Gracilinanus agilis (agile gracile opossum): 123242630
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Entry
123242630 CDS
T07702
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04151
PI3K-Akt signaling pathway
gas04382
Cornified envelope formation
gas04510
Focal adhesion
gas04512
ECM-receptor interaction
gas04518
Integrin signaling
gas04820
Cytoskeleton in muscle cells
gas04926
Relaxin signaling pathway
gas04933
AGE-RAGE signaling pathway in diabetic complications
gas04974
Protein digestion and absorption
gas05146
Amoebiasis
gas05165
Human papillomavirus infection
gas05200
Pathways in cancer
gas05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123242630 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123242630 (COL4A2)
04518 Integrin signaling
123242630 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123242630 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123242630 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
123242630 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
123242630 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
123242630 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123242630 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
123242630 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123242630 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
123242630 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
123242630 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gas04147
]
123242630 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
gas00536
]
123242630 (COL4A2)
Exosome [BR:
gas04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123242630 (COL4A2)
Glycosaminoglycan binding proteins [BR:
gas00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123242630 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123242630
NCBI-ProteinID:
XP_044526468
LinkDB
All DBs
Position
3:complement(509568658..509842247)
Genome browser
AA seq
1646 aa
AA seq
DB search
MGSRMYPTAGLALWRCLLLFVLVGVLTKGAHAAAKKYDVPCGGRDCSGGCQCFPEKGARG
QPGPVGPQGYNGPPGLQGIPGLQGRKGDKGERGAPGITGPKGDVGQRGVSGFPGADGIPG
HPGQGGPRGRPGSDGCNGTTGDAGTQGPPGSGGLPGLPGPQGPKGQKGEPYAFSQADRDR
YRGDPGEPGFFGLQGPPGHPGNPGKMGPAGAPGRPGPPGPPGPKGQPGNRGLGFYGEKGE
KGDIGRAGPTGLPSDGDRATSIIDNVVDQPDQYKGEKGNWGEPGWKGYSEKGEEGIVGFP
GQRGWPGLNGEQGDPGQKGISGPAGFPGSDGIKGPWGDIGDRGPPGPPTYSRHPSIMKGV
KGEPGTPGARGPDGSPGEPGEPGQPGTSGLDGDERRGLPGEMGAKGFRGEPGFPALYPGP
PGRDGIPGPQGPPGPPGLPGPDGFLFGLKGAEGIVGFPGPLGIPGTRGQKGWKGDPGDCK
CGVPSVGHPGPPGPIGLPGTNGEPGRKGEIGDPGPHGIPGFSGFKGSTGTPGLPGPKGHK
GDSRTITTKGSRGDQGTPGIPGLEGEDGFPGQDGLDGFPGLPGLPGDGIKGIPGDAGFPG
LPGLKGTPGDIGPPGLGLPGPKGARGLPGDPGLSGSPGFPGPPGPPGTLGQTDCDADVKQ
PIGQEIIQPGCIRAPKGSPGLPGLPGSPGTKGQRGIPGFPGADGFVGLKGFQGDAGREGF
PGPPGFVGPRGSKGATGLPGLDGNPGSTGVPGAVGPAGQKGLPGEVLGAQPGFPGDSGLP
GVPGLKGEPGSRGPPGFRGSPGMPGMPGLKGQPGFPGPSGPPGLPGPPGIHGFPGPKGQE
GPPGLPGPLGFAGLPGDRGDRGDIGVPGPVGMKGLDGDRGDAGFIGEQGRTGEPGFQGIP
GMPGIPGPKGFKGSTGMDGFKGMLGIKGRPGIIGYKGEVGDFGIPGLKGLTGEPGLKGSR
