Gracilinanus agilis (agile gracile opossum): 123245765
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Entry
123245765 CDS
T07702
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123245765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123245765
03019 Messenger RNA biogenesis [BR:
gas03019
]
123245765
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123245765
RNA polymerase I system
123245765
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
123245765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW5_SPT5
Spt5-NGN
KOW2_Spt5
KOW
KOW1_SPT5
KOWx_SPT5
Spt5_N
DUF3912
KOW7_SPT5
CTD
Motif
Other DBs
NCBI-GeneID:
123245765
NCBI-ProteinID:
XP_044530704
LinkDB
All DBs
Position
4:13446668..13449304
Genome browser
AA seq
844 aa
AA seq
DB search
MKKMKKMKPKGQAMFESQSHHLKLSQRGTGKLSQEEDNESSSEAETAMGRAMTVAREDSE
ASQSSGSELSESESSESESELQSDEEESEGEPKEEEVKSAEKRHKSGEEAEEDDEEEEEG
GAEDSVAKGLPGPSEPSASTEENCSSFPRWGNSWREQSVEELAGYFQQKYGRASCGRAKH
RVAEEIPEHISQQRLLPEIKDPKLWLVRCKPGEEKATALTLLRKFVAYQKTDSPLLIKSV
VAPEYLKGYIYVEAYKASHVLQAIEGVASLRQGCLHPQQVPIQEMTDVLKVLSKEVPSLQ
PKSWVRVRTGLYRHDLAQVTRVESDQSSVSLKLIPRIDYGLLAGGQQPPEGLAKRQRLQR
RPPRQLLDAHKIRSLGGKLTVDGDFLVFRGNRYSHRGFLFKTMGVSCVLREGVKPTLAEL
QQFEERPEALQALKLATEDSSAEHSFRPGDKVQVSSGELLHLQGWVVSVQGPRILMMPQH
ELLREALEFSAWELRKDFGVGDRVQVISGRYRGTSGFVLRVEATFILLFSDLSQQELQVL
PRDLQLIGDSASALDLRSQQQRWGQLVQLQPHTVGIVVGLEDEADTCRVLDMGGKLLAVR
SRAVTDRRYDPRAVALDSGQNELRPRAVVKVLEGPHSGLEASILHLFRGVAFLHSRKVLD
HGGLFVCKSRHLLLSEASQAPRAKDLPARDLAPGARNPPPVTLRSPGALTGPRDQALGRA
AGAGQGQGIKDLVGQSVRICQGPYKGYIGMVKEATESLARVELHTTCQTISVQPQRLARL
GTPSSRSQISTSHTTPSSGSQTPIYSLGSFTPLYGCGTPMAQGDQTPGSSPFPSPRKGHP
YFRW
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatgaagaagatgaagcccaaaggccaggcgatgtttgagagtcagtctcac
cacctgaagttgtctcagcgtggcactggcaagttatctcaggaagaggataacgaaagc
agcagcgaagccgagacagcaatggggagagccatgacagtagccagggaggattcagag
gcttcccagtcatctgggtccgagttgtcagagtctgaatcttctgagtccgaatcggag
ttacaatcagatgaggaggagtctgagggggaaccaaaggaagaggaggtgaagagtgct
gaaaagaggcacaaaagcggcgaagaggctgaggaggatgacgaggaggaggaggaagga
ggggccgaggactcggtggccaaagggctacctggccccagcgagccttcggccagcaca
gaggaaaactgctcgtccttcccacgctgggggaattcctggagggagcagtccgtggaa
gagctggccggctatttccagcagaaatacgggcgggcatcgtgcggccgggctaagcac
agagtcgcagaggagatcccggagcacatcagccagcagaggctgcttcctgagattaag
gatcccaagctgtggctggtacggtgcaagccgggcgaggaaaaagccacagccttgacc
ctcctgaggaagttcgtggcctaccagaagacagacagccccctgctgatcaagtccgtg
gtggccccggagtacctcaagggctacatctacgtggaggcctacaaggccagccacgtc
ctgcaggccatcgaaggcgtggccagcctgcggcagggctgcctgcacccgcagcaggtg
cccatccaggagatgacggacgtgctcaaggtgctgtccaaggaggtccccagcctgcag
cccaagagctgggtgcgagtgaggacaggcctgtaccggcatgacctggctcaggtgact
cgggtggagtcggaccaaagcagtgtctccctcaagctgattcctcgaatagactacggc
ctcctggcaggcggccagcagcccccagagggcttggccaagaggcagcggttgcagaga
agacccccgcggcagctgctggatgcgcacaagattcgctctctgggaggcaagctgact
gtggacggagattttctcgtcttccggggcaaccgctacagccaccgaggcttcctcttc
aagaccatgggcgtctcttgcgtcctccgggagggcgtgaagcccacgctggccgagctg
cagcagttcgaggagcggccggaggccctgcaagccctgaagttggccaccgaggacagc
tccgcggagcacagcttcaggccgggagacaaggtgcaagtgagctccggggagctcctc
cacctgcagggctgggtggtcagcgtgcagggccccaggatcttgatgatgccccagcac
gagctgctgcgcgaagcgctcgagttctctgcctgggagctgcgcaaggactttggcgtc
ggggaccgcgttcaagtgatctcaggccgctatcgcggcacttcgggcttcgtgctgagg
gtggaggccaccttcatcctcctcttcagcgacctcagccagcaggagctccaggtcctc
cccagagacttgcagctgatcggggactcagcctcggcgctcgacctgcgcagccagcag
cagcgctggggccagctggtgcagctgcagccccacacggtgggcatcgtggtgggccta
gaagacgaagcagacacttgccgggtcctggacatgggaggcaagctgctcgcggtgcgc
agccgggcagtcacagacaggaggtacgacccgagggctgtggcgctggactcgggccag
aacgagcttcgcccccgggcggtggtcaaggtcctggaaggtccgcactccggcctcgag
gccagcatcctccacctcttccgaggagtcgcctttctccactccaggaaggtcctggac
cacgggggcctcttcgtctgcaagtcccgccacctcctgctcagtgaggccagccaggcc
ccgcgggccaaagacctcccagcgcgggacttggcgcctggcgcccgcaatcctcctccc
gtcactctcaggtcccctggtgccctcacagggcctagggaccaagcactggggagggca
gcgggtgctggccaaggccagggaatcaaggatctggtgggtcagtctgtgcgcatctgc
caggggccctacaagggctacatcgggatggtgaaggaggccacagaatcccttgcccgg
gtggagctgcacaccacgtgccagaccatttccgtgcaaccccagagactggcccgcctt
ggcaccccgagctccagaagccagatctccacctctcacactacccccagctctggctcc
cagacacccatctacagcctgggctcctttacccccctctatggttgtgggacccccatg
gcccagggtgaccaaactccaggctccagtcccttcccttctcccagaaagggtcaccca
tacttcaggtggtag
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