Gracilinanus agilis (agile gracile opossum): 123246028
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Entry
123246028 CDS
T07702
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gas03016
]
123246028 (TARBP1)
03036 Chromosome and associated proteins [BR:
gas03036
]
123246028 (TARBP1)
Enzymes [BR:
gas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
123246028 (TARBP1)
Transfer RNA biogenesis [BR:
gas03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
123246028 (TARBP1)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123246028 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
DUF1484
Motif
Other DBs
NCBI-GeneID:
123246028
NCBI-ProteinID:
XP_044530921
LinkDB
All DBs
Position
4:153012705..153115960
Genome browser
AA seq
1558 aa
AA seq
DB search
MERVLAQALLSQSPDPRALLGAFCVWESPVPAERVETLRFLLQRLEEEQEVGSNASARPA
TQLLQEAVREVATGHLVPLLRGLRACRTGAPAGEPSTPRDRRRRVLRAAGGALRSCARLS
GCPQLAVGLVQEALCDLLSPRPALGAEEAIEVLVALGPCLRPQEDRVLLEHLAREALAVA
LGDEDDEESGGEDGAATLVAARLLPALGRSCAAALQVLWDGLLPLEKEEPERLDSAPLAL
RVDRRLLVLSNLAEKLLPTPGVGGAWDAPEEEMPDARRCSRFWRAVQAGLVQADGLTRKR
ARYLLQRAVEASAGLGTECSSGAPDANEPSLFWWSEKKKEEFLKFWENYILIMETLEGNQ
EQGKKDRSPIRSPGHKIGSCSPLGMKLQTFLVTYVSLLSEDIKSSFLLKFIKKMTSRHWC
AVPILFLSRALAHIPRCKVLGVEGLLALRDVLQCTMITHQILLRGAAQCYLLQTAMNLID
VEKVSFSDVSNFLMSLRQEESLGRGTALWTELCDWLRVNENYFGEICNCIDFSGRSSLNV
YVQSLVQDYIKSPTLETGGNCFMPDWYEAKLVALMILLAADVEEMKNKYSERKKTQNELK
AFLHPLMDSLMKLGTNAYIPLLKTDKCLQLLLKLLHTSSLKSPLVQDDGVLTLLQNSVMC
TTESIFEFIVRRLTASELKTVSDLERCHLYLTILNELVNLHGKIGWKNNNSIWRFISLLK
NASILHLQDVNSEKEPILGKQIQKVVSMECLAMVCGILSQKSGLHLDSLDIGILERFISS
FHLNQIVRKPHSEEQNRFVHLFLLKILFEESSSSQGWGRIVAQYVHDQWLCLSFLLNKYH
TLIPNTEDEMLESFLHVSKPVSTLQSALEALTILPSDQVLPVFHCMKILVPKLLCSSESL
CIESFDMAWKIIYSLSNTQLIFWSNLKAFVQFVFDIRVLTVAARTKGRAYSKIKEIIYKI
IEMSTTKTGVFNILINYCCQSWIVPTSDDLTLSQDQFFNARDYIELIIEGCIFGNVFRRD
QRLIQDVQAFIENLGHECAANIVTENTNRDDHYVRVCAIKFLCLLDGSNISHKMFIEDLA
IKLLDKDVLVSRSKTRYYVNSLQHRVKNRVWQALLVLFPKFDQNFLDKIIGKIFEAGFVN
NQASIKYLIEWIIILILHKFPQFLPKFWNCFCYGEEKLKMSICTFLSVLSHLDIIIQNIS
DMKPVLKQALTVVLQWCFNHNFSVRLYALLALKKIWAMCKTLHVEEFDALTAVIESSLHQ
VENMHGAGNAKKNWQRIQEHFFFATFHPLKDYSLETIFYTLPRLSELVEDEWITISKFIK
FTDIPIDSAFQWYLSQTELCELKPSDWSQQDIGSNSVDGDNQSEWIDVQKKMIPWKNNVP
DLELELIFPDRAAKLGKSISRLIVVASLIDKPTNLGGLCRTCEIFGASVLVVGSLHCIND
KQFQHLSVSAEQWLPLVEVKPLQLVDYLQKKKTEGYTTIGVEQTAKSSDLTEYCFPEKSL
LLLGNEREGIPANLIQHVDVCVEIPQHGIIRSLNVHVSGALLIWEYTRQQIIKQRDLK
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtccttgcccaagcgctactctctcagagccccgacccccgcgccctgctc
ggggcattctgcgtgtgggagtccccagttcctgcagagcgcgtggagacgctacggttt
cttcttcagcggctcgaagaggagcaggaggttggcagcaacgcgagtgcgcgtcctgcg
acgcagctgttgcaggaggctgtgcgcgaggtcgctaccggccaccttgtgcctttgctt
