Gracilinanus agilis (agile gracile opossum): 123242517
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Entry
123242517 CDS
T07702
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04360
Axon guidance
gas04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123242517 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
123242517 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gas04515
]
123242517 (ROBO1)
Cell adhesion molecules [BR:
gas04515
]
Immunoglobulin superfamily
ROBO family
123242517 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_PDGFR_d4
Unc5_NetrinR_N
Ig_J_second
Fn3_Dep-1_3rd
Big_4
Motif
Other DBs
NCBI-GeneID:
123242517
NCBI-ProteinID:
XP_044526258
LinkDB
All DBs
Position
3:complement(428936724..429951309)
Genome browser
AA seq
1658 aa
AA seq
DB search
MAVLSLMLLLWMAEITSTVGVSGRMKAGSRWKGEKNHSEDLERGTDNGTPLPTSDNDDNS
LGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKD
DSRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYICVARNYLGEAVSHNASLEVAILRDDFR
QNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSSLDDRDERITIRGGKLMITYTRKS
DAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTV
RWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVVSEP
PHFVVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYHPPQSSSRFSVSQT
GDLTIINVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPGNQTVAVDG
TLVLSCVATGSPLPTILWRKDGVLVSTQDSRIKQLETGALQIRYAKLGDTGRYTCIASTP
SGEATWSAYIEVQEFGIPVQPPRPTDPNLIPSAPSKPEVTDVSKNTVTLSWQPNLNSGAT
PTSYIIEAFSHASGSSWQTVAENVKTETFATKGLKPNAIYLFLVRAANAYGVSDPSQISD
PVKTQDIPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKIL
YRPSGANHGDSEWLVFEVRTPTKNSVVIPELKKGVNYEIKARPFFNEFQGADSEIKFAKT
LEEAPSAPPQSVTISKNDGNGTAILVTWQPPPEDTQNGMVQEYKVWCLGNESRYHINKTV
DGSTFSVIIPSLVPGVRYSVEVAASTGAGSGVKSEPQFIQLDSYGNPVSPEDQVSLAQQI
SDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQ
RGGEAVSSGGRPGLLNINEPVTQPWLADTWPNTGNNHNDCSINCCTASNGNSDSNLTTYS
RPADCIANYNNQLDNKQTNLMLPEPTVYGDVDLSNKINEMKTFNSPNLKDGRFVNASGQP
TPYATTQLIQSNISNNINNGNGDSNEKHWKPSSQQKQEVASIQYNIMEQNKLNKDYRTND
TIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKLPKQTGMNWADLLPPPP
AHPPPHSNSEDYSLSVDESYDQEIPCPVPPARMYLQQDELEEEDERGPTPPVRGAASSPA
AVSYSHQSTATLTPSPQEELQPMLQDCPDDIGHMQHQPDRRRQPVSPPPPPRPISPPHTY
GYISGPLVSDMDTDVPEEEEDETDMEVAKMQTRRLLLRGLEQTPASSVGDLESSITGSMI
NGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDATGRRN
FHASQCPRPTSPVSTDSNMSAAIMQKVRPAKKQKHQAGHLRREVYTDDLPPPPVPPPAIK
SPTVQSKGQLEVRPVILQKLPNVEARADRSSERKGGSYKGREALDGRQVSEMRTNPGDHR
DAQELQSDGKARGNKASKRELPPAKTHLVQEDILPYCRPTFPTSNNPRDPSSSSSMSSRG
SGRQRDQANIGRRNVAEMQVLGAYEKEVDNEELEETES
