Gracilinanus agilis (agile gracile opossum): 123242662
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Entry
123242662 CDS
T07702
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7
KO
K06084
F-box protein 20
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
123242662 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gas04121
]
123242662 (LMO7)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123242662 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
PDZ
LIM
PDZ_2
PDZ_6
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
123242662
NCBI-ProteinID:
XP_044526521
LinkDB
All DBs
Position
3:complement(558372190..558439230)
Genome browser
AA seq
1536 aa
AA seq
DB search
MQDYNKDDMSYRRISVVEPKSALPFNRFLPNKSRQPTYVPAPLRKKRPDKNEDNRRSWAS
PVYTEADGTFSSKQRRNWDSKMENRLTIKETSNSSSYLEEEEEEEEEDEKTMGMPNIVKD
DLYVRKLSPIVPTAGSDFDKFLPKCWTPEDLNWKRIKKTSYKPWYKEFQGFRKNSDSEDE
NSVCEQNPAISSLAWRTGRGSDGNCQRRSILMDLATKQAPHSWNKNMERRFSGASDRPSQ
FLLLQALQTYSDDILSSETKTKIDPTSGPRIITCRRNVFYAPGYRRDDAENVVLDPDLEN
DDYFVRKTGAFHANPAVLQAFEDFRRFSVPDDFIERDIILQQREGEPVLPDLEKDDMIVR
RIPTQKKDVPLSGAPDKYHPVPFPEPWTLPPEIQARFLCVLERTSSSKEKINSCRVLVPS
SCQKKDDMLTRKIESWKLGTTIPPISFTPGPCSEEDLKKWEAIRAASKVRHKKRQMVERL
FQKISDENGSKSLSDITAEDVHSLRQLRYEEMQKIKSQLQEQDQQWQDDLAKWKNRRKSY
TSDLQKKKEEREEIEKQSLERSERSSKTFREILQDRETRNQETNSHQQKTVDPESMYSSN
NEVFNEKKVFPAGSLTREGYQNERREKEVTYGTESDKEDSSTLAKMEDYKTAEIQVPSQS
LTEKQSSVSALSSNHSLSTQMGPARVSASLPRSYQKTDTSRLTSVVTPRPFGSQSRGISS
LPRSYTMDDAWKYNGDVEITKRISESSSGSFSKSDDSQLYSSSTFKNVEEARESEKTMSS
STSLYLPVSQERDAFPKSEQSLISDPLPVSESLEGRTSSSPEPSSTKDQFSDMRIIMIHS
PGNSDADFGFTVRWDFPGIIVQSVEAGSPAALSQLQVDDEIIAVNNTKFSNKDTDKWEEI
MANARETGNLVVDVRRYGKNDWGKDQPSLPFVRHKTLNLTSMATKIIGSPETKWIDATSG
VYSSDKTSNISVKSDFSESLQNSNIETKGINGISGENSSMEPKASEPISLKNLKRRSQFF
EQGSSDSVVPDLPVPTINAPSRWAWDQEEERKRQEKWQKEQDRLLQEKYQREQEKLREEW
QRAQQEAEKESSKYLDEEQMVLHSNNVSLTSREPTLANWETNWREEIYPSDREKNRVEEE
ERLRHEEQKRQLEEQLLLEKERKIKELEELEQKQRAEIEQQRRQAEIEQQRRQAEIEEQR
RRAEIEEQRRRAEIEEQKRQAEKEKETSVQIYQYKRPVDPYEVTKRGDESTNLFPSDRNK
SRSTTELDHTTSRNGSNKYLDRIGNSGYSQKGSRKEQVTSEAEMERQQILQEMRKKTSLH
NDNSWIRQRSSSVTKEPICLPGIMRRGESLDNLDSPRSNSWRQAPWMNQSTGFHTSSSVQ
DFSRPPPQIISTSNRAYMRNPSSSFLPSSVGSVRTGSLSSAPSPAPRTQSPSTSQSGMQQ
RNRSVSGKRVCSYCNNILGKGAAMIIESLGLCYHLHCFKCVACGRDLGGSRSGAEVRIRN
NELYCNECYLRFKCKRANQRENLLPFKETSGSHAPS
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattataacaaggatgacatgtcctatcgaaggatatcagttgttgagcccaaa
