtaatgagg
agagactttagcatggctgacaaagtcctccctaccattccaaaagaacagaggaccaga
gttgcccacttcctggaaaaacagggcttcaaacagcaagctcttgcggtatctacagat
cctgaacatcgatttgagttggctcttcagcttggagagttgaaaattgcataccagttg
gcagtagaagcagagtcagaacagaagtggaaacaacttgccgaacttgccattagtaaa
tgccagtttggcttagcccaggagtgtctgcatcatgcacaagattatggaggtttgttg
cttttggccactgcatcaggaaatgctagtatggtgaataaactagcagagggtgctgag
agagatggcaagaacaatgtcgcgtttatgagctattttctacagggaaagcttgagtct
tgtctggaactcttgattagaactggacgtttgcctgaagctgctttcttagctcggaca
tatttaccaagtcaggtttcaagggtggtcaaactgtggagagagaatctctcaaaagtc
aatcagaaagcagctgaatcccttgctgatcccacagagtatgaaaatcttttccctggg
ttgaaagaagcctttattgttgaagaatatgtgaaggaaacccatacagcccttcgacct
gccaaagaatatccactcgtcactccaaatgaagaaagaaatgtgacagaagaagctaaa
ggctttcaaccctcaggaattatgatgacccaggaatttgatgaagaggaaccaacttct
cctgctccagtcatagtgaatgcagttctagcaagttcagaaccagtcccaactacaaaa
gaggaaaagagtctacttgaattggatgatttggataacttggatctagaggatattgac
acaacagatatcaatttagatgaagacattttggatgactga
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integrated database retrieval system
