Gracilinanus agilis (agile gracile opossum): 123243794
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Entry
123243794 CDS
T07702
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04014
Ras signaling pathway
gas04015
Rap1 signaling pathway
gas04024
cAMP signaling pathway
gas04517
IgSF CAM signaling
gas04520
Adherens junction
gas04530
Tight junction
gas04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
123243794 (AFDN)
04015 Rap1 signaling pathway
123243794 (AFDN)
04024 cAMP signaling pathway
123243794 (AFDN)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123243794 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
123243794 (AFDN)
04530 Tight junction
123243794 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
123243794 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
PDZ_2
RA_2
RA_3
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
123243794
NCBI-ProteinID:
XP_044527827
LinkDB
All DBs
Position
4:433832866..434021939
Genome browser
AA seq
1896 aa
AA seq
DB search
MSSAGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKC
IRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGERRLDIDEKPLVVQLNWNK
DDREGRFVLKNENDAIPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ
ASDKEDRPLHGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRS
SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVVEALEKYGLEKENPKDYCVAR
VMLPPGAQHSDEKGAKEVILDDDECPLQIFREWPSDKGILVFQLKRRPSDYIPKKLKKQI
DGKPQKGKERTDGSGYGSSLPPEKLPYLVELSPGRRNHFAYYSYHTYEDGSDSRDKPKLY
RLQLSVTEVGTEKFDENSIQLFGPGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISE
TTMLQSGMKVQFGTSHVFKFVDPSQDHIITKRSMDGGLMVKGPRHKPGIVQETTFDLEGD
IHSGTAIPTSKSTTRLDSDRISSASSTAERGMVKPMIRVEQQQDYRRQDSRTQDAPGPEL
ILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSNQYRPEISPAER
THKVIAIVNKMVSMMEGVIQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDIL
AHLVQMAFKYLVHCLQSELHNYMSAFLDDPEENSLQSPKIDDVLHTLTGAMSLLRRCRVN
AALTIQLFSQLFHFINMWLFNKLVTDPDSGLCSHYWGAIIRQQLGHIETWAEKQGLELAA
DCHLSRIVQATTLLTMDKYSREDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPSDLI
ENVVAVAENTADELARSDGREVQLREDPDLQLPFLLPEDGYSCDVVRNVPNGLQEFLDPL
CQRGFCRLMPHARSPGTWTIYFEGADYESHFMRENTELSQPLRKEPEIITVTLKKQNGMG
LSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMT
RTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFELYNNSAQNG
SPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKNAYATGTSAKITS
VSTGNLCTEEQTPTPRPEAYPIPTQTYTREYFTFPASKSQDRMVPVQNQWTNYDEKQQIQ
TDNHHSGAIIQRVTRSQEELRDDLVYQPECHRKDADYIDQKSDSDMWINQSSSLESSTSS
QEFLNHSSKSVTPGSTLTKSGPGRWKTPTALQPTPVAISQPIRTDLPPPPPPPPVHYSAD
FDGVPMDLPLPPPPPLHQVGAQTAPAAAAERKKREEHQRWYEKEKARLEEERERKRREQE
RKLGQMRTQPLNPTQLPPVPVQQIKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYI
TISKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQDLQNKPDRTAEENDRLR
KLMLEWQFQKRLQESKQKDEDDEDEEDDDVDTMLIMQRLEAERRTRDEERRRQQQLEEIR
KREAEDRARQEEDRRRQEEERAKRDAEEKRRQEEGYYNRLEAERRRQHDEAERRLLEPDE
PGLYRPPLPRDYELPPLTPSANAPPPPPQRNTSYLKTQVLSPDSVYTAKFVAYNEEEEEE
DSGLAGQDKYSCTRKSYGDFPPAAPKPPQQPRPVSDGIYLSTSFQPPSLNANSTAHTTGQ
