KEGG   Gracilinanus agilis (agile gracile opossum): 123245010
Entry
123245010         CDS       T07702                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
gas  Gracilinanus agilis (agile gracile opossum)
Pathway
gas03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gas00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    123245010 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gas03021]
    123245010 (TAF5L)
   03036 Chromosome and associated proteins [BR:gas03036]
    123245010 (TAF5L)
Transcription machinery [BR:gas03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     123245010 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     123245010 (TAF5L)
Chromosome and associated proteins [BR:gas03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     123245010 (TAF5L)
    STAGA complex
     123245010 (TAF5L)
    TFTC complex
     123245010 (TAF5L)
    SAGA complex
     123245010 (TAF5L)
    SLIK complex
     123245010 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 Tricorn_2nd Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_RFWD3 PEP5_VPS11_N Ge1_WD40 PROPPIN Beta-prop_IP5PC_F eIF2A Beta-prop_NWD2_C WD_LRWD1 Nbas_N Mala_s_1-like
Other DBs
NCBI-GeneID: 123245010
NCBI-ProteinID: XP_044529641
LinkDB
Position
4:complement(158334949..158367371)
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLSQTPEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLHMVQNGLKSTVDSFY
SRFHGMFLQNASQKDVIEQLQTTLTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNSALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSESNGLEPADMPTSILQNEAALD
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDNKLLAAGFDNSCVKLWSLRSK
KLKSEPHQVDVSRIRLACDVLDEEEDDDDNVGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgagtacgcacagaacagattcagatggcagtatcctgctacctcaaacgacgc
caatatgtagattcagaaggccctctaaaacaaggattgcggttgtctcagactcctgaa
gagatggcagctaatctcacagtccaatcagaatctggttgtgccaacatagtgtctgca
gccccctgccaggctgagcctcagcaatatgaagtacagtttggacgattacggaatttt
ctcactgattctgattcccagcacagccatgaagtgatgcctctcctatatcctctcttt
gtctacctccatcttcacatggtccagaatggcctgaagagcacagtggacagtttttac
agccgcttccatggaatgtttttgcagaatgccagccagaaggatgtcattgagcagcta
cagaccactctgaccattcaagacatcctgtccaacttcagactccgggcattcctggat
aataagtatgtggtccgcctccaagaggacagctacaattaccttatccgctacctccaa
agtgacaacaacagtgccctgtgcaaagttctcaccttacacattcatcttgatgtgcag
cctgccaagagaacagactaccagctgtatgccagtggcagctcctcacgaagtgagagc
aatggcctggagccagcagatatgcccacatctattttgcagaatgaggctgctctggat
gtcctgcaagagagcattaagcgagtcaaggatgggcccccttcacttaccacaatttgt
ttctatgccttctataacactgagcaattgttgaacactgcagaaatctccccagacaac
aagctgctagctgctgggtttgataattcctgtgtaaaactttggagcttgagatccaag
aagttaaaatcagagcctcatcaggtggacgtgtctcgcatccgtttggcttgtgatgtt
ctggatgaagaggaagatgatgatgacaacgtgggcacagaaatgaagatcttgagaggg
cattgtgggcctgtgtacagtacaaggttcctatcagacagctcagggttgctatcttgc
tccgaagatatgtctattagatactgggaccttggaagttttaccaatactgtattgtat
caaggccatgcctaccccgtctgggatctggatatcagtccatgcagcctatacttcgcc
agcggttcccatgaccgcactgcaagactctggtcatttgatcggacgtacccattgcga
atatatgcaggacatctagcagatgtggactgtgtaaaattccaccctaattcaaactac
ttagctacgggctcaactgataaaactgttcgtttatggagtactcagcaaggaaattct
gtgaggctcttcacaggtcatcggggtcctgtgctttcacttgcattttctccaaatggt
aagtacttggcatctgccggtgaggaccagcggttgaagctatgggacttggcatctggt
accctctacaaagaattgagaggccacacggacaatatcaccagccttactttcagccca
gatagtagcttgattgcctctgcatccatggataactctgttcgggtttgggatattcgg
aacacttattgcaatgctcctgcagatggttcttccagtgaacttgttggtgtctatact
gggcagatgagtaatgtactgagtgttcagtttatggcctgtaacctccttctagtgact
ggaattacacaagaaaatcaggaacattaa

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