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgtcactgatgctgctgctctggatggcagaaataacttctactgtgggc
gtctcaggcagaatgaaagctgggtcaaggtggaaaggtgaaaaaaatcactctgaagac
ctagagagggggacggacaacgggacaccactccccacctctgataatgatgacaattcg
ctgggctacacaggttcccgtcttcgtcaggaggattttcctcctcgtattgttgaacat
ccttctgatctcattgtttctaaaggcgaaccagctactttgaactgtaaagcagaaggc
agacccacaccaactattgaatggtataaaggaggagaaagagtggaaacagacaaagat
gactctcgttcacaccggatgttacttccaagtggatctttatttttcttacgtatagta
catggacgcaaaagtagacctgatgaaggtgtctatatctgtgtagcacggaattatctt
ggagaagctgtgagccataatgcatcactggaggtagcaatactacgagatgacttcagg
caaaacccttcagatgtaatggtggcagtaggagagccagcagtgatggaatgccagcct
ccacgaggccatccagaacccactatttcttggaaaaaagatggatcatcattggatgat
agagatgaaagaattactatccgaggagggaagctcatgattacatatacacgtaagagt
gatgctggaaaatatgtttgtgttggaacaaatatggtgggagaaagagaaagtgaagta
gcagagctaacagttttagagagaccatcatttgtgaagagacctagtaacttggcagta
actgtggatgacagtgcagaatttaaatgtgaggcccgaggtgatcctgtacctacagta
agatggagaaaagatgatggagagcttcctaaatccagatatgaaatccgagatgatcat
accttgaaaatccgaaaggtaatggcaggtgatatgggatcatacacatgtgttgcagaa
aatatggttgggaaagctgaagcatcagcaactctgacagtacaagttgtgtctgagcct
ccacactttgttgtgaagcctcgtgaccaagttgctgcattgggacgaactgtaactttc
cagtgtgaggcaactggaaatcctcaaccagcgattttttggaggagagaaggaagtcaa
aacctgcttttttcataccatcctccacaatcttcaagccgattttctgtatcccaaact
ggtgatcttactatcataaatgtccagcgatctgatgtagggtactatatttgccagact
ttgaatgttgcaggaagcatcatcactaaagcctacttggaagttactgatgtgattgca
gaccggcctcccccagtcatacgacagggtcctgggaatcagactgtagcagtggatggt
accttagtcctcagctgtgtggccacaggcagtccattgccaacaattctgtggagaaag
gatggagtccttgtctccactcaagactctcgcatcaaacaactggaaacaggggcacta
caaatccgatatgccaagctgggtgacactggtcggtacacctgcattgcatcgactcct
agtggtgaagcaacatggagtgcatacattgaagttcaagaatttggaattccagttcag
cctccaagacccactgacccaaatttaatccctagtgccccatcaaaacctgaagtcaca
gatgtcagcaaaaatacagtaacattgtcatggcaaccaaatttgaattcaggtgcaact
ccaacatcttatataatagaagccttcagccatgcatctggtagcagctggcaaactgta
gcagaaaatgtgaagacagaaacatttgccactaaaggactaaaacctaatgcaatttac
ctttttcttgtgagagctgctaatgcatatggagttagtgatccgagtcaaatatcagat
ccagtaaaaacacaagatattccgccaacaagtcaaggtgtagatcacaagcaagtccag
agagaattgggaaatgttgttctgcaccttcataatcctaccatactttcttcttcttct
attgaagttcattggacggtggaccaacaatcccagtatattcaaggatacaaaattctc
tataggccctctggtgctaaccatggagactctgagtggctagtgtttgaagttaggacc
ccaacaaaaaatagtgttgtcatcccagagctcaaaaagggagtcaactatgaaattaag
gctcggcctttctttaatgaatttcaaggagcagatagtgaaatcaagtttgcaaaaacc
ctggaagaagcaccaagtgctccaccccagagtgtaacaatatcaaagaatgatggaaat
ggaactgcaattctagtaacttggcagccacccccagaagatacccaaaatggaatggtc
caagagtataaggtttggtgtctgggcaatgaaagtcgataccacataaacaagacagtg
