Gracilinanus agilis (agile gracile opossum): 123242432
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Entry
123242432 CDS
T07702
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04622
RIG-I-like receptor signaling pathway
gas05161
Hepatitis B
gas05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
123242432 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
123242432 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
123242432 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123242432 (DDX3X)
03041 Spliceosome [BR:
gas03041
]
123242432 (DDX3X)
03036 Chromosome and associated proteins [BR:
gas03036
]
123242432 (DDX3X)
Enzymes [BR:
gas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123242432 (DDX3X)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123242432 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
123242432 (DDX3X)
Spliceosome [BR:
gas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123242432 (DDX3X)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123242432 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123242432
NCBI-ProteinID:
XP_044526110
LinkDB
All DBs
Position
3:401213532..401230129
Genome browser
AA seq
679 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGGTASKGRYIPPHLRNREASKGFYDKDSSGW
NSGKDKDAYSSFGSRSDTRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRGGFGKFE
RSGNSRWSDKSDEDDWSKPLPPSDRLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYTDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPQKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEEADKRSFLLDLLNATGKENYDEFQHSSGGSGKDSLTLVFVETKKGADSLEDFLYHEG
YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEY
VHRIGRTGRVGNLGLATSFFNDRNINITKDLLDLLVEAKQEVPSWLESMAYEHHYKGSSR
GRSKSSRFSGGFGARDYRQSSGASSSSFSSSRASSSRSGGGGGGHGSSRGFGGGGYGGFY
NSDGYGGNYNSQGVDWWGN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggagaatgcgctcgggctggatcagcagtttgctggcctagac
ctgaattcttcagataatcagagtggaggaggtacagcgagcaaaggacgttatattcct
cctcatttaaggaacagagaagcttctaagggattctacgataaagatagttcggggtgg
aattctggtaaagataaggatgcatatagcagttttggctcccgtagtgatacaagaggg
aagtccagtttcttcagtgatcgtggaagtggatcaagaggaagatttgatgatcgtgga
agaagtgactacgatggcattggcagtcgtggtgacagaggtggttttggcaaatttgaa
cgaagtggtaatagtcgatggtctgataagtcagatgaagatgactggtctaaaccactt
ccaccaagtgatcgcttggagcaggaactcttctctggaggaaacactggaattaatttt
gagaaatatgatgacattcctgttgaggcaacaggcaacaactgtcccccacacattgaa
agttttagcgatgttgaaatgggagaaattatcatgggtaatattgaacttactcgttat
actcgtcctactccagtgcagaaacatgctattcctattatcaaagaaaagagagacttg
atggcttgtgcccaaacaggatctgggaaaactgctgcatttcttctgccaattttgagt
caaatttatacagatggcccaggcgaagcattgagggctatgaaggaaaatggaaggtat
ggacgtcgcaaacaatacccaatctccctggttttagcaccaacaagagaactggctgta
cagatctatgaggaagcaagaaagttttcatatcgatccagagttcgcccatgtgtagtc
tatggtggcgctgatattggtcagcagattcgagacttggaacgtggatgtcacttactt
gtggcaactccaggacgtcttgtagatatgatggaaagaggaaagattggcttagatttt
tgcaagtatctagtgttggatgaagctgatcgtatgcttgatatggggtttgaacctcaa
attcgtcgtatagttgagcaagatactatgccacaaaagggagttcgccacactatgatg
tttagtgctactttccccaaggaaatacagatgcttgctcgtgacttcttggatgaatat
atctttctggctgtaggcagagttggctctacttctgagaacatcacacagaaagtagtg
tgggtggaagaagcagacaaacggtcatttcttcttgacctcctaaatgccacaggtaaa
gaaaattacgacgaatttcagcacagctctggtggctcaggcaaagattcactgacctta
gtgtttgtggagaccaaaaagggggcagattccttagaagatttcttataccatgaagga
tatgcttgtaccagtatccatggagacagatctcagagagatcgagaagaagcacttcac
cagttccgctcaggaaaaagcccaattttagtagctacagctgtagcagcaagaggactg
gatatttcaaatgtgaaacatgtcataaactttgatttgccgagtgatattgaagaatat
gtacatcgaattggtcggacaggtcgtgttggaaaccttggtcttgccacttcattcttc
aatgacaggaacatcaatattaccaaggacttgctggatcttcttgttgaagccaaacaa
gaagtgccatcatggctagaaagtatggcttatgaacatcactataagggtagcagtcgt
ggacgttctaagagtagtagattcagtggaggtttcggtgccagagactatcgacaaagt
agtggtgccagcagttctagctttagtagtagtcgagcaagcagcagccgcagtggtggt
ggaggtggtggtcatggcagcagcagaggatttggtggaggtggctatggaggcttctac
aacagtgatggatatggaggaaattataactcccagggggttgactggtggggtaattga
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integrated database retrieval system
