Gracilinanus agilis (agile gracile opossum): 123244004
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Entry
123244004 CDS
T07702
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123244004 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gas03041
]
123244004 (PRPF38B)
Spliceosome [BR:
gas03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123244004 (PRPF38B)
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Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
123244004
NCBI-ProteinID:
XP_044528166
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All DBs
Position
4:457963258..457978075
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AA seq
547 aa
AA seq
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MANNSPALTGSNSQPPPQHQAAAAAAQQQQQQCGGGGGAIKPAASGKQGNVLPLWGNEKT
MNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGG
VRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLW
DWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKT
RPRKIKKDGKEGIEEIDRHTERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDREL
EREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDRE
REKENERGRRRDRDYDKERGTEREKERERSRERRSRSEVEEKKHKEDKDEKKHRDEKKDS
KKEKKHSRSRSRERKHRSRSRSRNTGKRSRSRSKEKTSKHKNESKEKSNKRSRSGSRGRT
GSVEKSRKREHSPSKEKSRKRSRSKERSHKREHSDSKDQSDKQDRRRSQSTERESQEKQH
KNKDETV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaacagcccggcgctgacaggcagcaactcgcagccgccgccgcagcaccag
gcggccgcggccgcggcccagcagcaacagcagcagtgcggcggtggcggcggcgccatc
aagcccgccgcctcgggcaagcagggcaacgtgctgccgctgtggggcaacgagaagacc
atgaacctgaaccccatgatcctgaccaacatcctgtcgtcgccctactttaaggtgcag
ctctacgagctcaagacctaccacgaggtggtggacgagatctacttcaaggtcacacat
gttgagccgtgggaaaaaggaagcagaaaaacagcaggccagacagggatgtgcggaggg
gttcgaggtgttggaacaggaggaattgtttctacagcattttgcctgttatacaagtta
tttactttgaaactcactcgcaagcaagtgatgggtctcataacacatacagattctcca
tatattagggcccttggatttatgtatataaggtacacacagcccccaacagatctctgg
gattggtttgaatccttccttgatgatgaagaggacctggatgtgaaagctggtggaggt
tgcgtaatgaccattggagaaatgcttcgttcttttcttaccaaattagagtggttttcc
accttatttccaagaatccctgttccagttcagaaaaatattgatcaacaaattaaaaca
agacctaggaaaatcaagaaagatgggaaggaaggaattgaagaaatagaccgacatacc
gaacgtagacgttcaaggtcaccaagaaggtcgttgagcccaaggcggtcaccaagaaga
tccagaagtagaagccatcatcgagaaggccatggttcttctagttttgacagagaatta
gaaagagagaaggaacgacagcgactagaacgcgaggccaaggagagagaaaaggaaagg
cgaagatcccgaagcattgatcgtggtttagagcgcaggcgaagcagaagtagggagaga
cacagaagtcgaagtaggagtcgtgatagaaagggagataggagggacagagatcgtgaa
cgggaaaaagagaatgagagaggccggagaagagaccgtgattacgataaagaaagaggc
actgaaagagaaaaagagagggaaaggtcaagagaaaggagaagtaggagtgaagtggaa
gagaagaagcataaggaggataaagatgaaaagaagcacagggacgagaaaaaagattca
aaaaaagagaaaaaacacagtaggagtagaagcagggagagaaaacatcgaagtagaagc
cgaagtagaaatacaggaaagcgcagtcgaagccgaagcaaagagaaaacaagtaaacat
aaaaacgagagtaaagaaaaatcaaacaaacgaagcaggagtggcagtcgaggaagaact
ggcagtgttgaaaagtcaagaaaacgggaacatagtcccagcaaagaaaaatcccgaaaa
cgtagcagaagcaaagaacgttctcacaaacgagagcacagtgatagcaaggaccagtct
gacaaacaggatcgtcggaggagccagagtacagagcgtgagagccaagaaaagcagcat
aaaaacaaagatgagactgtgtga
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