Gracilinanus agilis (agile gracile opossum): 123242768
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Entry
123242768 CDS
T07702
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123242768 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gas04121
]
123242768 (TRIP12)
Enzymes [BR:
gas01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123242768 (TRIP12)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
HECT type E3
123242768 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
123242768
NCBI-ProteinID:
XP_044526759
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All DBs
Position
3:complement(627820265..627939939)
Genome browser
AA seq
2034 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKAYSPPESRKSISKAPKVQ
SNTTSEQSRGHISKRSCSSSSAVIVPQPEDPDRANTSEKQKTGQVPKKDSSRGVKRSASP
DYNRTNSPSSAKKPKALQHTEPPSETNRPHSKSKKRHLDQEQQLKSAPLPSTSKAHTRKG
GATGSSRSQKRKRTESSSCIKSGSVSESTGAEERSAKPTKLASKSATSAKAGCSTITDSS
SSASTSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSREKEQRSSKSE
TSKPGPSGLQAKLASLRKSTKKRSESPPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRG
AAEARRQEKMADPDSNQDGVNSSAARTDEPPQGAAASSSVAGAVGMTTSGESESDDSEMG
RLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQATDESQQLQAVIE
MCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVV
DAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN
ALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLL
QQVASKDLLTNIQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHF
LLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDG
AIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTA
RAIQRKPNPLANTNTSGYSDLKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPA
VRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKL
PDIFSVYFRREGVMHQVKNLAESEALLTSPPKACTNGSGTLGSSTTISTGTATAASNATA
DLGSPSLQHSRDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTT
TQSPKSSFLASLNPKTWGRLSAQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWI
KEQAHKFVERYFSSENMDGSNPALNVLQRLCTATEQLNLQVDGGAECLVEIRSIVSESDV
SSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRIKRFLHVFFASPLPGEEPIGRLEPMGNA
PLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGSRGSQALKFFNTHQLKCQLQRHPDCAN
VKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSG
NVRHRLQFYIGDHLLPYNMTVYQAVRQFSIQAEEERESTDDESNPLGRAGIWTKTHTIWY
KPVREDEDGSKDSVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEVYLISSP
PENITFEDPSLDVILLLRVLHAISRYWYYLYDNAMCKEIIPTGEFNNSKLTAKANRQLQD
PLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQ
DSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALV
SQELQRADLGLWRGEEVTLTNPKGSQEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFR
FLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQ
KKRLEQDKSQTKESLQYALETLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNL
EEYLRLVIFWALNEGVARQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKT
LMECCRPDHGYTHDSRAVKYLFEILSGFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTI
VRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cataaggcatatagccctcctgagagtagaaaatctatttctaaggcacccaaagtgcag