tctgctctaccattcaatcgctttttacctaacaaaagtagacagccaacctatgtgcct
gcaccactgaggaaaaaaaggccggacaagaatgaggataatcgaagaagttgggcaagt
cctgtatacactgaagctgatggaaccttctcaagtaaacagaggaggaactgggactct
aaaatggaaaacaggctaacaataaaagaaacttcaaactcctctagctatttggaggag
gaggaggaagaagaggaagaagatgaaaaaacaatgggaatgccaaacattgtaaaagat
gatctttatgtgcgcaagctaagccccatagtgcccactgcagggagtgactttgataag
tttctccccaaatgttggactccagaagatctgaattggaaaagaattaaaaagacatct
tacaagccatggtataaggagtttcagggattcagaaagaattcagactcagaagatgaa
aattcagtgtgtgaacaaaaccctgccatttctagtctggcatggagaacagggcgaggt
tcagatggcaattgccagagacgttcaatcttaatggaccttgctaccaaacaagcccca
cattcatggaacaaaaatatggaaaggagattcagtggtgcttctgatagaccaagtcag
tttttattacttcaggccttacaaacatattctgatgacatcttgtcttctgaaacaaag
accaaaattgatcccacatctggcccaaggatcataacatgccgaaggaatgtcttttat
gccccaggctacagaagagatgatgctgaaaatgtcgtattagatcctgacttagaaaat
gatgattactttgttagaaagactggggctttccatgcgaatcctgctgttctccaggct
tttgaagattttagaagattctctgtcccagatgatttcatagagcgagatataatcctg
caacaaagagaaggtgaacctgtgcttccggatctagaaaaagatgacatgattgttcgc
agaattccaacacagaagaaagatgtgcctttatcaggagccccagataaataccatcca
gtcccctttccagaaccttggactctcccaccagaaatccaagccagatttctctgtgta
cttgaaaggacatcctcatcaaaagaaaaaattaatagctgtagagtcttagttccatct
tcttgtcaaaagaaggatgatatgttgactcgtaagattgagtcctggaaactagggaca
acgataccacccatcagttttactcctggtccatgcagtgaagaggacttaaaaaaatgg
gaggctattcgagcagccagcaaagttaggcacaagaaacgacagatggttgagagactc
tttcaaaagatttctgatgagaatgggagtaaatccttgagtgatatcacagcagaggat
gtacatagcttgcgccaactgcgctatgaagaaatgcagaaaataaaatcacaactgcaa
gaacaagaccagcaatggcaggatgacctagcaaaatggaaaaatcgtcgaaaaagttat
acttcagatctgcaaaagaaaaaggaagagagggaagaaattgaaaagcagtctcttgag
agatctgagaggagctcaaaaacgtttagagaaattcttcaggacagggaaaccagaaac
caagaaaccaacagtcatcagcagaaaacagttgatcctgagagcatgtattcatctaac
aatgaggtattcaatgaaaaaaaagtatttcctgcagggtctttgacaagagagggttac
cagaatgagagaagagagaaggaagtgacttatggtacagagagtgataaagaagattct
tcaactcttgcaaagatggaggactataaaacagctgaaattcaggttccttctcaaagc
ctgacagagaaacagagctcagtctcagctttgtcttctaaccattcactgagtacacaa
atgggacctgctcgggtttcagcatctctccccagaagttaccagaaaactgatacatct
aggttaacatcggtggttacgccaagaccttttggttctcagtcaagagggatctcatcg
cttcccagatcctatacgatggatgatgcttggaagtacaatggggatgtagaaatcact
aaaagaatttcagaaagttcaagtggctctttctcaaaatcagatgacagccagctttac
tcaagttcaaccttcaaaaatgttgaagaagcaagagaaagtgagaagacaatgtcatct