PPPPPKKPAFYQASGPKGMSSYTGSTGAVVGVHEVYRDPREKRSKSQEADLPGISGAPEN
LTFKERQRLFSQGQDVSNKVKASRKLTELENELNTK
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggccggcagtcgggaggaggagcggcggaaactggccgatatcatcaaccac
tggaacgcgaaccggctggacctgttcgagattagccagcccaccgaggatttggaattc
catggagtaatgagattttactttcaagataaagctgctggaaactttgctacaaaatgc
atccgggtctccagcactgctacaacccaagatgtcatagaaactcttgcagagaaattt
cgacctgacatgagaatgctgtcatctcccaaatattcactttatgaagtgcacgtcagt
ggagaaagaagattggatatagatgagaagcctctagttgtacagttaaattggaacaaa
gatgatcgggagggcagatttgtactcaagaatgaaaatgatgccattcctcctaagaag
gctcagagtaatgggcctgagaaacaagaaaaagaaggcgtgatccagaactttaaaaga
actctttcaaaaaaagaaaaaaaggaaaaaaagaaacgggaaaaagaagcattgcgacag
gcatctgataaagaagataggcctttgcatggagatgatattgagaattctcgcctggca
gctgaagtgtataaggatatgcctgaaaccagtttcacacgcacaatatcaaatcctgaa
gtagtgatgaaacggcggagacagcagaaactagaaaagagaatgcaagaattccgaagc
tcagatggacggcctgattcgggtggaactctgaggatttatgcagatagtttaaaacca
aacatcccttacaagacaatcctgctgtcgaccacggatactgcagattttgctgtggtt
gaagctttagagaaatatggtctggaaaaagaaaatcccaaagattactgtgttgcccga
gttatgctcccccctggagctcaacattcagatgaaaaaggtgctaaagaagttatcttg
gatgatgatgaatgccctctacaaatcttcagggaatggccaagtgacaaaggaatttta
gtctttcagttgaaaaggaggccatcagattatatcccaaagaaactgaagaagcaaatt
gatggaaagccacaaaaagggaaggaaagaactgatggatctggctatggctcttcactt
cctcctgaaaaactgccctatttggtagaattaagtccaggcagaaggaatcactttgcc
tactacagctatcacacttacgaagatggttctgactccagagataagccaaagctctac
cgtctgcaattaagtgtcactgaagttggaacagaaaaatttgatgagaactccattcag
ttgtttggcccaggaattcagcctcaccattgtgacctaacaaatatggatggagttgtt
acagttactcctagaagtattgatgcagagacctatgtggaagggcagcgtatctcagag
acaaccatgttacaaagtggcatgaaggttcagtttgggacatctcatgtatttaaattt
gtagaccccagtcaagatcacatcattaccaaaagatctatggatggaggccttatggtt
aaaggtccaaggcacaaacctggaattgtccaggagacaacctttgatctggaaggagac
attcatagtggaacagcaataccaaccagcaagagtaccaccagactggacagcgacagg
atatcatcagcatccagcacagcagaacgagggatggtgaaaccaatgatcagagtagaa
cagcaacaagactatagaagacaggacagcagaactcaggatgcacctggtcctgaactg
atactgcctgcaagcatagaattcagggaaagttctgaagattcatttttatcagctatt
ataaattatactaatagctctacagtacattttaaattatcacctacatatgtgttatat
atggcatgtcggtatgtactgtcaaaccaatacagacctgaaatcagccctgcagagcgt
actcacaaagtcatagcaatagttaacaagatggtgagcatgatggaaggtgttattcag
aaacagaagaatattgcaggggcacttgccttctggatggcaaatgcatcagaactactc
aactttattaagcaggaccgagatctcagccgaatcactttggatgcccaggatatttta
gcacacttggttcaaatggcattcaaatatttggttcattgtcttcaatcagaacttcat
aactacatgtcagcctttctggatgatcctgaagaaaatagtttacaaagtcccaaaata
gatgatgttttgcacacactcactggagctatgtcattgttacgaagatgtagagttaat
gctgccttgacgattcaactcttctctcagctcttccattttattaacatgtggctgttt
aacaaacttgttactgacccagattcagggttgtgttctcattactggggagccattatt
cgtcagcagttgggccatattgagacatgggcagagaaacaaggccttgagcttgctgct
gactgtcatcttagcagaatcgtacaggcaaccacacttcttaccatggacaaatattca
cgtgaggatattccaaatattaacagtacctgttttaaactgaattcgctacaacttcag
gccttattacaaaattatcactgtgcaccagatgaaccttttatcccatcagatctcata
gaaaatgtagtagctgttgctgaaaatacagctgatgaattagcacgtagtgatgggaga
gaagtacaattacgagaagatcctgatcttcaactaccctttcttctgccagaagatgga