GEPGPPGEPPKILPGMKDFKGEKGDEGPAGGKGSWGIKGGQGMPGIPGQTGIPGLPGIPG
QIKGVKGEIGIPGVPGLQGFPGQIGPPGIRGFPGFVGVRGDKGMPGREGLYGETGSIGDY
GDEGDTINLPGRPGVKGELGISGLGGEKGFTGEKGTSGDHGFIGLMGIKGSQGLPGLKGQ
TGFPGLTGLQGPQGDPGHAGPPGEKGDLGWPGVPGLSGFPGIRGISGLHGLPGTKGLPGS
PGADGFGNPGFPGPFGDKGERGEPNTIPGPLGAPGQKGERGAPGVQGPSGSPGIQGHPGF
TAPSNISGLPGDKGDPGLFGTQGYRGLPGTPGPSAPPGIKGEVGSPGFTGERGPKGWAGD
PGPQGRPGVYGLPGEKGPKGQQGLMGYHGIPGSSGDRGPKGPKGDRGFPGIPGTVGSPGI
PGIPLKIVSEPGVAGPHGRRGPPGVQGEMGPQGPPGDPGLRGLPGKPGPQGRGGMSALPG
FRGDQGLMGHPGPVGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMNK
LWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICHYASRNDKSYWLSTT
APLPMMPVAEEEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSFLMVCG
VFLPFFLWRRETARKWFASEPSERVT
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcagaatgtacccaactgccggacttgccctttggcggtgtctgctgctcttc
gtgctggtcggagtgctaactaagggagcacacgctgctgcgaaaaaatacgatgtgccc
tgtggaggaagagactgcagtggaggttgtcagtgctttcctgagaaaggagcacggggt
caaccaggaccagttgggccacaagggtataatggaccaccagggctacaaggtattcct
ggattacaaggacgcaaaggtgataaaggagaacggggagccccaggaataacaggaccc
aaaggagacgtgggacaaagaggtgtttctggatttcctggtgctgatggaattccgggt
catccaggtcaaggtggaccccgaggaagaccaggcagtgatggttgcaatggaaccact
ggagatgctggtacacaaggacctccaggttctgggggtttacctgggcttcctggacca
caaggaccaaaaggtcagaaaggcgaaccctacgcattttcccaggctgaccgagacaga
tacaggggcgatccaggtgaacctggttttttcggtttacaaggacctccaggtcatcct
ggcaatccaggaaaaatgggtcctgccggagcccctgggcgaccaggacctcctggacct
ccaggaccaaaaggacaaccaggcaacagaggccttggcttttatggagaaaaaggtgaa
aagggtgacatcggacgagcaggacccactggacttccatcagatggtgaccgagctact
tccattattgataatgtagtggaccaaccagaccaatataagggtgaaaaaggaaactgg
ggggagccaggctggaaaggatattcagaaaaaggtgaagaaggaatagtgggctttcca
ggacaacggggttggccaggccttaatggtgaacaaggagatccaggacagaaaggaatt
tcagggcctgctggatttccaggaagtgatggcattaaaggaccatggggagatataggt
gaccgaggtccccctggaccacctacatattcacgccacccctccataatgaaaggtgta
aaaggggagccgggaaccccaggggctcgcggccctgacggaagtccaggagaaccagga
gagcctggccagccaggcacatcaggattagatggagatgaacgaagaggccttccaggt
gaaatgggagccaaaggttttagaggcgagccaggtttccccgctctgtacccaggacct
ccaggtagagatggaataccaggacctcaaggaccaccaggacctcctggcctaccagga
ccagatggatttctttttggacttaagggagcagaaggaattgtgggtttcccaggccct
ttggggatcccagggacaagaggacaaaaaggatggaaaggtgaccctggagactgcaaa
tgtggagttccttctgtaggccatcctggtccaccaggacccattggtcttcctggtaca
aatggagaacctgggagaaaaggagaaattggtgatccaggtccgcatggtattcctggt
ttctcaggctttaagggtagcactggcactcctggattacctggtcctaaagggcataaa
ggagactctagaacaattacaacaaaaggtagcagaggtgaccaaggcactcctggtata
cctggtttggaaggtgaagacggctttccagggcaagatgggctagatggttttccaggt
cttccaggtcttcctggtgatggcatcaaaggtattccaggagatgcaggttttccagga
ctccccggtttaaagggcactccaggagacattggtcctccaggcctaggtctaccaggc
cccaaaggtgcacgaggcctccctggtgaccctggattaagtgggagtcctggcttccca
ggtcctccaggccccccaggcactctaggccaaacagattgtgatgcagatgtgaaacag
cccattggccaggagataattcaaccaggttgcataagagcccctaaaggatctccagga
ctgcctggactgccaggatctccaggtaccaaaggtcaaagaggaattccaggatttcca
