Gracilinanus agilis (agile gracile opossum): 123243953
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Entry
123243953 CDS
T07702
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gas03016
]
123243953 (TRMT13)
Enzymes [BR:
gas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
123243953 (TRMT13)
Transfer RNA biogenesis [BR:
gas03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
123243953 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
123243953
NCBI-ProteinID:
XP_044528080
LinkDB
All DBs
Position
4:447799376..447823877
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AA seq
484 aa
AA seq
DB search
MATLPRTTAEAQVPTEGRCGYFVERKKRFCRMVAAAGRRFCGEHAGAAGTGAEEENIRKR
ILCPLDPKHTVYEDQLEKHLKKCNSREKPKPDYFIQDINAGLKDETEILDEQVPISSLSE
EQLENLIKKLRKASNGVNCTLKEQIMSHPALHDVLNDPKNGDSAFKHLKQQASILGNIER
LNLLGPRRCFVEFGAGKGKLSHWVDIASQEAEKVYFLLVERVTTRFKVDGKHKKKNSVFE
RLQIDIQHLCLSKIPVLIKEKLPVVGIGKHLCGVATDLALRCLVETYPTRCKEKNEEPEA
KRIKNDKTDAENDTLVNEGSKKNELDQQIPVAGIVIALCCHHRCDWRHYVGKEFFKTLGL
GPLEFNYFQRMSSWATCGMRETTLETSEINIKKRDDQASDNEDEHEGFRKTDDNPEGLSR
LLTVEERKNIGRLCKLLIDQGRIQYLQQKGYNASLQYYTDSFVSLENVLLTALPKQSSTP
DSAT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctactttgccgcggactacggcggaggcccaggtcccgaccgagggcagatgcggt
tactttgtggaaaggaaaaaacgtttctgccgcatggtggcggcggctgggagacgattc
tgcggggagcatgctggagctgcgggaacgggcgcggaagaagaaaatatcaggaaaaga
atactctgtcccctagatccaaaacacacagtatatgaagatcagcttgaaaagcatttg
aaaaaatgtaactcaagagagaaaccaaaaccagactactttattcaagatattaatgca
ggattaaaagatgaaacagaaatccttgatgaacaggtcccaatttcttctttatccgaa
gagcaattggaaaacttaattaagaaattgagaaaagccagcaatggtgtgaattgtaca
cttaaagaacaaataatgtcacatcctgcattgcatgatgtcttaaatgaccccaaaaat
ggtgattctgctttcaagcatttgaaacaacaggcttcaattttaggtaacattgaaaga
ttaaatttattgggaccaagaagatgttttgttgagtttggagctggaaagggaaaattg
tcccattgggttgatattgcctcacaagaagctgaaaaagtctacttcctgctagtagaa
agggtgactacaagattcaaggtagatggtaaacacaaaaagaaaaactctgtattcgaa
aggcttcaaattgatattcagcatttatgtctgagcaaaatacctgtgctaataaaagaa
aagttacctgtggttggaattggaaaacatctatgcggtgtggcaacagatcttgcattg
cgatgtttagttgaaacctatcctaccagatgcaaagaaaaaaatgaggaacctgaagcc
aagcgtataaagaatgataaaactgatgcagaaaatgacactttggtaaatgaaggaagt
aaaaagaatgaattggatcagcagatccctgtagctggcatcgttattgcactctgttgt
catcacaggtgtgattggaggcattatgtaggcaaagaatttttcaagaccctaggactt
gggccactagaatttaactatttccaacgaatgagtagctgggctacttgtggaatgcgg
gaaacaactttggaaacatccgaaattaatataaagaaaagagatgatcaggccagtgat
aatgaagatgagcatgaaggattcaggaaaacagatgataatcctgaaggtttatccagg
cttcttactgttgaagaaaggaaaaatataggtcgtctctgtaaattgctgattgaccaa
ggccgaatccagtatttgcaacagaagggatacaatgcttctttgcagtactatacagac
tcctttgtgtctttagaaaatgtcttgttaacagctttacccaaacagtcttcaacacca
gactcagctacataa
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