tctacatccttgtatttgcccgtttcccaagaacgtgatgcttttcctaaatcagaacaa
tctttaatatcagaccctttgccagtttctgagtctttagaagggagaacctcttcatca
ccggaaccttcaagtacaaaggatcagttcagtgatatgagaatcattatgatccacagc
cctggaaatagtgatgctgactttgggtttactgtaagatgggattttcctggaatcatc
gtgcaatcagttgaagcaggtagccctgcagcattgtctcagctacaggtagatgatgaa
attattgctgttaacaacaccaagttttcaaataaggacacagataagtgggaggagatc
atggctaatgcacgagaaactggaaacctagttgtggatgtcaggcgttatggaaaaaat
gactggggcaaagaccaaccttccctgccatttgtacggcataaaaccctcaatctcacc
agtatggctaccaaaattataggttcacctgaaactaagtggattgatgcaacttctgga
gtttacagttcagacaagacttcaaacatttcagtaaagagtgatttctccgaaagtctt
caaaattccaatattgaaacaaaaggaataaatggcataagtggtgaaaacagttctatg
gaacccaaagcctctgaacctatttctttgaaaaacttaaaaagacggtcacaatttttt
gaacaaggaagttctgattctgtggtgcctgatcttccagttccaaccattaatgctcca
agtcgttgggcttgggatcaagaggaagagaggaaacgacaggaaaaatggcagaaagaa
caggatcgtttgcttcaggagaagtatcaacgtgaacaggaaaaactgagggaagaatgg
cagagggctcaacaagaggctgagaaagaaagctcaaagtacttagatgaggaacagatg
gtattacactcaaataatgtttctctcacctcacgtgagccaactcttgccaactgggaa
acaaattggagagaagaaatttatccttcagatagagaaaaaaacagagtagaggaggaa
gaaagacttcgtcatgaagaacaaaagagacaattagaagaacagcttcttcttgagaaa
gaaaggaaaataaaggaattggaagaactggaacagaagcagagggcagagatagagcaa
cagaggcgacaggcagaaatagagcaacagaggcgacaggcagagatagaggaacagagg
cgacgggcagagatagaggaacaaaggagacgggcagagatagaagagcagaaacggcag
gcagagaaagagaaagaaacttcagtgcaaatatatcagtataaaaggcctgttgatcca
tatgaagtaacaaagcgaggagatgagtcaacaaatctgtttcctagtgacaggaataaa
tcaagatctaccactgaattggatcacactacaagtagaaatgggagtaacaaatatttg
gaccggattgggaattcggggtattcacagaaaggttctcgaaaagaacaggtcacgtca
gaagctgagatggagagacagcaaatccttcaagaaatgaggaagaagacctccctccac
aatgacaacagctggatcagacagcggagttccagtgtcaccaaggaacccatctgcctg
cctggcatcatgagaagaggtgaatctctagataacttagactccccaagatcaaattca
tggagacaagccccttggatgaatcagtcaactggcttccatacttcttcatctgtgcaa
gacttcagccgtccacctccacaaattatttctacatccaaccgtgcttacatgcgaaat
ccatcttccagttttctaccttcttctgttggttctgtacgaactggatctttatcatca
gcaccttccccagcacctcgaacacagtccccttctacttctcagtcagggatgcagcaa
cggaacaggtcagtcagtgggaagagagtatgctcctactgtaataacattctgggcaag
ggagcggccatgatcatcgagtctttggggctttgttatcatttacattgttttaagtgt
gttgcctgtgggcgtgaccttgggggctccaggtctggagcagaagtcaggatccgaaat
aatgaattgtactgcaacgagtgctatctccgattcaaatgtaagagagcaaatcagaga
gaaaatctcttgccttttaaagagacctcgggctcccatgcaccttcctga
DBGET
integrated database retrieval system