tctaatactacttctgaacagtcaaggggacacatttctaaaagaagctgcagttcatca
tctgctgtcatagttccacaaccagaagatccagacagagccaatacttcagaaaagcaa
aaaacggggcaggtgcctaagaaagacagttctcgaggagtgaaacgcagtgccagtcca
gattacaacaggacaaattctccgagctctgctaagaaacccaaagcccttcaacatact
gaacctccctcagaaaccaacagaccccattctaaatcaaagaagaggcatttagaccaa
gagcagcagctgaaatctgcaccattgccatcaacaagcaaggcgcacaccagaaagggt
ggagctaccggcagttcacgaagtcagaaaaggaaaaggacagaaagttcttcttgtata
aagagtggttcagtgtctgaatcaactggtgctgaagagcgatcagcaaaacccaccaag
ctggcttcaaaatcggccacctcagccaaagctgggtgtagcaccatcactgattcctct
tcttctgcctcaacatcctcctcgtcttctgcagtcgcctctgcgtcctccactgtaccg
cagggggccagagtgaaacaaggaaaagaccaaaacaaggccaggcgttcccggtcagca
tctagtcccagtccccgaagaagtagccgagaaaaggagcagaggtcttctaagtcagag
acatcaaaacctggaccttcaggattacaggctaaattagcaagtttaagaaaatctacc
aagaagcgcagtgagtcaccacctgctgagctccccagtttgcggcggagcacacgccaa
aagaccacgggctcctgtgctagtaccagtcggcgaggctctggcctgggcaaaagagga
gcggctgaagctcgccgacaggagaagatggcagaccctgatagcaaccaggacggagtt
aactcatcagctgcgcgcacagatgaacctccacaaggagccgcagcttctagttctgtt
gctggggctgtaggcatgaccacctctggtgagagtgagtcagatgattcagagatggga
agactgcaagctctgttagaggctaggggtcttcctcctcacctgttcggtcctcttggt
cctcggatgtcacaacttttccacaggacaattggaagtggagctagttctaaggcccag
cagcttctacaaggactacaagctactgatgaaagccagcagctacaggcagtgatcgag
atgtgtcaattattggtcatggggaatgaggagacattgggagggtttccagtaaaaagt
gtcgttccagctttgataacattgctgcagatggagcataatttcgatattatgaaccat
gcctgtcgagccttaacatacatgatggaagcacttcccagatcatctgctgtggtggtg
gatgccattcctgtttttttggaaaagctgcaagtgattcagtgtattgatgtggcagaa
caggccttaactgcactggagatgctgtcgcgtagacacagcaaagccattctgcaagcg
ggaggtttggcagactgcctgctgtatctagagttcttcagcataaatgcccagagaaac
gctctagcaatagcagccaattgctgccagagcatcacaccagacgaatttcactttgtg
gcggattccctccccttgcttacccaaaggctcacccaccaggacaagaaatcagtagaa
agcacttgtctttgttttgcacgactagtggacaacttccaacatgaggaaaatttgctt
cagcaggttgcttctaaggatttgcttaccaatattcagcagctgttggtagttactcca
ccaattttgagctctgggatgtttattatggtggtccgtatgttttccttgatgtgttct
aactgtccaactctagcagttcaacttatgaaacaaaatattgcagaaacacttcacttc
cttctgtgtggggcctccaatggcagttgccaggaacagattgatcttgtcccaagaagt
cctcaagaactttatgagctgacatctcttatttgtgaattgatgccatgtttaccaaaa
gaaggaatttttgctgttgataccatgctaaagaagggaaatgcccaaaacactgatggt
gcaatctggcagtggcgagatgacagaggcctttggcatccctacaacaggattgatagc
cggatcattgaggcagctcatcaggtcggtgaggatgagataagcctgtctaccttaggg
cgagtttatactattgattttaattctatgcagcaaatcaatgaggacacgggaacagca
cgtgctattcagagaaaacctaacccattagccaatactaacactagtggatattcagat
ttgaagaaggatgatgctcgagcacagctaatgaaagaggacccagaactggcaaagtct
ttcattaagacattgtttggtgttctttatgaagtgtatagttcttcagcaggacctgca
gtcagacataagtgccttagagcaattcttaggataatttattttgcggatgctgaactt
ctgaaggatgtgttgaaaaatcatgctgtttcaagtcacattgcttccatgctgtcaagt
caagacctgaagatagtggttggagctcttcagatggctgaaatcttaatgcagaaattg
cctgatatttttagtgtttacttcagaagagaaggtgtaatgcatcaagttaaaaattta
gcagagtctgaagctttgctaacaagtccaccaaaggcgtgcactaatggatcagggact
ttggggtccagcaccacaatcagcactgggacagccactgctgccagcaatgcaactgca
gacttgggctcacccagcttacagcacagcagagatgattctttagatctgagtccacag
ggtcgacttagtgatgtcctgaagagaaaacgactgccaaaacgtgggccaagaaggcca
