Gracilinanus agilis (agile gracile opossum): 123244510
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Entry
123244510 CDS
T07702
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123244510 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123244510 (RABGEF1)
Membrane trafficking [BR:
gas04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
123244510 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
123244510 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Bac_RepA_C
Motif
Other DBs
NCBI-GeneID:
123244510
NCBI-ProteinID:
XP_044528957
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All DBs
Position
4:complement(493891048..493908259)
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AA seq
531 aa
AA seq
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MSLKSERRGIHVDQSELLCKKGCGYYGNSAWQGFCSKCWREEYQKARQRQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEGKKTNEKSRKVTTVKKFFSASSRGGPKKVAQEK
TLKQGQLGRERNTDNLLRDLKEIFAPAWELASPSEEIQEAKAASPSINRQASLETDRVSK
EFIEFLKTFHKTGQEIYKQTKIFLEAMHHKRELSIEEQSECTQDFYQNVAERLQTRGKVP
PEKMEKAMDQIEKYIMTRLYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQMLCVPVNEE
IPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADDFLPTLI
YIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQED
FDRYMSGQSSPKKPESEPWAPDACLGVQQMYKNLDLLSQLNERQERLMSQAKKLEKDLID
WTDGIAKEVQDIVEKYPLEIKPPSQPLAAIDSENVENDKLPPPLQPQVYAG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaagtctgaacgcagagggattcatgtggaccagtctgagctcctatgcaag
aaaggatgtggttattatggcaactcagcttggcagggcttctgctccaagtgctggagg
gaagaatatcagaaggcccggcagcggcagattcaggaggactgggagctggccgaaagg
ctccaaagggaagaagaagaagcctttgctagcagtcagagcagccaaggggcccaatcc
ctcactttttccaaatttgagggaaagaaaaccaatgagaagagtcgcaaggtgacaaca
gtgaagaaattctttagtgcttcttcccgaggtggccccaagaaggtggctcaagagaaa
actcttaagcaaggacagcttgggagggagcgaaacactgataacctgctcagggatttg
aaggagatttttgctcctgcctgggagctggcttcgccttctgaagagattcaagaggca
aaagccgcaagcccttccattaaccgacaggccagcctggagacggacagggtgtccaag
gagttcatagaatttctcaagaccttccacaaaacaggccaagagatctataagcagact
aagatctttttggaagctatgcatcacaaaagggaattgagtattgaggagcagtcggag
tgcactcaagatttttaccagaatgtggccgagagactccagacccgggggaaagtgccc
ccagagaagatggagaaagcaatggaccagattgagaaatatatcatgacacgcctgtat
aagtatgtgttttgtccagaaactactgacgatgagaagaaggatcttgctgttcaaaag
cggatcagagccttgcactgggtcactccacagatgctttgtgttcctgttaatgaagaa
atcccagaagtctcagatatggtggtgaaagcaattacagacattatcgagatggactct
aagcgtgttcctcgggacaagctggcctgcatcaccaaatgtagcaaacacatcttcaat
gctatcaagatcaccaagaatgagccagcatctgccgacgacttcttgcccaccctcatc
tacatcgttctgaagggcaaccccccacgccttcagtcgaatatccagtatatcacccga
ttctgtaacccaagccgcctgatgactggagaggatggctactactttaccaacttgtgc
tgtgcagtggctttcattgagaaactggatgcccagtctttgaatttaagtcaagaagat
ttcgatcgctacatgtctggccagagctctcccaagaagcccgagtccgagccctgggct
ccagatgcctgcctcggggtgcagcagatgtacaaaaacttggatcttctctctcaactg
aacgagcggcaggaaaggctcatgagccaagccaagaagcttgaaaaagacctcatcgac
tggacagatggaattgctaaggaagttcaagatatcgtggagaagtatcccctggaaatc
aagccccccagccagcccttagcagcgattgactctgaaaatgtcgaaaatgacaaactc
cccccacccttgcaaccccaggtctatgcgggatga
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