Gracilinanus agilis (agile gracile opossum): 123244428
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Entry
123244428 CDS
T07702
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123244428 (VPS53)
Membrane trafficking [BR:
gas04131
]
Protein recycling
Others
EARP complex
123244428 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
123244428 (VPS53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Sec8_N
Snf7
Laminin_II
NBD94
Syndetin_C
COG3_N
PsaD
COG5_N
FUSC
XhlA
Motif
Other DBs
NCBI-GeneID:
123244428
NCBI-ProteinID:
XP_044528856
LinkDB
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Position
4:489352008..489511877
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AA seq
832 aa
AA seq
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MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDRADFNAVEYINALFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRHALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANVLEPRIKQEIVKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLLDYEE
KYGRMFPHEWYMTERIAVEFCHVTRVELAKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFSGCTLSDGAPKKVEVPPPSTNPFLEDEPGPEMEELTMDKGDLDQPKKPKVPENPFHGI
ISKCFEPHLYVYIESQDKNLGELIERFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSTSGGLTISSLLKEKEGSE
VAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLIERINLTGEMDTFSTVISN
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNLIKLLTDCNTETFQKILDMKGLKR
SEQSSMLELFRQRLPTPPSASEGTGSTSLTAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaggagctcgagttcgtggaggagctggaagccgtgctgcaactcacc
ccggaggtgcagctagccatcgagcaggtgtttccaagtcaggatcctctggatagagca
gatttcaatgctgtggaatacattaatgcccttttcccaacagaacagtctctggcaaac
atagacgaagttgtgaacaaaattcgattgaaaataaggagactggatgacaacattcga
acagttgtgagaggtcagactaatgtggggcaggatggaaggcacgcactggaagaggct
cagaaagccatccagcagctcttcggcaaaattaaggatatcaaagacaaagcagaaaaa
tcagagcaaatggttaaggaaattactcgggacattaaacagctagaccacgccaaacgc
cacctgaccacttccataaccacgctgaaccacttgcacatgttggcagggggtgttgat
tctcttgaagccatgacaaggaggcgacaatatggagaagttgccaaccttctacagggt
gtagtgaacgtcttagaacacttccacaagtacatgggaatcccacagattcgacagctt
tcagagagagtaaaggcagcccagactgagttaggacagcagatcctggctgattttgaa
gaagcttttccttcccagggcaccaagaggcctggaggccccagcaatgtcctgcgagac
gcatgtctggttgctaatgttttggaacccaggatcaaacaggaaatcgtcaagaagttt
attaagcagcacctgtctgagtacctggtgctctttcaagaaaaccaagatgttgcctgg
cttgacaaaattgacagacgctatgcctggataaaacgccagcttctggactatgaagag
aaatatgggcgtatgtttccacatgaatggtatatgaccgagaggattgctgtagagttt
tgccatgtcacaagggtggaacttgccaagattatgcgtacccgagcaaaggagatagag
gtgaaattgcttctgtttgctattcagaggactaccaacttcgagggacttctagccaag
cgcttctctggctgtaccctgtcagatggtgctccgaaaaaggtagaggtccctcctcca
tccactaatcctttcctggaagatgaacctggcccggagatggaagaattgacaatggac
aaaggggacttagaccagccaaagaagccaaaggtcccagaaaacccatttcatggtatc
atatccaagtgttttgagcctcatctctacgtgtatattgaatcccaggacaagaacctt
ggagagctgattgagcgatttgttgctgatttcaaggcccaggggcctcccaaaccaaac
actgatgaaggtggtgccgtgctgcccagctgtgctgacctcttcgtctattacaagaag
tgcatggtgcagtgctcccagctcagcactggggagcccatgattgctctgaccaccata
ttccagaaatatctccgggaatacgcttggaaaatactctctggcaacttacccaagacc
accagcaccagtggaggactgaccatcagtagcctcctcaaggagaaggagggctctgaa
gtagccaagttcactctagaggagctctgccttatctgcagcattctgagtacagccgaa
tactgcttggccacaacccagcagcttgaagaaaaactgaaagaaaaagttgatgcaagt
ctgattgaaaggatcaacttgaccggggagatggacacattcagcactgtcatctccaac
agtattcagttgctagttcaggatcttgatgctgcctgtgatcctgctcttactgccatg
agcaagatgcagtggcagaatgttgaacatgttggtgaccagagtccatatgtcacctct
gtgattctccacataaagcagaatgtccccatcatccgggacaacctggcctccacacgc
aagtacttcactcagttctgcatcaaatttgcaaactccttcattcccaagtttatcaac
catctattcaagtgcaagccaattagcatggtgggagcagaacagctgctgctagatacc
cattctctgaagatggtcctcctggatctgccttccattggctcacaggtggtgaggaaa
gcgcctgccagttacaccaaaatcgtcgtgaagggcatgactcgggctgagatgatcctg
aaggtggttatggcccctcatgagccattggtggtatttgtggacaacctcatcaaactc
ctcacagactgtaacacagaaactttccagaagatcctggacatgaagggccttaagaga
agtgagcagagcagcatgctggaactgttccgccagcggctccctaccccaccatcagca
tcagaggggactggctctacatccctgacggcgccgacaccggaacaagaatcatcccgc
atccgaaaactggagaaactcatcaaaaagaggctctga
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