aagtactctcccccaagggatgatgacaaagtagacaatcaagctaaaagccctaccact
acacagtctcctaaatcttctttcctggcaagcttgaatcccaaaacgtggggtagatta
agcgcacagtccaatagcaacaacattgaaccagcccgtacagccggagtcagtggtctt
gccagggctgcctcgaaggacaccatatctaacaatagagaaaaaattaagggttggatt
aaggaacaagctcataaatttgtggaacgatatttcagctctgagaatatggatggaagc
aatcctgcactaaatgtccttcagagactttgcactgcaactgaacaactcaacctccag
gtggatggtggagctgagtgccttgtagaaatccggagcatagtctcagagtctgatgtc
tcctcatttgaaatccagcatagtgggtttgtgaaacagttgctgctttacttgacatcc
aaaagtgaaaaagacgctgtgagcagagatatcagaattaaacgattccttcacgtcttt
tttgcttctccacttcctggagaagaaccaattggaagattggaacccatgggaaatgca
cctttgttggcattagttcacaagatgaacaactgccttagtcagatggagcagtttcca
gtcaaagttcatgatttcccaagtggaaatggaactgggagcagaggatcgcaagcttta
aaatttttcaacacacaccagttaaaatgccaactacaaagacatcctgactgtgcaaat
gtgaaacaatggaagggtggacctgtgaagatagatcccctggcgttggtacaagccatt
gagagatatcttgtagtcagaggctatggcagagtaagagaagatgatgaagacagtgat
gatgatggttcagatgaagaaatagatgagtctttggctgctcagttcttaaattcggga
aatgtaagacacagattgcaattctacattggagatcatttactgccatataatatgacc
gtgtatcaggcagttagacaattcagtatacaggctgaagaggagcgggaatctacagat
gatgaaagtaatccattaggaagagctggcatttggacaaagactcacacaatatggtat
aaacctgtaagagaagatgaagatggtagtaaagactctgttggtggtaaaagaggaagg
gcccaaacagctccaacaaaaacttcccctagaaatgcaaaaaagcatgatgaattgtgg
catgatggagtgtgcccatcagtatcaaatcctttagaagtttacctcatatcttcccca
cctgaaaatataacttttgaagacccttcattagacgtgatccttctattaagagtttta
catgccatcagtcgttactggtattatttatatgataatgcaatgtgcaaggaaataatt
ccaactggtgaatttaataacagtaaactgacagcaaaagcaaacaggcagcttcaggat
cctttggtaatcatgacaggaaatatcccaacatggctcactgagcttggaaaaacctgc
ccgtttttctttccatttgacactcggcaaatgcttttttatgttactgcatttgatcga
gatcgggccatgcagaggttacttgataccaacccagaaatcaatcagtcagactctcag
gacagcagagttgccccccgacttgacagaaaaaagcgaactgtgaatagagaagagctt
ttgaaacaggcagagtctgtgatgcaggaccttggcagctcaagggccatgttggaaatt
cagtatgagaatgaagttggtacaggtcttgggcctacactggaattttatgcacttgta
tctcaggaactacagagagctgacttaggcctctggagaggtgaagaagtaactcttact
aatccaaaaggaagccaagaagggaccaagtatattcaaaacctccaaggcctgtttgca
cttccctttggcagaaccgccaaaccagcacatattgctaaggttaagatgaagtttcgc
tttttaggaaaattaatggccaaggctatcatggatttcagattggtggaccttcccctt
ggcttgcctttttataaatggatgcttcgacaagaaacttcacttacatcacatgatttg
tttgatattgacccagttgtagcaagatcagtatatcacctagaagatattgtcagacag
aagaaaagacttgaacaagataaatcacagaccaaagagagtctacagtatgcattggag
accttgaatatgaatggctgctcagtagaagacctaggattggatttcacactaccaggg
tttcccaacatagaactgaagaaagggggaaaggatatacctgtcactatccacaactta
gaagagtatctacgactggttatattctgggcactaaatgaaggtgttgccaggcagttt
gattcattcagagatggatttgaatcagtcttcccactcagccatcttcagtacttctat
cctgaggaactggatcagcttctgtgtggcagtaaagcagacacttgggatgcaaagaca
ctgatggaatgctgcaggcccgatcacggctatacacatgacagtcgagccgtgaagtac
ctgtttgagattctcagtggttttgataatgagcagcagagattatttcttcagtttgtg
actggtagcccaagattgcctgtaggaggcttccgaagtttgaatcctcctttgacaatt
gtccgcaagacctttgagtcaacagaaaatccagacgacttcttgccctcagtaatgact
tgtgtgaactatctcaagttgccagactattcaagtattgagataatgcgtgaaaaactg
ttgatagctgccagagaggggcagcagtcattccatctttcctga
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integrated database retrieval system
