Gracilinanus agilis (agile gracile opossum): 123243703
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Entry
123243703 CDS
T07702
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03082
ATP-dependent chromatin remodeling
gas04714
Thermogenesis
gas05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123243703 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123243703 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123243703 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gas03000
]
123243703 (ARID1B)
03021 Transcription machinery [BR:
gas03021
]
123243703 (ARID1B)
03036 Chromosome and associated proteins [BR:
gas03036
]
123243703 (ARID1B)
Transcription factors [BR:
gas03000
]
Eukaryotic type
Helix-turn-helix
ARID
123243703 (ARID1B)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123243703 (ARID1B)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123243703 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
123243703
NCBI-ProteinID:
XP_044527685
LinkDB
All DBs
Position
4:420390649..420961958
Genome browser
AA seq
2261 aa
AA seq
DB search
METGLLPNHKLKNVGDPPAAPPHHQQHHHHAHHHHHHHHPHHLLHHHHALQQQLNQFQQQ
QQQQHPISNNNNSLVVVVGGGGSNNGAGGSGAAPSPDMEPQQHGGGKDGVLGNQAETQAQ
QLLSKSGEEEELPTKMGEQMGGRYEHPSLGALGAQQQQQQQQQQHGGGGPSAAVGVSEFN
NYYGSAPPASGGTGSRAGPCFDQHGGQQSPGMGMMHPAAAAAGPPNSMDPLQNSHEGYPN
SQYNHYPGYGRPGAGGGGGGGGSGGGGAGGGGGGGGGGGGGGGGGAGAGAGAVAAAAAAA
AAAAAAAGGGGGGGGYGGSSSGYGVLSSPRQQGSSMMMGPGGGGGGGGGGGGGGGGGGAT
SLGKAAAAASSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGSSYPDYSGNPNA
PGQQQSQAQGAAGAAPGSQQAAAGMGMGKDLGSQYGTANPGWAAAQQRNHPAMSPGNTGQ
TINRSQGSPMDPMVMKRPQLYGMGNNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPG
AMGGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYNQQPQHLPPQAQYLSTQSQQRYQTQQD
MSQEGYGTRSQPPMAPGKPNHEELSLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSAS
GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQ
MPPQPPGSQSESSSHPALSQSPMPQERGFMTGTQRNPQMSQYGPQQTGPSMSPHPSPGGQ
IHPGISSFQQSNSSGAYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGINANNQMH
GQGPSQPCGTMPLGRMPSTGMQSRPFPGNMSSMTPNSPGMAQQGGPGMGPPMPTVNRKAQ
EAAAAVMQAAANSAQSRQGSFPGMNQSGLMGSSSPYSQPMNNSSSLMNPQAPQYSMTPNM
VNSSTASMGLADMMSPGESKLPVPLKTDGKEEGAPPPESKSKDSYSSQGISQPPTPGNLP
VPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITRVYELGNEPERK
LWVDRYLTFMEERGSPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLN
VGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQAKIQPPSPANSGSLQ
GPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMPGGRNSAVSVHDPFSDVSDSSFPK
RNSMTPNAPYQQGMNIPDMMGRMPYEPNKDPFGGMRKVSGSNEPFMTPGQMPNSGMQDMY
NQAPAGAMSNMGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGIYPQQP
