Gracilinanus agilis (agile gracile opossum): 123243923
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Entry
123243923 CDS
T07702
Symbol
CDRT1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein
KO
K10266
F-box and WD-40 domain protein 10
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gas04121
]
123243923 (CDRT1)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123243923 (CDRT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_DCAF4
F-box-like
Beta-prop_IP5PC_F
WD40_like
Beta-prop_DCAF12
F-box
Beta-prop_HPS5
WD_LRWD1
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
123243923
NCBI-ProteinID:
XP_044528029
LinkDB
All DBs
Position
4:complement(243201285..243323926)
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AA seq
1016 aa
AA seq
DB search
MENVEFKLEYAPDLRCQQKNQVVPVCQKCETCVLAWKIFSTKEWFWRISGKSRQQFLVRI
LKQLKSLDLLYYFQRLLSTSLAKDFTYFRSRAIINQQGDHNGTCSGIKRVDEKKKDMMLD
TLRWFANSSHRMKVNYILLLLQMCDCQLLFLAASVVHILFLREQRISGASLEEVSEVSLF
PESLKEAFYNYEIPYSRPHAYSFSRVSGSPGLLDVKHQEDYHTGDGRLHPDLLPLPGEMF
SKRIDVTTEDKHIPYYASYRQQLPEISKEKDFIRCLPVHISKYILGLLDKKTLNKCLLVS
RHWALLAEQVRKDHSTHQYVENEIALLQETYSKGIYPNYAGRPMIPVPKIEEEEKSTSHS
KASKWKVKPKAEYSIWAAYQGQETVMVQMEERNVFCGNHTTHILCDTWDNTRVIHYCGGK
YVVESAHRKIELKDINQRKLMPVFFRGHTGSIRALILCEKESLVVSGSYDLTIRCWNIDS
GLCTKIFIGHNGTITCLDLHEKKLVSGSRDCQVKVWDMNSGKCLKTFKHKDPIWTVKMSS
THIVSGCERGLVKVWHIVSATLVKILKGHEGPVKCLCFDEWHLLTGSNDGFVIGWSMVGK
YERCLMAFKHPREVLCVAFLYLRVISGCADGKIRIFNFLTGTCLKVMKANCRGDPVLSFF
IEGNRMVINTEGNIVMFQFEEIKWQYHTDKNKAFVKKPKEKEKEDIVSSSKDHRTSHPKT
FHETEAKHHGDTFQIQQPTTTDTSEVGHQRLKKQGLQLPLSPDQLLLTVSSLQQAHIENN
ADHLQIPKINVRDAWGPAVLQQETSSNFLDVKGMSLLPGVAEQAAQIKKLKSASMAPGLR
RTSTPYEIQKLKPNLKKSLHNSKVCTHIPQPVIVRPKSCGTFKDGEEKSQAKQFSFVDGQ
VQKIGNLTSTQIIKPNRMVIRNTGEVSYPRMKPASYTVTANPYRINTGFMLLTVKQKKEY
NEAKMMEYQNMKSTGIANPDKASKVAWLRKIKSLSIDDFMKKGKTAAPEFGHNTFI
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgtggaattcaagcttgaatatgctccagatctacgatgtcagcagaaaaat
caggtagttccagtgtgccaaaaatgtgaaacttgtgttttagcttggaaaattttctcc
accaaggagtggttttggaggattagtggcaagtctcggcagcagtttcttgtaaggatt
ctgaagcagctgaaaagtttggatttactgtattatttccagagactactcagtacatct
cttgcaaaggatttcacctattttaggtcacgggccattatcaaccagcaaggtgatcat
aatgggacatgctctggaataaagagagtggatgaaaagaagaaagatatgatgttggac
actctgcgatggtttgcaaattcttcccatcgtatgaaagtcaattacatcctgctactt
ctacaaatgtgcgactgccaattattattcttggctgccagcgtggtccatatcctcttt
ttgagagagcaaaggataagtggagcgtccttagaagaggtctcagaagtttcattattt
ccagagagccttaaggaagccttttacaactatgagatcccctactctagaccgcatgcc
tattctttttccagagtctcaggaagcccaggcttattagatgtcaagcaccaggaagac
