Gracilinanus agilis (agile gracile opossum): 123244739
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Entry
123244739 CDS
T07702
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04136
Autophagy - other
gas04140
Autophagy - animal
gas04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123244739 (ATG16L1)
04136 Autophagy - other
123244739 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
123244739 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123244739 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
gas03029
]
123244739 (ATG16L1)
Membrane trafficking [BR:
gas04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
123244739 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
123244739 (ATG16L1)
Mitochondrial biogenesis [BR:
gas03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123244739 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_RFWD3
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Beta-prop_DCAF12
INO80F
PUMA_CC
APEH_N
WD40_like
HEF_HK
CCDC93_CC
Synaptobrevin
Fez1
Lipoprotein_6
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
123244739
NCBI-ProteinID:
XP_044529239
LinkDB
All DBs
Position
4:512368213..512399147
Genome browser
AA seq
624 aa
AA seq
DB search
MSTGLRGAGLPSWKRHIADELRRRDRLQRQAFEEIIAQYNKLLEKSDLQSVLADKLQAEK
HDLQGRHEISPGHDGLWNDAQLQEMAQLRIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DREMQMNEAKIAEYLQKISELEAECQELRNKLQDFERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDI
EVLVEEASDAAEETSPVRTLSRTATKRISQPAGGLLDSITNIFGLSESPLLGHHPSSDAA
RRRSVSSFPVPQDNLDAPPSSNKEVRVPTTAVYVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEVFGDRCEAKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRSESIIRELELLGKITALDLNPERTDLLSCSRDDLLKIIDLRVNAIK
QTFSAPGFKCGSDWTRVVYSPDGSYVAAGSAEGSLYVWNVLTGKVEKVLSKQHSSSINAV
AWSPCGTHVVSVDKGNKAILWSDY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgggcctccggggcgccgggctcccgagctggaagcgccacattgcggacgag
ctgcggcggcgggaccggctccagaggcaggccttcgaggaaatcatcgcgcagtataat
aagttgctggagaaatcagacctacagtcggtgttggctgacaaactacaagcagaaaaa
cacgacttgcaaggcaggcatgaaatcagtccaggacatgatggcttgtggaatgatgct
caattacaagaaatggcccagctgagaattaaacatcaagaagaattaactgaattacat
aagaaacgtggggagttagctcaatcggtgattgacctgaataaccagatgcagcagaag
gaccgggagatgcagatgaatgaagcaaaaattgctgaatatttgcagaaaatcagtgag
ctggaagctgagtgccaagaacttcgcaataagcttcaggactttgaaagagccaaccag
accctaaaggatgaatatgatgccctgcagatcacctttactgccttagaagagaagctg
agaaagactactgaggataaccaagagctggtcactcgctggatggctgagaaagcccag
gaggccaatcgtctcaatgcagaaaatgaaaaggactcccgacgccgccaggcccggctg
cagaaggaacttgctgaagctgccaaagagccattgcctgtagaaccggatgatgacata
gaagtgcttgtggaagaagcttcagacgcagccgaggagacgtcgcccgttcgaacactc
agccggaccgccactaagcgaatctcccagcctgctggaggccttctggactctatcact
aatatctttggtctgtccgagtctccccttttgggacaccacccttcttctgatgctgcc
aggaggcgttctgtctcctccttccctgttcctcaggataacttggatgctcctcctagt
tctaataaagaagttcgggtgcccaccacggcagtctatgtcttcgacgctcatgatgga
gaagttaatgctgtgcagttcagcccaggctccaggctactcgccacaggaggcatggac
cgaagggttaaactctgggaggtgtttggagataggtgtgaggcaaagggctccctctct
ggcagtaatgcaggaattaccagcattgaatttgacagtgccggatcttatctcttagca
gcttcaaatgatttcgccagcaggatctggactgtggacgataaccgattacggcacacg
ctcacggggcacagcggcaaagtcctgtctgccaagttcctgctggacaacgcacggatt
gtttcaggaagtcatgaccggaccctcaaactctgggatctgcgcagcaaagtctgtata
aaaacagtatttgctggctccagttgcaatgatatcgtctgcacagaacagtgtgtgatg
agtggacatttcgacaagaaaatccgtttctgggacatacgctctgaaagcataatccga
gagttggagctgctgggaaagatcacggctcttgacctgaatccagagaggacagacctg
ttaagctgctcccgagacgatctgctcaaaattatcgacctacgagtcaatgccatcaag
cagaccttcagcgctccgggattcaagtgtgggtctgactggacccgagtcgtgtacagc
cccgatggcagctacgtggcagccggctccgcagaaggctccctctatgtctggaacgtg
ctcacaggcaaggtggagaaggtgctctcgaagcagcacagttcttcaattaatgcggtg
gcctggtcaccttgtggcacgcatgtggtcagtgtggacaaaggaaacaaagctattctg
tggtctgactactga
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