Gracilinanus agilis (agile gracile opossum): 123244220
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Entry
123244220 CDS
T07702
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123244220 (PTBP1)
03041 Spliceosome [BR:
gas03041
]
123244220 (PTBP1)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
123244220 (PTBP1)
Spliceosome [BR:
gas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123244220 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
123244220
NCBI-ProteinID:
XP_044528494
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All DBs
Position
1:735338916..735368060
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AA seq
557 aa
AA seq
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MDGIVPDITVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDNRSPGVPSRV
IHVRKLPGDVTEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEEASNTMVSYYTTVTPV
LRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAADAGMAVAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYSDPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAP
GIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLTGA
GNSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHL
NGQKLHGKPIRITLSKHQTVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
TLHLSNIPPSISEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNH
DLGENHHLRVSFSKSTI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcccagatataacagttggtacaaagcggggatctgacgagcttttc
tctacttgtgttactaacggaccctttatcatgagcagcaactctgcttctgcagctaat
ggaaatgacagcaagaaattcaaaggtgataacagaagtccaggagtcccttcccgagta
atccatgtgagaaaactcccaggtgacgtcacagaagctgaagttatttccctgggatta
ccatttggcaaggtcaccaatcttctaatgctgaaaggcaaaaaccaggctttccttgaa
atgaacacagaagaggcatcaaacactatggtaagttactataccacagtgactcctgtc
ctccgaagccagcctatctacattcagttctcaaaccacaaggagctcaaaacagacaac
tctccaaaccaagcacgtgcccaggcagcacttcaagctgtaaactccgttcaatcagga
aatctagccctttctgcctctgctgcagcagccgatgcaggaatggcagtggctggccag
agtccagttttgaggatcatcgtagaaaatctcttttacccagtcactttggatgtactg
caccagattttctccaagtttggcacagtactgaaaataataaccttcaccaagaacaac
cagttccaggctctgttacaatattctgaccctgtgagtgcccagcatgctaaattgtct
cttgatgggcagaatatctacaatgcctgttgtacactgcgcattgacttttctaaactc
accagcctcaatgtgaaatacaacaatgataaaagtagagactacactcgcccagatctg
ccctctggtgacagccagccttcccttgatcagactatggcagcagcctttggtgcacct
ggtataatctctgcctctccatacgcaggagctggtttccctcccacctttgcaattcct
caagctgcaggactctccgttccaaatgttcatggagcccttgctcctctggctattcca
tcagcagctgctgctgcagctgcagccgggcggattgccattcctggtctcacaggggca
gggaattctgtcttgctggttagcaacttgaacccagagagagttacaccccaatgcctc
tttattcttttcggcgtttatggtgatgtccagcgagtgaagatcttattcaataagaaa
gagaatgccttggttcagatggcagatggaaaccaggcccaacttgccatgagccatcta
aatggacagaaacttcatgggaagccaatcagaatcactctttccaagcaccagacagtt
cagcttcctcgtgaaggacaagaagaccaaggcttgactaaagactatggaaattcaccc
cttcatcgtttcaagaaaccaggctccaaaaactttcaaaatatcttccctccgtctgct
accctgcacctttctaatataccgccttctatatctgaagaagaccttaagatgttgttc
tcaagcaatggaggaatggtcaaaggattcaagttcttccaaaaggaccggaagatggct
ctgatccagatgggctcagtggaagaagccattcaatcccttattgaccttcataaccac
gaccttggagagaaccaccaccttcgggtgtccttctcaaagtctaccatttaa
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