Gracilinanus agilis (agile gracile opossum): 123244316
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Entry
123244316 CDS
T07702
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03013
Nucleocytoplasmic transport
gas03015
mRNA surveillance pathway
gas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123244316 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
123244316 (EIF4A3)
03015 mRNA surveillance pathway
123244316 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123244316 (EIF4A3)
03041 Spliceosome [BR:
gas03041
]
123244316 (EIF4A3)
03009 Ribosome biogenesis [BR:
gas03009
]
123244316 (EIF4A3)
03012 Translation factors [BR:
gas03012
]
123244316 (EIF4A3)
Enzymes [BR:
gas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123244316 (EIF4A3)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123244316 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
123244316 (EIF4A3)
Spliceosome [BR:
gas03041
]
Complex C
Other components
EJC/TREX
123244316 (EIF4A3)
Ribosome biogenesis [BR:
gas03009
]
Eukaryotic type
90S particles
Helicases
123244316 (EIF4A3)
Translation factors [BR:
gas03012
]
Eukaryotic type
Initiation factors
eIF-4
123244316 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
123244316
NCBI-ProteinID:
XP_044528656
LinkDB
All DBs
Position
4:230698954..230723211
Genome browser
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacagccacgatggctacttcgggttctgcgcggaagagactgctgaaagag
gaagacatgaccaaagtggaattcgagaccagtgaagaagtggacgtgacacccactttc
gacacgatgggtttgcgggaggacctgctgcgtggcatctacgcctacggttttgagaaa
ccatcggctatccaacagcgtgctatcaaacaaattattaaaggaagagatgtcattgca
cagtctcagtctggtacaggcaaaacagcaacatttagcatttcagtcctccagtgtttg
gatattcaggtgagagaaacccaggctttgatcttagccccaaccagggaattagctgta
caaattcaaaagggccttcttgctcttggtgactacatgaatgtccaatgtcatgcctgt
attggagggacaaatgtcggtgaagatatcaggaaactggattatgggcaacatgttgtt
gctggtacaccaggtcgtgtatttgatatgattcgtcgcagaagtttaagaactcgtgct
atcaagatgttggttttggatgaagctgatgaaatgcttaataaaggattcaaggaacag
atttatgatgtgtatagatacctgcctcctgctactcaggtagttttgatcagtgccacg
ttgcctcatgagatcttagaaatgaccaataaattcatgactgatccaattcgcatcctg
gttaaacgtgatgaattgactctggaaggaatcaaacaattttttgtggcagtggaaaga
gaagaatggaaatttgacactttgtgtgacctttatgatactttgactattactcaagca
gtcatcttttgtaataccaagaggaaggtagactggctgactgagaaaatgagagaagcc
aacttcactgtttcttcaatgcatggagacatgccccaaaaagaaagagagtctatcatg
aaagagtttagatctggtgcaagccgggtacttatttctacagacgtctgggccagagga
ttagatgttcctcaagtctctcttatcattaactatgacttgccaaataacagagaatta
tacatacacagaattgggagatcaggtcgatatggccgaaagggtgttgcgattaatttt
gtaaagaatgatgatatccgtattctcagagatattgaacagtactactcaactcaaatt
gatgaaatgcccatgaatgttgctgatcttatctga
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