Gracilinanus agilis (agile gracile opossum): 123246015
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Entry
123246015 CDS
T07702
Symbol
HNRNPU
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123246015 (HNRNPU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gas03041
]
123246015 (HNRNPU)
Spliceosome [BR:
gas03041
]
Common components
Common spliceosomal components
hnRNP proteins
123246015 (HNRNPU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SRP54
AAA_17
Motif
Other DBs
NCBI-GeneID:
123246015
NCBI-ProteinID:
XP_044530913
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All DBs
Position
4:140285570..140295193
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AA seq
621 aa
AA seq
DB search
MGFIKTRKRRRLTRQAFFKLCKLLMERDGKTEQKGGDKKRGVKRPREDHGRGYFEYIEEN
KYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGR
ASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLK
GIKTCNCETEDYGDKFDENDVISCFANFEGEEVELSYAKNGQDLGVAFKINKEVLAGRPL
FPHVLCHNCAVEFNFGQKEEPYFPIPEEYTFIQNVSLDDRVRGPKGPDEKKDCEVVMMIG
LPGAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLG
KFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVE
GKDLPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEESKKSLPPEKKQN
TGSKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGG
GSGGIGYPYPRGPVFPSRGGYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQ
WQQGQFWGQKPWSQHYHQGYY
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggatttattaaaacccggaaaagacgcaggttaacacggcaagctttttttaagctt
tgcaaattactgatggaacgagatggcaaaacagaacagaaaggtggagacaaaaagaga
ggtgttaaaagacctcgtgaagatcatggccggggctattttgagtacattgaagaaaat
aaatacagcagagctaaatctcctcagcctccggttgaagaggaagatgaacattttgat
gacacagtggtttgtcttgatacttataattgtgatctacattttaaaatttcaagagac
cgtctcagtgcttcttcactaactatggagagttttgcttttctttgggctggtggaaga
gcttcttatggagtttcaaaaggcaaagtttgttttgagatgaaggttacagagaagatc
ccagtgaggcatttatatacaaaagatattgacatacatgaagtacggattggctggtca
cttacaaccagtggaatgttacttggtgaagaagaattttcttatgggtattcgctaaaa
ggaataaaaacatgcaactgtgagactgaagactatggggacaagtttgatgaaaatgat
gtgatttcatgttttgctaattttgaaggcgaagaagtggagctttcctatgcaaagaat
ggacaagaccttggtgttgccttcaaaattaacaaggaagttcttgctggacgacctctc
ttccctcatgttctctgccataactgtgcagttgagtttaattttggtcagaaggaagag
ccatatttcccaatacctgaagaatatactttcatacagaatgtctccttagatgatcga
gttagagggccaaaaggaccagatgagaagaaagattgtgaagttgtgatgatgattggc
ttgccaggagctggaaaaaccacctgggttactaagcatgcagcagaaaatcctggtaaa
tacaatattctgggaacaaacactattatggataaaatgatggtggcaggctttaagaga
cagatggcagatactggaaaattgaacacgctgttgcagagagccccacagtgtcttgga
aaattcattgagatagctgctcgtaagaagcggaactttattctggatcagacaaatgtg
tctgcagctgcccagaggagaaaaatgtgcctgtttgcaggctttcaacgcaaagctgtg
gtagtttgcccaaaagatgaagactacaagcaaagaacacagaagaaggcagaggtggag
ggaaaggatcttccagaacatgcagttctcaaaatgaaagggaactttacactgccagag
gtagcggagtgttttgatgaaataacctatgtagagctgcaaaaagaagaagcccaaaag
ctgttggagcagtataaggaagaaagtaaaaaatctcttcctccagaaaagaaacagaat
actggctcaaagaagagcaataagaataagagtggcaaaaaccagtttaatagaggaggt
ggtcatagaggacgtggaggatttaacatgcgtggtggaaactttagaggaggtgctcct
ggaaatcgtggtggttataataggaggggaaatatgccacagcgtggtggtggaggagga
ggaagtggaggaattggctatccataccctcgtggccctgtctttcccagcagaggtgga
tattcaaacagaggcaactacaacagaggtggaatgcccaacagggggaactacaaccag
aacttcagaggccgaggaaacaatcgtggctacaaaaatcaatctcagggctacaaccag
tggcagcagggtcaattctggggtcagaagccatggagtcagcattatcaccaaggatat
tattga
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