Gracilinanus agilis (agile gracile opossum): 123245339
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Entry
123245339 CDS
T07702
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123245339 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123245339 (THOC5)
03041 Spliceosome [BR:
gas03041
]
123245339 (THOC5)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123245339 (THOC5)
Spliceosome [BR:
gas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123245339 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF4175
Inhibitor_I53
Motif
Other DBs
NCBI-GeneID:
123245339
NCBI-ProteinID:
XP_044530131
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All DBs
Position
1:complement(776076163..776100362)
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AA seq
688 aa
AA seq
DB search
MKKSAMSTESNKKRKPKVIRSDGAPPEGKRNRSEIDLEMKYYSEEAEVDIRDPNKDYDLY
RFTCHELQRLMAEIQELKSRGSRDSASEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQ
THEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSMEEFYREAPPEISK
CDITMGDPHQQTLARLDWELEQRKRLAEKYKECLASKEKILKEIEVKKEYLSSLQPRLSS
IMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLSVAIEGNVE
EAKALYKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLRCK
DDSMLHLTFYYLMNLNIMTVKARVSTATEIVTPVSAGDLLSPDMILSCLYPGDHGKKTPN
PANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQHTVTADNSLSASHMETT
MKLLRTRLQARLALTKQFASLEHGIVPVSSECQRLFPAKIVSRLVKWVAIAYEDYMELPY
TRDIVEAGLAEDTHLYYLALIERGTAKLQAAVVLNPGYSSIPPIFRLCLNWKGEKTSSND
DNIRAMESEVSVCYRELYGPRPGYQLLTNQLQRLCVVLDVYLETESHDTSVEGPKEFPQE
KMCLRLVRGPSRMKPFKYNHPQGFFSHR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcagccatgtccacagaatcaaacaaaaagcggaaacccaaagtgatccga
agtgatggagccccacctgagggaaagcggaatcggagcgagatagacttggagatgaag
tactacagtgaggaggctgaggtggacattcgcgaccccaacaaggactatgacctctac
agatttacctgccatgaactccagcgactcatggctgaaatccaagagctcaagagcaga
ggcagcagggacagtgcttctgaaatagaagagaggaggatccagagctgtgttcatttc
atgaccctgaagaagctgaaccgcctggctcacattagactgaagaaagggcgagatcag
acccatgaggccaagcagaaagtggacgcctatcacctccagctccagaacctactgtat
gaggtgatgcacctccagaaagagatcaccaagtgcctggagtttaaatcaaaacatgaa
gaaattgagctggtaagtatggaagagttttatcgggaggcccctccagagatcagcaaa
tgtgatatcaccatgggggaccctcaccagcagacccttgctcgcctcgactgggagctg
gagcaacggaagaggttagcagaaaagtacaaagaatgtctggctagcaaagagaaaatc
ttgaaggagatcgaagtaaagaaggagtacctgagcagccttcagccgcggctgagcagt
atcatgcaggcctcgcttccagtgcaggaatatctcttcatgccgttcgaccaggcccac
aagcaatatgaaactgctcgacaccttcccccacccctctatgtgctttttgtccaggcc
agtgcctacggacaagcctgtgataaaaagttgtccgtggctatagagggcaatgtggaa
gaagccaaggctctgtacaaaccacctgaggattctcaagatgacgagagcgactctgat
gctgaggaggagcagaccacaaaacgtcgacgccccaccctgggtgttcagctggatgac
aaacggaaggagatgctcaagagacaccctctgtctgtcatgctcgacctcaggtgcaaa
gatgacagcatgctccatcttactttctactacctcatgaacctcaacatcatgactgtg
aaggccagagtgagcactgccactgagatcgtcactcctgtcagcgctggtgacctgctg
tctcctgacatgatcttaagttgcctgtatcctggggatcatggcaagaaaactcccaat
cccgccaatcagtaccagtttgataaagttggcatcttgaccttaagtgactatgtgctt
gaactgggtcacccctatttgtgggtacagaagctcgggggcctgcacttccccaaagag
cagcctcagcacacagtgactgcagacaattcactgagcgccagccacatggagaccacc
atgaagctgctgaggacacggctacaggcccgcctggctctcaccaaacagttcgcttca
ttggaacacggcattgtgccagtctccagtgagtgccagcgccttttccctgcaaaaatt
gtgtctcgccttgtgaagtgggtggcaattgcttatgaagactatatggagctgccttac
acccgggacattgtggaggccgggctagccgaggacacacacctgtattacctggcactc
atcgagagagggacagccaagcttcaggcagccgtggtgctaaacccaggttactcctcc
atcccacccattttccgcctttgtctgaactggaaaggagagaagaccagtagcaacgat
gataacatccgggccatggagagtgaagtcagtgtctgctaccgggagctttacggcccc
cggcctggctaccagcttctgaccaatcagctgcagcgcctctgcgttgtgctagatgtc
tacctggagacagagagccacgacaccagcgtagaggggcccaaggaattcccgcaggag
aaaatgtgtcttcgactggtcaggggtcccagccggatgaagccattcaagtacaaccat
ccccagggattcttcagccatcgctga
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