tattcttgtgatgttgtccgaaacgttccaaatgggttacaggaatttttggatccactg
tgtcagagaggattctgtaggttaatgcctcatgcacgttcaccaggtacttggacaata
tactttgaaggagcagattatgaaagccactttatgcgggagaacactgaactgtctcag
cctctaagaaaagaacctgaaataatcactgtgactctcaagaagcaaaatggaatgggt
cttagcattgttgctgcaaagggtgcaggccaagataaacttggaatttatgtgaagtcc
gttgtaaaaggaggtgctgcagatgtggatggtcgtctggctgcaggtgatcaactgctt
agtgtagatgggcggagtttggtaggactgtcacaagaaagggcagcagagctcatgaca
agaacgggttctgtggtaacattagaagttgcaaaacaaggagcgatttaccacggcctg
gctactctgctcaaccagccttctcccatgatgcaaagagtttcagatcgacgaggctca
ggtaaaccccgaccaaagagtgaaggttttgagctatataataattcagcacagaatggg
tcacctgagagtcctcagctgccttggacagagtatagtgaaccaaagaagcttccagga
gatgataggttaatgaagaacagagctgatcaccggtctagccctaatgtagcaaatcaa
cctcctagtcctggagggaaaaatgcatatgccactggaacatcagctaaaataacatct
gtttctactggaaatctctgtacagaggaacaaacaccaacaccaagacctgaagcttat
cctatcccaactcaaacatataccagagaatactttacattcccagcttctaaatcccag
gatcgtatggttcctgttcagaatcagtggactaattatgatgagaaacaacagatccag
acagataatcatcattctggtgctataattcagcgtgttactcgttcccaagaagaattg
agagatgatctcgtttatcagccagagtgtcatcgcaaagatgcagactatatagatcaa
aagtctgacagtgacatgtggataaatcagagctcttctctggaatctagcacatctagc
caagaattcctgaaccattcttctaaatctgttactccaggttctacattaaccaaaagt
ggtcctggccgctggaaaacgccaacagctcttcagccaaccccagtggctatttcccag
cctattcggacagaccttcctcctccaccaccccctccccccgtgcactattcagctgac
tttgatggggttccgatggacttgcccctacctcctcctcctccgctgcaccaggtcgga
gctcagactgctccagcagcagctgcagaacggaaaaagagagaggagcaccagcggtgg
tatgaaaaagaaaaggctagattagaggaggagagagagaggaagaggcgagagcaggag
agaaagctggggcaaatgcgcactcagcccttgaaccccactcagcttcctcctgtgcct
gtacagcagataaagcccgaaaagccatctacgttacagcgacctcaagaaacagtcatc
cgggagctgcagccccagcagcagccacggacgattgagaggagagatctgcagtacatc
acaatcagcaaagaagagctttcttctagtgatagcttgtcccctgacccatggaaacga
gatgccaaggaaaagctagagaagcagcagcaaatgcacattgtagacatgctaagcaaa
gagattcaggatcttcagaataaaccagatcgcacagcagaagaaaatgaccgtttgcgc
aaactcatgttagagtggcagttccagaagagactccaggaatcaaagcagaaagatgaa
gatgatgaagatgaggaagatgatgatgtagacaccatgctaattatgcagcgactagag
gccgaaagaagaaccagggatgaagaacgcagacgccaacaacagttagaagagattcgt
aaacgggaagcagaagacagggccaggcaggaagaagatcgtcggcgccaagaggaggag
cgagcaaagcgagatgctgaagaaaagaggcgacaggaggaagggtattacaaccgcctg
gaagctgaaaggcgccgacagcacgacgaagcggagcggaggctgctggagcctgacgag
cctggtctgtacagaccgccacttccacgggactatgaactcccacccctaaccccctcc
gctaacgctcctcctcccccacctcaacgaaacacctcttacctcaaaacgcaggtcctc
tcccccgactcggtgtacactgccaagtttgttgcatacaatgaggaggaggaggaggag
gactccggcctagcaggtcaggataagtactcctgcacgagaaaatcttacggggacttc
cctcctgccgcccctaagccgccacagcagccgcgcccggtctccgacggcatctatctt
tccacctcattccagccaccctcgctcaatgccaacagtactgctcacacaacaggccag
ccccctcccccaccaaaaaagcccgccttctaccaggccagcggccccaaaggaatgagc
tcttacactgggtctactggagcggtcgttggtgtccatgaggtttatagagatccaaga
gagaaacgatctaaaagccaagaggcagatttacctggaatttctggagcccctgaaaat
ctgacattcaaggagcgtcagcgtctcttttcccagggccaagatgtctccaataaagta
aaagcttctaggaaattaacagaactggaaaatgaattgaatacaaaatga
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integrated database retrieval system
