Gracilinanus agilis (agile gracile opossum): 123244389
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Entry
123244389 CDS
T07702
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123244389 (SUPT6H)
03036 Chromosome and associated proteins [BR:
gas03036
]
123244389 (SUPT6H)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123244389 (SUPT6H)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123244389 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
123244389
NCBI-ProteinID:
XP_044528773
LinkDB
All DBs
Position
4:486356347..486395969
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEDEASDSGDSEDDVGHKKRKRTAFDDRLEDDDFDLIEENLGVKVKRQKFRRV
RKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMTAPEEEEEEDEESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYE
YEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQLR
SIPVKAAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQPVNSFSRKGPSTVQKIKE
ALGFIRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKENLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKASRKKLKRIREDGDEEEGEGEEVEDEQKGPELKQASRRDMYTICQSAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKVNITPTKKGKKDVDEAHYAYSFKYLKNKPVKELRDDQFLKTCLAEE
EGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFL
YVQMAKELKNKLLAEAKEFVIKACSRKLYNWLKVAPYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGDGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFLL
NKKPHVVTIAGENRDAQMMIEDVKRIVHELDQGQQLSSIGVEMVDNELAVLYMNSKKSEA
EFRDYPPVLRQAVSLARRIQDPLIEFAQVCSTDEDILCLKFHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMC
HMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAY
RSPNTEEVFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQQ
RTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHV
DVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQECGGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVSVTPEGFRYRGQVF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQTNTTPQSTQAQAQPQPSSSSRHRQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggagagcgaggcagaggagtccgaggaagagtacaatgacgaggga
gaggtggttcctcgagtcaccaagaagtttgttgaagaagaagaagatgatgaagaggag
gaggaagagaacctggatgaccaggatgaacaggggaacttgaaaggcttcatcaatgat
gatgatgatgaagaggaagaagaggaggatgaggctagcgactctggagattctgaggat
gacgtgggacacaaaaagcggaagcgcacagcttttgatgaccgcctggaagatgatgac
ttcgatctcattgaagagaacctgggtgtcaaagtcaaacgtcaaaagttcaggcgtgtg
cggaaaatgtcagatgatgaggatgatgatgaagaagaatatgggaaggaggagcatgag
aaagaggccattgctgaggaaatctttcaagatggtgaaggggaagaaggacaagaggct
gtagaagcccctatgactgcgcctgaggaagaagaagaagaagatgaagagtcagatatt
gatgacttcatagtggatgatgatggacagcctcttaagaagcccaaatggaggaaaaaa
ctcccaggctacacagatgcggccctgcaggaggctcaggagatctttggggtggacttt
gactatgatgagtttgagaagtacaatgagtatgatgaggaactggaagaggaatatgaa
tatgaggatgatgaagctgaaggtgagatccgggtgcggcccaaaaagaccaccaaaaag
cgggttagccggcgaagcattttcgagatgtatgaacccagtgagctggagagcagccac
ctaacagaccaggataatgagatccgagctactgatctgccagagagattccagttgcgt
tccattcctgttaaggcagctgaagatgatgagcttgaagaagaagctgactggatctat
aggaatgcctttgccacgccaaccatttctctccaggaaagttctgattacctggaccgt
gggcagcctgtcaacagtttcagtcgtaaaggccccagcactgttcagaagatcaaagag
gccctgggtttcatccgcaatcagcattttgaggtacctttcattgctttctaccgaaag
gagtatgtagaacctgagctgcatataaatgatctctggagagtgtggcagtgggatgaa
aagtggacacaattgaagattcgaaaagagaatttgactcggctttttgagaagatgcaa
gcttatcagtatgagcagatatctgcagacccagacaagcccctggctgatggcatcagg
gctttggacaccacagatatggagagattaaaagatgtgcagtcaatggatgagttgaag
gacgtgtacaatcacttcttactctactatgggcgtgacatcccaaagatgcagaatgct
gccaaggccagccggaagaagttaaagcgcatccgggaagatggggatgaggaggaaggt
gaaggggaagaagtagaagatgagcagaaaggtccagagctcaagcaggcctctcgccga
gacatgtataccatctgccaaagtgctggcctagatggcctggccaagaagtttgggctc