NYKRHMDGMYGPPAKRHEGDMYNVQYGSQQQEMYNQYGSTYSGPDRRPIQGQYPYPYNRE
RMQGPGQMQQHGIPPQMIGGPMPSSSSDGPQQNMWPTRNDMPYPYQNRQGPAGPTQAPPY
PGMNRSDEMMVPDQRINHESQWPSHVNQRQPYMSSSASMQPITRPPQSSYQTPPSMPNHI
SRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVIPAVPASQVSGPPPQPPPIRREITFPP
GSIEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVAT
FNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNTNKKEDSQSLADDSGK
EEEDEAECIDYYDEEEEEEEEEEEEEKTGTEDKSTAFASPDASVDPKERPKQASKFDKLP
IKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRAPP
ALGSLGKKKDSEGRGDLEEHPEKSIIATIDDVLSARPGALPEDSNPSAQAESGKFPFGIH
EAKSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKH
PGLVLILGKLILLHHEHPERKRAPQTYEKEDEEDKGVTCSKDEWWWDCLEVLRDNTLVTL
ANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCK
LSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARA
IAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARV
DENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggagacagggctgctccccaaccacaaactgaaaaacgttggcgatccccccgctgca
cctccccaccaccagcagcaccaccatcatgcccaccaccaccaccaccaccaccatcct
caccatctcctccaccaccaccatgcattacagcaacagctaaatcaattccagcagcag
cagcaacaacaacatccaatttccaacaacaacaacagcctcgtcgtcgtcgtcggcggc
ggcggcagcaacaacggagcggggggcagcggcgctgctcccagtcctgacatggagccc
cagcaacatggaggaggcaaagacggtgttttgggaaatcaggccgagacccaagcgcag
cagttgctgagcaagtcaggcgaggaggaagagctcccgactaaaatgggggagcagatg
ggtggccggtacgagcaccccagcctgggagctttgggcgcgcagcagcagcagcagcag
caacaacagcagcacggcggcggcggcccctccgcggcggtgggggtctcggagtttaat
aattactatggcagcgctccccctgcgagcggcggcacaggcagccgagccgggccttgc
tttgatcaacatggcggacaacaaagccccgggatggggatgatgcacccggccgccgcc
gctgccgggccccccaacagcatggaccccttgcaaaactcccacgaaggctaccccaac
agccagtacaaccattatcccggctacggccggcccggcgcgggaggcggaggaggaggc
ggcggcagcggcggcggcggtgctggtggaggaggaggaggaggaggaggaggaggagga
ggaggaggaggaggagcaggagcgggagcaggagcagtggcggcggcggccgcagcggcg
gcagcagcagcagcagcagcgggaggcggcggcggcggcggcggctatgggggttcgtcc
tcgggctatggggtgctgagctccccccggcagcagggcagtagcatgatgatgggccct
ggaggaggcggtggcggcggaggaggcggcggcggcggcggcggcggcggcggggctact
agcctgggcaaggctgccgctgctgccagctctgccgcgggtggttttcagcgcttcgcc
gggcagaaccagcacccttcgggggccacgccgaccctcaatcaactgctgacttcccca
agccctatgatgaggagctacggcagcagctaccccgattacagcggcaaccccaatgcc
ccaggccagcagcagtcccaggcgcagggagcggcgggggcagctccaggaagccagcag
gcagcagcgggcatgggcatgggcaaagatctgggctcccagtatggaactgcaaacccc
ggctgggcagcggcacaacaaagaaatcatccagctatgagccctggaaacactggacag
accattaacagatcccagggcagtccaatggatccaatggtaatgaagagacctcagttg
tatggaatgggcaataaccctcattcccagcctcagcaaagcagtccatacccagggggg
tcatatggtccccctgggccccagcgttatccaattggaatccagggacggaccccaggt
gccatgggaggaatgcaatatccacaacaacagatgccgcctcagtatggtcagcaaggt
