Gracilinanus agilis (agile gracile opossum): 123245844
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Entry
123245844 CDS
T07702
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123245844 (HFM1)
Enzymes [BR:
gas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123245844 (HFM1)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Meiosis-specific proteins
Others
123245844 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Hfq
Motif
Other DBs
NCBI-GeneID:
123245844
NCBI-ProteinID:
XP_044530775
LinkDB
All DBs
Position
4:37203931..37369421
Genome browser
AA seq
1435 aa
AA seq
DB search
MFNSDDCPFSLNSLFFVRPDQTEEYTNDKKPSCWFLPPAPLISEIPDTQVLQEELERFKP
LEHTKNKEMFTSHLKTLNEATVCTSPTQAFQFDFYSNKSRGIMPNVGMTNKDYLPASTVK
LSYGSVHQYQNHTGAEETTEGIVSSDRKLIDFSENDETETVPLTFRKRLFKTSNCPQRNT
DYSDRPALDFHTDPGENLKTKMNKGELWKESVSKQKPPYSNVNLFTTRDALFASDTGEGI
FKTQNLTNAPESFGTQGTAEKDFCSLKSVTEIPAQFRSIFKEFPYFNYIQSKALDDLLYT
DRNFVVCAPTGSGKTAIFELAITRLLMEIPLPWLNVKIVYMAPIKALCSQRFDDWKKKFG
PIGLTCKELTGDTAMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHV
VKDENRGPTLEVVVSRMKTISSLSQISENSSAAILVRFVAVSATIPNVDDIAEWLSDGKR
PAKCLKIDENHRPVKLRKVILGFPWSSNQNEFKFDLSLNYKVASVIQTYSNQKPTLVFCA
TRKGVQQAASVLSKNAKFVMTMGQKQRLQKCTHSLRDSKLRDLLTCGIGYHHAGMELSDR
KIVEEAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYVGGMFEEYSETDILQMIGRA
GRPQFDTTATAVIMTRLSTREKYEQMLTGTDTIESSLHRHLIEHLNAEIVLHTITDVNVA
LEWIRSTLLYIRALKNPAHYGFASGLDKNGIESKLQELCLKNLNDLSSVDLIKMDEDINF
KSTEAGRLMAWYYITFETVKKFCTINGTETLSELVTMIAGCKEFLDVQLRINEKKTLNTL
NKDQNRITIRFPMEGRIKTREMKVNCLIQAQLGCLPIQDFSLTQDTAKIFRSGTRITKWL
SEYLAMKEKKFAVLLNSLILAKCFRAKLWENSLHVSKQLEKIGVTLSNAMANAGLTSFKK
IEDINARELELILNRHPPFGNQIKETVKHLPKYELEVEQISRYSNTGAELLVTVFLRNFE
QLQTKRTAPDSHYVTLIIGDADNQVVFKHKLMDSVLLKTGNWTKKIDVKRALQSEDLSIN
LISSEYVGLDIQQIFTAFYIGPNRFENQITMQRNVETETHSRHSDGSPREDVSAGSTSNR
KNTCKISGNRDCHHHCKNKDTCGHDCCKIGVAQKSEVKVPTFSSYLTDLRHRDAISSVPP
VKRLKMQINKSQNVDLKKFSFAPRALLPVFPRSKCTQISTSSLVKKWDSSEVCGKSQQQP
LSTYYGEKDLLNVNFELGDEVWDDLNDETLINATTSMVSVFNSLSLTPARPSFQAGVFAS
LEISGAAGDSAQPIGERSWDPPSISSDPTVQEFKTFSCWAGFQNRSQNPLKKILISPSKE
PLCTAITWAIEAVAIPVTGQLHGCNRYLEQLCLKRRRALGLTGRKWMLGSVLERR
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcagatgattgccctttttcgctgaatagtttgttttttgtaagaccagat
caaactgaagagtatactaatgataaaaaaccgtcatgttggtttcttccacctgctcca
ttgatttctgaaattccagatactcaggtgttacaagaagaattagaaagattcaaacca
ttagagcacacaaagaataaagaaatgtttacctcacatttgaagacacttaatgaagct
acagtttgtacatcaccaacacaagcattccagtttgacttttactccaacaaaagcaga
ggaataatgccaaatgtaggaatgacaaataaagactatttgcctgccagtactgtcaag
ctgagttatggttctgtacatcaataccaaaatcacactggggctgaagagacaactgag
ggaattgtctcaagtgatagaaaattgattgatttctcagaaaatgacgaaactgagact
gttcctttaacattccggaaaagattatttaaaacatctaactgtccacagagaaataca
gattacagtgacagacctgctttggattttcatactgacccaggggaaaatcttaaaact
aagatgaataaaggggaattatggaaagagagtgttagtaagcagaagccaccatattca
aatgttaatctctttactacaagggatgccctctttgcttctgatactggagaaggcatt
ttcaaaacacaaaacttaacaaatgctccagaatcttttggtactcaagggacagcagaa
aaagatttttgttccttgaagtctgttacagaaatccctgcacaatttagaagcattttc
aaagaatttccatatttcaactatatacagtctaaggctttggatgatcttctttataca
gataggaattttgtggtttgtgctccaactggttctgggaaaactgcaatatttgaactt
gctataacaagattattaatggaaataccactaccctggctgaatgttaaaattgtttac
atggcaccaattaaagctttatgtagtcagcgctttgatgactggaaaaaaaaatttggg
ccaataggattgacttgtaaagaacttactggagatacagccatggatgacctgtttgag
