Gracilinanus agilis (agile gracile opossum): 123242392
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Entry
123242392 CDS
T07702
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog isoform X1
KO
K04638
intraflagellar transport protein 57
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas05016
Huntington disease
gas05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
123242392 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
123242392 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gas03037
]
123242392 (IFT57)
Cilium and associated proteins [BR:
gas03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
123242392 (IFT57)
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Gene cluster
GFIT
Motif
Pfam:
IFT57
MCPsignal
Mod_r
COG3_N
DUF1664
Motif
Other DBs
NCBI-GeneID:
123242392
NCBI-ProteinID:
XP_044526040
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Position
3:360888968..360968184
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AA seq
431 aa
AA seq
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MAVAAAVVPPVSVEETVLRARGGDASGEGLYVERGPGAAYHMFVVMEDLVEKLKLLRYEE
EILRRNNLKPLSRHYFALPTNPGEQFYMFCTLAAWLINKAGCPFEQPQEYDDPNATISNI
LSELRSFGRSADFPPSKLKSGHGEHVCYVLDCLAEEALKYVGFSWKRPVYPVEELEEETV
PEDDAELTVNKVEEEIVEEETDNEENFIDLNVLKAQTYRLDMNESAKQEDILESTTDAAE
WNLEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSEIESALKETKGFLDKLHNEISRTLE
KISSREKYINNQLEHLVQEYRAAQAQLSEARERYQQGNGGVTERTRILSEITEELEKVKQ
EMEEKGSSMTDGAPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKSNMTRDMHA
TIIPESAIGSY
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggccgcggccgtggtgccgccagtaagcgtggaggaaacggtgcttcgggcc
cgtggcggggacgcgagcggagaaggcctgtacgtggaacggggccccggcgcggcctac
cacatgttcgtggtgatggaagaccttgtggagaagctaaagctgctgcgctacgaagag
gagatcctgcgcagaaacaacttgaaaccgctgtccagacattattttgctttgcctacc
aatccaggtgaacagttttacatgttttgcactcttgctgcttggctaattaataaagca
ggatgcccctttgaacaaccacaggaatatgatgaccccaatgcaacaatatctaatata
ttatctgagcttcgatcatttggaaggtctgcagattttcctccatcaaagttaaagtca
ggtcatggagagcatgtatgctatgttcttgattgtttagctgaagaagccctaaaatat
gttggtttcagttggaaaaggccagtatacccagtagaagaattagaagaggaaacagtt
ccagaagatgatgcagaattaacagtaaataaagttgaggaagaaattgtggaagaggag
actgacaatgaagaaaactttattgatctcaatgttttaaaggcacagacctaccgattg
gatatgaacgagtctgccaaacaagaagatattttggaatctacaacagatgctgcagaa
tggaatctagaagtggaacgtgtactaccacaactgaaagtcacgattcgaactgataat
aaggactggaggatccacgttgaccaaatgcatcaacacaaaagtgaaattgagtctgct
ttaaaagagacaaaaggatttttggacaaactccataatgagatcagtagaaccctggaa
aagatcagcagtcgagaaaaatacatcaacaatcagcttgagcatttggttcaagagtat
cgtgctgctcaagcccagctgagtgaggcaagagaaagataccagcagggaaatggcgga
gtaactgaaagaactagaatcctttctgagattacagaagaattagaaaaggtaaaacag
gaaatggaagaaaagggcagcagtatgactgatggtgctcctttggtaaagattaaacag
agcttaaccaaactgaagcaagaaacagtccaaatggacattagaattggagtagtggaa
cacacattactccagtcaaaactaaaggagaagtcaaatatgactagggatatgcatgca
acaatcattccagaatctgcaataggttcttattaa
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