Gracilinanus agilis (agile gracile opossum): 123244873
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Entry
123244873 CDS
T07702
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin-2
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas05014
Amyotrophic lateral sclerosis
gas05017
Spinocerebellar ataxia
gas05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123244873 (ATXN2)
05017 Spinocerebellar ataxia
123244873 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
123244873 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123244873 (ATXN2)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123244873 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
123244873
NCBI-ProteinID:
XP_044529457
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All DBs
Position
1:complement(756392162..756472815)
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AA seq
1050 aa
AA seq
DB search
MRMVHILTSVVGSKCEVQVKNGGVYEGVFKTYSPKCDLVLDAAHKKTTDSSPGPKREDIV
ERILFKCSDFVVVQFKDMDSNYARRDAFTDSAISAKVNGEHKEKDLEPWDGGETATTEEF
EALETDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLA
EEIESSAQYKARVALENDDRSEEEKYTAVQRNASEREGHSINTRENKYIPPGQRTRDVMS
WGSGRQNSPRMGQPTSGPTPPRSGSHTSEFSLNSAADQRVVNGGVPWPSPCPSPSSRPPS
RYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSP
KAQRHPRGHRVSTGRGSISSGLEFVSHNAPGEVTTPPVARSSPSGGTWSSVVSGVPRLSP
KTHRPRSPRQSNIGNTPPGPILSSPQAGTVPTESMAVPVPAASPTPANPASNRAVTPSSD
AKDSRLQDQRQNSPAGNKENIKPSETSPSFAKAENKGISPIVSEHRKQIDDLKKFKNDFR
LQPSSTPDNVDHLLNKSREGEKSRDMIKDQPEPSPKDVLLETSSASCTSGSSKPSSPCIS
PSASGSSDQKRGPEVTSQGVQTASPGSKHEKEEQEDKKDAAEQVRKSTLNPNAKEFNPRS
FAQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIP
MTPMPVNQAKTYRAGKVPNMPQQRQDQHPQNTLMHPASAAGPPIVATPPAYSAQYVAYSP
QQFPSQPLVQHVPHYQSQHPHVYSPVIQGNTRMMAPPTHAQPGLVSSSATQYGAHEQTHA
MYACPKLPYNKETGPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQHSG
SHTAPSPVQHHQHQAAQALHLANPQQQPAIYHAGLAPTPPSMTPGSNTQSPQSSFPAAQQ
TVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAAIAQ
SALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggttcatatacttacatcagttgttggatccaaatgtgaagtacaagtgaaa
aatggaggtgtatatgaaggagtttttaaaacatatagccctaagtgtgatttagtgctt
gatgctgctcataagaaaactacggactccagccctgggccaaagcgtgaagatatcgtg
gagaggattttgttcaagtgttctgactttgtcgtggtacagttcaaagatatggactcc
aattatgccagaagagatgcatttactgattcagctatcagtgctaaagtaaatggtgaa
cacaaagagaaggaccttgaaccatgggatggaggtgaaactgccaccactgaagagttt
gaggctctcgagactgatgtttctaatggatgggatcccaatgatatgtttcggtataat
gaagaaaattatggtgtagtttccacctatgatagcagtttatcatcatatacggtacca
ttagagagagataactcagaagaatttttaaaacgggaagcaagagcaaaccaattagct
gaagaaattgaatcaagtgctcaatacaaagctcgggtagcccttgaaaatgatgataga
agtgaagaagaaaaatatactgctgttcagagaaatgccagtgaacgtgaggggcacagc
attaacacgagggaaaacaagtacattccacctggacaaagaactcgagatgtcatgtca
tggggaagtggtagacaaaattcaccaaggatgggccagcccacatctggccccacccct
ccaagatctggatctcatacttcagagtttagtctgaattctgcagcagaccaaagagtc
gttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttct
cgctaccagtcaggtcccaactctcttccacctcgggcagccacccctacaaggccgccc
tccaggcccccctcgcggccatccagacccccgtctcacccctctgctcatggttctcca
gctcctgtctctactatgcctaaacgcatgtcttcagaaggcccaccaaggatgtcacca
aaggctcaacgtcaccctcgtggtcaccgagtttctactgggagggggtcaatctccagt
ggtttagaatttgtttcccacaatgcaccaggcgaagtaactacccctcctgtggcacgg
agtagcccctcaggaggaacatggtcatcagtggtcagtggggttccaagattatctcca
aaaacacacagaccaagatctccaagacaaagcaatattggaaatactcctcctggtcca
attctctcttctccccaagctgggactgtgcccacagaatccatggctgtgcctgtgcct
gctgcatctcctacacctgccaatcctgcgtccaacagagcagttaccccatctagtgac
gctaaagattctaggcttcaggatcagaggcaaaattctccagctggaaacaaagaaaat
attaagccaagtgagacttccccaagctttgcaaaagcagaaaataaaggtatatcaccc
attgtttcagaacatagaaaacaaatcgatgacttaaagaaatttaagaatgattttagg
ttacaaccaagttctactcctgacaatgtggatcacctgctcaacaaaagcagagaagga
gaaaagtcaagagatatgatcaaagaccaacctgaacccagccctaaggatgttctcctg
gagaccagcagtgccagctgcacaagtggcagcagcaagccgagcagtccttgcatttct
ccatctgctagtgggagctcagatcagaaaagaggtccggaggtcacttcccaaggtgtg
cagacagccagcccaggaagtaaacatgagaaggaggagcaagaagacaagaaagatgca
gctgagcaagttaggaaatccacattgaatcccaatgcaaaggaattcaaccctcgttct
tttgctcagccaaagccttctaccactcctacttcacctcgtcctcaagcccagccaagc
ccttctatggtgggtcatcaacagccaactccggtctatactcagcctgtttgttttgca
ccaaatatgatgtacccagtcccagtgagcccaggcgtgcagcctctctatcctataccc
atgacgcctatgccagtgaaccaagccaagacatatagagcaggtaaagtaccaaatatg
ccacaacagcggcaggatcagcacccccagaacaccctgatgcaccctgcctctgctgcg
ggccctcccatcgtggccacgccaccagcctattcagcacaatatgtggcctatagccct
cagcagtttcctagtcaacctcttgttcagcacgtgccacattatcaatctcagcatcct
catgtctatagtcctgtaatacagggtaatactagaatgatggcaccaccaacccatgcc
cagcctggtttagtatcctcttcagcaactcagtatggtgctcatgagcagacacatgcg
atgtatgcatgtcccaaattaccatacaacaaggagacaggcccttctttctactttgcc
atttctactggttcccttgctcagcagtatgcccatccgaatgctaccctacacccccat
actccacatcctcagccttctgccactcccactggacaacaacagaaccaacattcggga
agccacactgctcccagccctgtgcagcaccatcagcaccaagctgcacaggcccttcat
ctggcaaacccccagcagcagccggccatttaccacgctggtctggccccgaccccacct
tccatgacaccgggctcaaatacacagtctccacaaagtagtttcccagcagcacaacaa
acagtctttacgattcacccctctcatgttcagcctgcatataccaacccaccccacatg
gcccacgtgcctcaggctcatgtacagtcaggaatggttccttctcatccaactgctcat
gctccaatgatgctaatgacgacccagccacctggcggtccccaggccgccatcgctcaa
agtgcactacagcccattccagtctcgacaacagcgcatttcccttatatgacgcaccct
tcagtacaagcccaccaccaacagcagttgtaa
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