accccagaacagtttggggagaacctccgggacagctatcagaggcatgaaacagagcag
tttcctgctgagcccctggagctggcaaaagactatgtgtgcagtcagttcccaacccca
gaggcagtgctagagggtgctcgatacatggtggccctacagattgcccgagaacctcta
gtccgacaggtgcttcgacagaccttccaggagagggctaaagttaacatcaccccaacc
aagaagggcaagaaggatgtggatgaggcccactatgcctactctttcaagtatctgaag
aacaaacctgtgaaagaacttagggatgaccagttcctcaagacatgcctggctgaagag
gaaggcctactcaccattgatatcagcattgacatgaaaggagttgagggctatggcagt
gaccagacatactttgaagagatcaagcaattctactaccgagatgaatttagccaccag
gtgcaggagtggaaccggcagcggaccatggccattgagcgggccctgcagcagttcctc
tatgtgcagatggccaaagagctaaagaataaactgctggctgaagccaaagaatttgtc
atcaaggcttgtagccgaaagctgtacaactggctgaaggtggccccctaccgacctgac
caacaggtagaagaagatgatgattttatggatgaaaaccaagggaaaggcatccgggtc
ctagggattgccttctcctctgccagagaccaccctgtgttttgtgccttggttaatgga
gatggagaggtgacagatttcttacggctgcctcactttaccaaacggaggactgcctgg
agggaagaagaacgggaaaaaaaagcccaggacattgaaaccctaaagaaattccttctg
aacaagaaaccacatgtggtaacaattgctggcgagaacagagatgcccagatgatgatt
gaagatgtgaaacggattgtacacgaacttgaccaaggccagcagctatcatccattggg
gtggaaatggtagacaatgaactggctgtcctgtacatgaatagcaaaaagtctgaggcg
gagttcagagattaccccccagtgctgaggcaggcagtgtctctggcccgacggattcag
gaccctttgattgagtttgcacaggtgtgcagcacagatgaggacattctttgtctcaag
ttccaccccttgcaggaacatgtggtaaaggaggagctgcttaatgccctgtattgcgag
ttcattaatagagtcaatgaggttggtgttgatgtcaatcgagccatcgcccacccctac
agccaggctctgatccagtatgtctgtggcttggggccacgaaaaggaacccatttacta
aagattctgaagcaaaacaatactcgcctagaaagccggacccagctggtcaccatgtgc
catatggggcccaaggtcttcatgaactgtgctggtttcctcaagatagacacagcctct
ttgggtgacagcactgactcctatatagaggttttggatggctcccgggtccatcctgag
acttacgaatgggccaggaagatggcagtggatgccctggaatatgatgaatctgcagag
gatgccaaccctgcaggggctttggaagagatcttggagaacccagaacgactcaaggac
ttggaccttgatgcctttgcagaagagctcgagaggcagggatatggtgataaacacatc
acattgtatgacatccgtgctgagctgagctgcaggtacaaggatctccggacagcttac
cgctctcctaacactgaggaagtcttcaacatgctgactaaggagactccagaaaccttc
tacattggaaagctgatcatctgcaatgtcactggaattgcccatagacgcccacaaggc
gagagctatgaccaggcaatccgaaatgatgagacaggactgtggcagtgtcccttctgc
cagcaggacaatttccccgagctgagtgaggtctggaaccactttgatagtggctcttgc
ccaggacaagccattggtgtcaagactcgactggacaatggagtcactggctttatccct
acaaagtttctcagtgacaaggtggtgaagcggcctgaggagcgagtgaaggtggggatg
actgttcactgccgcatcatgaagattgacattgagaagttcagtgcagatctgacttgc
cgtacctccgatctcatggacaagaacaatgagtggaagttgcccaaagacacttattat
gattttgatgctgaagcagccgaccacaagcaggaagaggacatgaaaaggaagcagcag
aggaccacatatatcaagagggtgattgcgcatccatcctttcataatattaactttaaa
caagcagaaaagatgatggagaccatggaccagggtgatgtgattattcggccaagcagt
aaaggagagaaccacctaacagtgacctggaaggtcagcgatggcatctatcagcatgtg
gatgtccgggaggaaggcaaagagaatgcctttagcctgggggccaccctgtggatcaat
agtgaggaatttgaggacctagacgaaatcgttgcccgatatgtccagcctatggcatcc
tttgctcgagatctgcttaaccacaagtattaccaggaatgtggtggtggggatcgcaag
aaactagaggagctgctcatcaaaaccaagaaagaaaaaccaactttcattccctatttt
atctgtgcctgtaaggaactgcctggcaaattcctgctggggtaccagccgcggggtaag
ccaagaatagaatatgtgagtgtgactccagagggattccggtaccgaggccaggtcttc
cccactgtgaatgggctcttccgatggtttaaggatcattaccaggaccctgtgccaggt
atcactcccagcagcagcagcaggacccggacccctgcctccatcaatgccacccctgcc
aacatcaaccttgcagatctgaccagagcagtaaatgccctgccccaaaacatgacgtca
caaatgttcagtgccatcgctgctgtgactggccaaggacagaatcccaacgccacccca
gcccaatgggcctccagccagtatggctatggtggcagtggaggaggcagcagtgcttat
cacgtgttccccaccccagcccagcaacctgtggccacgccactgatgactcccagctat
tcatacacaacccccagccagcccatcaccacaccccagtaccaccagctacaaaccaac
accaccccacagtccactcaagcccaagcccagccccagccttcctccagctcccggcac
cgacagcagccaaagtccaacagccacgccgccatcgactgggggaagatggcagagcag
tggctacaggagaaagaggcggagcgtcggaaacagaagcagcggctgactcctcggccc
tcgcccagccccatgatcgagagcacccccatgtccatcgctggcgacgccacgccgctg
ctggatgaaatggaccgctag
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