gatggttctaccttttctgtaatcattccatctctagttcctggtgttcgatacagtgtg
gaagtagcagccagtacaggggcaggatctggtgtgaaaagtgagccacaattcattcag
ttagactcctatgggaatcccgtgtcaccagaggatcaagtcagtcttgctcagcagatt
tctgatgttgtgaagcagccagcatttatagcaggcattggagctgcttgttggataatc
cttatggtcttcagcatatggttgtatcgtcaccggaagaagagaaacggactcactagt
acttatgctggtataagaaaagtcccgtcttttaccttcacaccaacagtaacttatcag
agaggaggagaagcagtgagcagtggaggcaggcctggacttctcaatatcaatgaacct
gtcactcagccgtggctagcagacacttggcccaatactggaaataatcacaatgactgc
tcaatcaactgttgtacagcaagcaatggaaacagcgatagcaacctgacaacttatagc
cgcccagctgattgtatagcaaattacaacaaccagctggataacaaacaaacaaatctg
atgctgcctgagcctaccgtgtatggtgacgtggacctgagcaacaagatcaatgaaatg
aaaaccttcaatagtccaaacctgaaggatggccgatttgttaatgcatcagggcagccc
actccttatgccaccactcagctcatccagtcaaacatcagcaacaacattaataatggc
aatggagattccaatgagaaacactggaaaccctctagtcagcaaaagcaggaagtggca
tctattcaatataacattatggagcaaaacaaattaaacaaagattatcgaacgaatgat
accatcccaccaactattccgtacaatcaatcttatgaccaaaatactggaggctcctac
aacagttcagatcgaggcagtagtacatctgggagtcaagggcataagaagggtgccaga
acacccaagttaccaaaacagacaggcatgaactgggcagacctacttcctcctccccca
gcacatcctcctcctcacagcaatagtgaagactacagtctttctgtagatgagagctat
gaccaggaaattccatgtccagtgccaccagcaaggatgtatttacagcaagatgagcta
gaagaagaagatgaacgaggccctactccacccgtacgaggagcagcttcatctccagca
gcagtatcctatagccatcagtctactgccacacttacaccttcacctcaagaagaactt
cagcccatgttacaagattgcccagatgacattggccacatgcaacaccagcctgacagg
agacgtcagcctgtgagccctcctcctccaccaagaccaatttctccaccacatacctac
ggttacatttcaggacctcttgtgtcagatatggatactgatgtaccagaagaggaagaa
gatgaaactgacatggaagtagccaaaatgcaaaccagaaggcttcttttacgtggtctt
gaacagacccctgcttctagtgttggtgatttggaaagctctataactggctccatgata
aatggctggggttcagcctcagaagaagataacatttcaagtggacgttccagtgttagt
tcttctgatggctcattttttactgatgcagattttgcacaggctgttgcagcagcagct
gaatatgctggtcttaaagtggcaagacgtcaaatgcaggatgccacaggccgtaggaat
tttcatgcctcacagtgccctagacccaccagccctgtatctacagacagtaacatgagt
gctgctataatgcaaaaggtccgaccagccaagaaacaaaaacatcaagcaggacatctg
cgcagagaagtctacacagatgatcttcctcctcctccagtgccaccacctgctataaaa
tctcccactgtccaatctaagggacaactagaggtacgacctgtaatattgcaaaaactt
cccaatgtagaagcaagagcagacaggtcttcagaaagaaaaggaggtagctacaagggg
agagaagcattggatggaagacaagtttctgagatgaggacaaatccaggagaccacaga
gatgcacaagaactacaaagtgatggaaaagcaagaggaaacaaggcatcaaaacgagaa
cttccaccagcaaaaactcatcttgtccaagaagatatcctgccatactgtagacctaca
tttccaacatcaaataatcccagagatccaagttcttcaagctcaatgtcatcaagaggt
tcaggaaggcaaagagatcaagccaatataggtcgaaggaatgttgcagaaatgcaagtg
cttggagcatatgaaaaagaagtggataatgaagaattagaggaaactgaaagctaa
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integrated database retrieval system