taccacactggtgatggaagattacatcctgatttacttcctctgcctggggagatgttc
tccaagagaatagatgttactacagaagataagcatatcccttattatgcttcctacagg
cagcagttacctgaaattagcaaggaaaaagacttcattcgatgcttgcctgtccacatc
tccaaatacattttagggcttctagacaaaaaaaccctgaacaagtgtcttcttgtaagc
cggcactgggctctgctggcggagcaggtccgaaaagatcattcaacacatcagtatgtt
gagaatgagattgcactccttcaggaaacttattctaaagggatataccctaactatgcc
ggtagaccaatgatcccagttcccaagatagaagaagaagaaaaaagcacctcccactca
aaagcttcaaaatggaaagtgaaaccaaaggctgaatacagtatatgggcagcgtaccag
ggccaggagactgtaatggttcaaatggaagagagaaacgtcttttgtggcaaccatacc
acccatatcctttgtgacacgtgggacaataccagagtcattcactattgtggtggaaaa
tatgtcgtagaatctgcccaccgaaagatagagctgaaggatattaatcaaagaaaactg
atgcctgttttttttcgaggacatacagggagtattcgggcactaatactctgtgagaaa
gaatctttagtagtgagtgggagttatgatttgactatcagatgctggaacattgactct
ggactttgcacaaaaatctttattggccataatggcacaatcacttgcttggatctacat
gagaaaaaacttgtatcaggatcaagggactgccaggtaaaagtgtgggacatgaactct
gggaaatgtctgaagactttcaaacataaagatcccatctggactgtaaagatgagtagt
acccatattgtgagtggctgtgagcgaggcctggtgaaagtatggcatatagtatcagcc
acactggttaagattcttaagggccatgaaggaccagttaaatgcctgtgttttgatgag
tggcatctcctgacaggaagcaatgatggttttgttattggctggagcatggtggggaaa
tatgagcgatgtctcatggcattcaaacatccaagggaggtactctgtgtggccttcctc
tatctccgggtaatcagcggttgtgctgatggaaagatccgcatatttaacttcttgacg
gggacctgtctgaaggtgatgaaagccaattgcagaggtgacccagtgctgtccttcttt
attgagggcaacaggatggtgatcaatacagaaggcaacattgtgatgttccagtttgag
gaaattaaatggcagtatcacacagacaagaataaagcttttgtcaagaaacccaaggag
aaggaaaaggaagacattgtttcctcttcaaaggatcacagaaccagtcatccaaagaca
ttccatgaaactgaagctaaacatcatggtgacacctttcaaatccagcagccaacaact
actgatacttcagaagtaggtcaccaacgattaaagaaacagggattacaattgcctctc
tcacctgatcagcttcttctgactgtcagctctctgcagcaagctcacatagaaaataat
gctgaccatctccaaatccccaaaattaatgtccgcgatgcctggggacctgcagtactc
caacaggaaacctcaagtaactttctagacgtaaaaggtatgtcacttctaccaggggta
gcagaacaggctgctcagatcaagaagctgaaatctgccagtatggctccaggtttaaga
agaactagcactccatatgaaatccaaaaattgaagcccaacttaaagaaatccttacac
aactctaaggtatgcactcacatcccacagcccgttatagttcgtcctaagtcttgtgga
accttcaaggatggagaagaaaaatcacaagcgaagcaattttcctttgtggatggtcag
gtacaaaagataggtaacctgactagcacacagatcatcaaaccaaatcgaatggttatt
cgaaatacaggagaggtctcatatccccggatgaagccagcctcttacactgtaacagcc
aatccctatcggattaatactgggttcatgctactgacagtgaaacaaaagaaagaatac
aatgaagccaaaatgatggagtatcagaacatgaaatccactgggatagccaatcctgac
aaagcaagcaaagtagcctggctcaggaagataaaaagtctatctatagatgacttcatg
aagaaagggaaaacagcagcccctgaatttggacataacacatttatctga
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