attcagcatgctcatattattatgacaactccagaaaaatgggatagcatgacaaggaaa
tggagagacaactctttggtccaattggttcgactgttcctcattgatgaggtacatgtt
gtgaaagatgaaaaccgtggtccaactcttgaagttgtggtcagtcgaatgaaaactata
tcttccttatctcaaatctcagaaaattccagtgctgctattctggtgagatttgtggct
gtatctgcaacaattccaaatgtagatgatattgcagagtggctttcagatggcaagagg
cctgctaagtgcctgaagatagatgagaatcacaggccagtgaaactccgcaaagtcatc
cttggatttccatggagtagtaaccaaaatgagtttaagtttgatttatctctcaattac
aaagtcgccagtgtcatacaaacttactctaatcagaaaccaacccttgtgttttgtgcc
acaaggaaaggtgtgcagcaagcagcttcagttctctcaaaaaatgctaaatttgtcatg
acaatgggacagaaacaaaggttacaaaaatgtacacattccctaagagattccaaactg
agagatctcttaacatgtggtattggttaccatcatgctggtatggagctatcagacaga
aaaattgttgaggaagcatttacagttggagatttaccagtcctttttactaccagtacc
ttagctatgggagtaaatttgccagcccatcttgtagttataaagtctacaatgcactat
gttggaggaatgtttgaagagtacagtgaaacagatattctgcaaatgattggtagggct
ggccgtcctcaatttgacactacagccactgcagttatcatgactaggctgagtacaagg
gagaagtatgagcagatgctaactggcactgataccatagagagcagtttgcacaggcac
ctaattgaacatttaaatgcagaaatagtattgcataccatcacagatgtcaatgtagct
ttggaatggatacgatcaaccttgctttacatcagagccttgaaaaatccagctcattat
ggttttgcatctggattggacaaaaatggaattgaatcaaaattacaagaattgtgtttg
aagaatttgaatgatttatcttctgttgacttgataaagatggatgaagatattaatttc
aaatcaactgaggcaggaagattaatggcatggtattatattacatttgagacagtgaag
aaattttgtacaattaatggaacagaaaccttatcagaattggtcacaatgatagctggc
tgtaaagaatttctagatgtgcagttaagaataaatgaaaagaaaacactgaacacttta
aataaagaccaaaacaggataactatcaggtttccaatggaaggaagaataaaaacaaga
gaaatgaaagtaaattgtcttattcaggctcaacttggatgcctccctattcaggacttc
tctttgacacaagacacagctaaaattttcagaagtggcacaagaataacaaaatggttg
tcagagtatctggcaatgaaagaaaagaagtttgcggtcctattaaacagtttaatttta
gctaaatgctttcgggctaagctttgggaaaattctctgcatgtatccaaacagctagaa
aaaataggtgtaacattgtcaaatgctatggcaaatgcaggcctgacttcctttaagaaa
atagaagatattaatgctagagaacttgaattgattttaaatagacatcccccttttgga
aaccaaattaaagaaacagttaaacatctaccaaaatatgaacttgaagttgagcagatt
tcaaggtatagtaacaccggagctgaactcttagtgactgtcttcctaagaaactttgag
caacttcagactaaaagaacagcaccagattctcactatgtgaccttgataataggagat
gcagataaccaagtagtttttaaacataaacttatggattctgttttactaaaaactgga
aattggactaaaaaaattgatgttaaaagagctcttcaatctgaagaccttagcattaat
ctaattagttctgaatatgtgggacttgatattcaacagatatttacagccttttacata
ggacccaacaggtttgaaaatcaaataactatgcaaagaaatgtagaaacagagacacat
tcaagacattcagatggctctccaagagaagatgttagtgcaggaagcacctccaacaga
aagaacacttgcaaaatatctggaaatagagattgccaccatcactgtaaaaataaagat
acatgtggacatgattgctgtaaaattggagttgcacaaaagtccgaagtgaaagtgcca
acattttcttcctacttaactgatttaagacatagggatgccatttcatctgttcctcca
gttaaacgcctcaagatgcagataaataaatctcaaaatgtggatcttaagaaatttagt
tttgcgccgagagctttgcttccagtttttccaaggtcgaagtgtacacaaatttctaca
tcctctttagtgaaaaaatgggattcttctgaagtctgtggaaaatcccagcaacaacca
ctatctacttattatggagaaaaggaccttttgaatgtgaacttcgaattgggggatgaa
gtttgggatgatttaaatgatgaaacattaataaatgcaaccacctccatggtgtctgtg
ttcaactccttgagtctgacgccagcaaggccctctttccaggctggtgtgtttgccagc
ctggagatttcaggggccgctggagactccgcacagcccattggggagaggtcctgggat
cccccttctatttcctcagacccaacagttcaagaattcaagactttttcttgttgggct
ggcttccagaaccgaagtcaaaatccactcaagaaaatcttgatcagccccagtaaagaa
cccctttgcacggctattacatgggccatagaagcagtagctatacctgtgacaggacag
ctgcatggctgcaatcgctacctggaacagctttgcctaaaaagacggcgagccctgggg
ctgacgggaagaaaatggatgctgggttctgtcctagaaagaagataa
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