ggtgcagatggatttgtggggctcaaaggatttcagggagatgcaggtcgagaaggattt
ccaggcccaccaggatttgttggacccagaggatccaaaggtgcaacagggcttcctggg
ctagatggaaacccaggcagtacaggagtaccaggagctgtaggacctgcaggacaaaaa
gggctacctggagaagtattgggtgcacagcctggtttcccaggagattctggattgcct
ggagtcccagggttgaaaggagaaccaggaagtagaggaccaccaggatttagaggaagc
ccaggaatgcccggaatgcctggtttgaaaggtcagcctggattcccaggtccttctggt
ccacctggattaccagggcctcctggaattcatggctttccaggacctaaaggccaagaa
ggaccaccgggtcttcccggcccattgggatttgcaggtctacctggtgatagaggggat
cgaggtgacattggagtccctggtcctgtggggatgaagggtctggacggagatagaggt
gatgctggtttcataggcgagcaaggcagaactggggaacctggatttcaagggatacct
ggaatgcctggcatcccgggaccaaaaggtttcaaaggatctactggtatggacggtttc
aaaggcatgttgggtatcaaaggaagaccaggaatcattggatataaaggagaggttggc
gattttggaattcctggtttgaaaggtctaactggtgaaccaggcttgaaaggtagccgt
ggagagccagggccaccaggagaacctccaaaaatcctgccaggaatgaaagacttcaaa
ggggaaaaaggagatgaaggacctgctggtgggaaaggatcttggggcataaaaggtgga
caaggaatgcctggcatccctggccagacaggaattcctgggttacctgggatacctggt
caaatcaaaggggtcaaaggtgaaatcggtattcctggagtacccggcttgcaaggattc
cctggccagatcggtccccctggtatcagaggctttcctggatttgtaggtgttaggggt
gacaagggtatgcctggacgagaaggactttatggtgagactggatctatcggagattac
ggtgatgaaggagacactataaatttaccaggaagaccaggggtgaaaggagaactgggc
atatctggccttggaggtgaaaagggattcaccggagaaaaaggcacatcaggagaccat
ggtttcataggattgatgggcataaaaggatctcaaggccttcctggactgaaaggacag
acaggttttccaggactgacaggactccaaggacctcaaggagaccccggtcatgctgga
cctcctggtgaaaagggagatttgggatggccaggggttccaggcttatcaggtttccct
ggcatcagaggaatcagtggactgcatggcttgccaggcactaaaggcttacccggatct
ccaggtgcagatggctttgggaatcctggtttccctggcccttttggtgacaaaggagaa
agaggggagcctaacacaattccaggccccctgggagcaccagggcagaaaggcgaaagg
ggagccccaggagtacaaggcccatcgggaagcccaggaattcaaggacatccaggattc
actgcaccttctaatatctctgggttaccaggtgacaaaggagacccaggtctatttgga
acacagggttatcgaggcttgccaggaacacctggaccatcagctccccctggaatcaaa
ggagaagtgggaagtccaggattcacaggagaaagaggacccaaagggtgggcaggagat
cctggaccccaaggcagacctggagtgtatggactcccaggagaaaaaggacctaaagga
caacaaggactcatgggataccatgggataccaggaagcagtggtgacagaggccccaag
ggacccaaaggagacagaggcttccctggcattcctggtactgtgggatcccctgggatt
ccaggaatccccttgaagattgtctcagagcctggagtagcaggtccccacggaaggaga
gggccccctggggtacagggagagatgggtccccagggccctccaggtgatccaggttta
cgaggactccctggaaaaccaggaccccaaggaagaggtggtatgtcggcccttccagga
ttcagaggcgaccaaggtctcatgggacatccaggaccagtgggccaagaaggtgaacca
ggacgaccaggaagtccagggctccctggcatgccaggtcgtagtgttagcattggttat
ctcctggtgaaacacagccagactgatcaagagccaatgtgtccagttggcatgaataaa
ctctggagtgggtacagcttactgtactttgaaggccaggaaaaagcacacaaccaagac
cttggactggctggctcgtgcttggctcgtttcagcaccatgcctttcctgtattgcaac
cccggagacatctgccattatgccagccgcaatgacaagtcctactggctctcgaccact
gcgccgctccccatgatgccggtggcagaagaggagatcaaaccctatatcagccgctgc
tctgtctgcgaagccccggccgtggccatagctgtccatagccaagacgtctccatccct
cactgccctgcggggtggcgcagcctgtggatcggctactccttcctcatggtatgtggt
gtttttctgccctttttcttgtggaggagagaaacagcaaggaaatggtttgctagtgaa
ccctccgaaagagttacctga
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