gtgagtggttactgccaacagggccaacaaccatattacaaccagcaacctcagcaccta
ccaccccaggcacaatatctgtcaacacagtcccagcagaggtaccaaacacagcaggac
atgtctcaggaaggctatggaactagatctcaacctccgatggcaccaggaaagcctaac
catgaagagctgagcctaatacagcaagaaagaccatcaagtttaccagacttatctggc
tcaattgatgacctgcccacaggaacagaagctacattgagttcagcagtgagtgcatca
ggctctactagcagccaaggggatcagagcaaccctgcacagtcacccttctctcctcat
gcttccccccatctttccagtataccagggggcccgtcaccctcccctgtgggctctcct
gtcgggagcaaccagtcaagatcgggcccaatttctcctgcgagtattccaggcagtcag
atgccacctcagcctcctggtagccaatcagaatccagttcccatccagccttgagccag
tcaccaatgccacaagaacgaggttttatgacaggcacacaaaggaaccctcagatgtct
caatatgggcctcaacaaactggaccatccatgtcacctcatccttcccctggaggacag
atacatcctggaatcagtagctttcaacagagtaactctagtggggcttatggtcctcag
atgagccaatatggaccacaaggtaactactcgagacctccaacatatagtggagtgccc
agtgcaagctacagtggcccagggcctggcatgggcatcaatgccaataaccagatgcat
ggacaagggccaagccagccatgtgggaccatgcccctgggacggatgccatcaacgggg
atgcagagcaggccatttcctggaaacatgagcagtatgacacccaattctcctggcatg
gctcagcaaggagggcccggaatgggccccccaatgccaactgtgaaccgtaaggcacag
gaggccgcagctgcagtcatgcaagctgctgcaaactcagctcaaagcaggcaaggcagt
tttcctggcatgaatcagagtggactcatgggctccagctctccttacagccagcccatg
aacaacagttccagcctcatgaacccacaagcccctcagtacagcatgactccgaacatg
gtgaatagttcaacagcatctatgggtcttgcagatatgatgtcacccggtgagtccaaa
ttgcccgtacctctcaaaacagacggtaaagaagaaggcgctcctccgcctgagagcaag
tcaaaggatagctacagctctcagggtatttctcagcccccaaccccaggcaacctgcca
gtcccttccccaatgtccccaagctctgctagcatctcctcatttcatggagatgaaagt
gatagcattagcagcccaggctggccaaagactccatcaagccctaaatcaagctcttca
acaactactggggagaagatcacaagagtctatgagctggggaatgaacccgagcgcaag
ctgtgggtagacagatacctaaccttcatggaagagcggggctcacctgtggccagtctg
ccagctgtgggcaaaaagcccctggacctgttcaggctctatgtttgtgtcaaagagatt
ggaggcttggcacaggttaataaaaacaaaaaatggcgtgagctggccaccaacctgaat
gtgggtacttctagcagtgcagccagctccttgaaaaaacagtatattcagtacctgttt
gcctttgagtgcaagattgaaagaggggaggagccccctccagaagtcttcagcactgga
gatactaagaaacaagctaagattcagccgccatctcctgctaattctggatccttacaa
ggtccacagaccccccagtcaactggtagtaactccatggcagaagttcccggtgatctg
aagccacccacaccagcctccacccctcacggacagatgacaccaatgccgggcggcagg
aacagcgcagtcagcgtgcatgaccccttctcggatgtgagtgattcctcattccccaaa
cggaactctatgacaccaaatgcaccataccagcagggcatgaacattccagacatgatg
ggaaggatgccctatgaacctaacaaggacccttttggtggaatgagaaaagtgtccgga
agcaacgagcccttcatgaccccaggacaaatgcctaatagtgggatgcaggatatgtat
aaccaagccccagctggagcaatgtctaacatgggcatgggccagcggcagcagtttccc
tatggagccagttatgacagaaggcatgagccttatggacagcagtatcctggacaaggg
cctccctcaggacagccgccctatggaggacaccagcctggaatatatccacagcaaccg
aactacaaacgtcacatggatggcatgtatgggcccccagcaaaacggcacgagggagac
atgtacaacgttcagtacggcagccagcagcaagaaatgtacaaccagtacggcagtacg
