Gracilinanus agilis (agile gracile opossum): 123243816
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Entry
123243816 CDS
T07702
Symbol
SUPT4H1
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123243816 (SUPT4H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123243816 (SUPT4H1)
03019 Messenger RNA biogenesis [BR:
gas03019
]
123243816 (SUPT4H1)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123243816 (SUPT4H1)
RNA polymerase I system
123243816 (SUPT4H1)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
123243816 (SUPT4H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
123243816
NCBI-ProteinID:
XP_044527860
LinkDB
All DBs
Position
4:177419152..177424599
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AA seq
117 aa
AA seq
DB search
MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDSYLQMKGNREMVYDCTSSSFDGI
IAMMSPEDSWVSKWQRVSTFKPGVYAVSVTGRLPQGIVRELKSRGVVYKSRDTAIKT
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggctttagaaaccgttcccaaggatttgcggcatctgcgagcttgccttctttgttcc
ttggtcaagactatagaccaatttgagtatgatggctgtgataattgcgactcataccta
cagatgaaaggtaaccgagagatggtatatgactgtacaagctcttcttttgatgggatc
attgcaatgatgagcccggaggacagctgggtttctaaatggcagcgagtcagtaccttc
aagcctggagtttatgcagtgtctgtcactggccgcctgcctcaaggaattgttcgggag
ctgaagagccgaggtgtggtctacaaatccagagacacagcaataaagacttag
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