tactcaggcccagataggaggcctatccagggacagtatccctacccgtacaaccgagag
cgcatgcagggcccggggcagatgcagcagcacggcatccctccgcagatgatcggcggc
cccatgccatcgtcgtcgagcgacggccctcagcagaacatgtggccaacgcgcaatgac
atgccttatccgtaccagaacaggcaaggccctgcgggccccacgcaggcccccccttat
ccaggaatgaaccgctccgatgaaatgatggtccccgatcagaggataaaccacgagagc
cagtggccttctcacgtcaaccaacggcagccttatatgtcctcttcagcctccatgcag
cccatcacgcgccctcctcagtcatcctaccagacaccgccatcgatgccaaaccacatc
tccagggcacccagcccagcgtcgttccagcgctccctagagaaccgcatgtctcccagc
aaatctcccttcctgccctccatgaagatgcagaaggtgatccccgccgtcccagcgtcc
caggtctcggggcctcccccccagccgccccccatccggagagagatcaccttcccgccg
ggctccatagaagcatcccaacctgtcttgaaacaaagacgaaagattacctcaaaagat
atcgtaactcctgaggcatggcgtgtgatgatgtcccttaaatcgggccttttggctgaa
agtacctgggctttggacacaattaatatcctcctctatgatgacagcactgtggctact
ttcaatctctctcagttatctggatttcttgagcttttagtagagtactttagaaaatgc
ctgattgacatttttggaattctaatggaatatgaagtgggggatcccagtcaaaaagca
cttgatcacaacacaaataagaaagaagacagccagtctttggcagatgactctgggaaa
gaagaagaagatgaagctgaatgtatcgattattatgacgaggaagaggaggaggaggaa
gaggaggaagaagaggagaagacaggcacagaagacaagagcacggctttcgcctctccc
gatgccagcgtcgaccctaaagagaggccaaagcaggccagtaagtttgacaaactgcca
ataaagatagtaaagaagaataatctgttcgtggtggaccgatccgacaaactaggccgt
gttcaggaattcaacagcgggctcctccactggcagctggggggaggcgacaccacggag
cacatccagactcactttgagagcaagatggagatccccccgcgtcggcgggcgcctccc
gccctcggctccctgggaaaaaagaaagactcggaaggaagaggcgacttggaggagcac
ccggagaagagcatcatagcgaccatcgacgacgtcttgtcggctcggcccggggcgctg
cccgaagactcgaaccccagcgcccaggccgagagcggcaagttccccttcggcatccac
gaagccaaaagccaccggaacatcaaactgctggaggatgagccgaggagccgagacgag
actccgctctgcaccatcgcccactggcaggactctttggccaagcgctgcatctgtgtg
tcaaatatcgtccgtagcttgtcttttgtgcctggcaacgacgccgaaatgtccaaacat
ccaggcctggtgctgatcctggggaagctgattcttcttcaccacgaacatccggagaga
aaacgggcccctcagacgtacgagaaagaagacgaagaggacaagggggtgacctgcagc
aaggatgagtggtggtgggactgcctcgaggtcttaagggataatacattggtcacgtta
gccaacatttctgggcagctagacttgtctgcttacacagaaagcatctgcttgccaatt
ttggatggcttgctacactggatggtgtgcccatccgccgaggcgcaggatcccttcccc
acagtgggacccaactcagtgctgtcgcctcaaagactcgtcctggagaccctgtgtaag
ctcagcatccaggacaacaatgtggaccttatcttggccacccctccatttagccgtcag
gagaaactctacgcgactttagttaggtacgtgggagaccgcaaaaacccggtctgccga
gaaatgtccatggcgctcttgtcgaaccttgcccagggcgacgcgctagccgccagggcc
atagctgtgcagaaaggaagcatcggaaacttgattagcttcctagaggatggggtcacg
atggcccagtaccagcagagccagcataaccttatgcacatgcaacctccgcctctggag
ccgcctagcgtagacatgatgtgccgggcggccaaggccttgctggccatggccagagta
gacgagaaccgctcagagttccttttgcacgagggccgtttgctggatatctcgatatca
gctgtcctgaactctctggtggcctctgtcatctgtgatgtactctttcagattgggcag
ttatga
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integrated database retrieval system