cggggcctgcgggcctgccggaccggggcgcctgccggggagccctcgacgcctcgtgac
cgccggcgccgcgtgcttagggccgcgggcggggccctgcgctcgtgcgcccgcctatcc
gggtgtccccagctggctgtcggactggtgcaggaggcactttgcgacctgctctccccg
aggcctgctctgggcgccgaggaggccatcgaggttctggtggcattgggcccctgcctg
cggccccaagaggaccgagtgctgctggagcacctggcccgggaggctttggctgtggcg
ctgggggacgaggacgatgaggaatccggtggtgaagatggggctgcgacgctggtggcg
gcacgactgctccccgcattgggtaggagctgcgcggccgcgctccaagtgctgtgggac
gggctcctgcccctagagaaggaggagccggaaaggctggactctgcgccactcgctctc
cgcgtcgaccggcggctgctggtgctgagcaacctggctgagaagctgttgcccacccca
ggtgtaggcggagcttgggatgccccggaggaggagatgcctgatgcgaggcggtgctcg
cgcttctggagggcagtacaggctggcttggtgcaagctgatgggctgacccgcaagaga
gcccgctatctgctgcagagggcagtggaggcttctgcagggttggggaccgaatgcagc
agcggggcccctgatgcaaacgaaccgagtctgttttggtggtcagagaagaaaaaagaa
gaattcttgaaattttgggaaaactatattttaataatggaaacacttgaaggaaatcag
gagcaagggaaaaaagatagatctcccataaggtccccaggccacaagataggaagctgt
tcccctttgggaatgaaattacagacatttttagtcacttatgtttccctcctttcagaa
gacataaagagtagtttcctattgaaatttattaagaagatgacaagtaggcactggtgt
gccgttcccattttattcctgtccagggctctggcacatatcccaagatgtaaagtgctt
ggggtagaaggccttcttgctctcagggatgttcttcagtgtactatgatcacacatcag
attcttttgaggggagcagctcagtgctatcttcttcaaacagctatgaatttgattgat
gtggaaaaggtgtcattttcagatgtttcaaatttcctcatgtccttgagacaagaggaa
tccttaggcagaggtactgcactatggacagagctctgtgactggttgcgggttaatgag
aactactttggagaaatctgcaattgcattgacttttctggcaggagttccttaaatgtg
tatgtacagagcctagtgcaagactatattaagtcacctaccttggaaacaggaggaaat
tgctttatgcctgattggtacgaagctaaacttgttgctctgatgatcctgcttgctgca
gatgtggaggaaatgaaaaataaatatagtgaaaggaagaaaacacagaatgaattaaag
gctttcctgcatcctcttatggattcccttatgaagcttggtacaaatgcttatataccc
ttgctgaaaacagacaaatgcttacagttgttgttgaaattattgcacacttcttcactg
aaaagtcccctagtacaagatgatggggtgttaactcttcttcaaaattctgtcatgtgt
actacagaaagtatttttgaatttattgtcagaagactgacagccagtgaactgaaaact
gtttcagatctagaacgttgtcacttatatttaacaatattaaatgaacttgtgaattta
catggaaagattggttggaaaaacaataactccatttggagattcatttctcttttaaaa
aatgcatctattctacatcttcaggatgtcaatagtgaaaaggaaccaatacttggtaaa
cagattcagaaagtagttagtatggaatgtttagcaatggtctgtgggatcctctcccag
aagtcaggtctgcatcttgattccctagatattggaattttggaaagattcatttcttct
tttcacctcaaccagatagtaagaaagccacattctgaggaacaaaacaggtttgttcat
cttttcttgcttaagattttatttgaagaatcatcctcttcccagggctggggtagaata
gttgcacagtatgttcatgatcaatggctctgcctctcattcctattaaacaaatatcat
acccttataccaaacacggaggatgagatgctggaatcctttctacatgtttcaaagcca
gtaagcactttgcagtctgcattagaagccctaacaattcttccttctgatcaagtttta
ccagtgtttcattgcatgaaaatactggttcctaagcttctttgctcctctgaatcactc
tgcattgagtcttttgatatggcttggaaaattatatattctttgagcaacacgcaactg
atattctggtctaatttaaaagcttttgtccagtttgtctttgatatcagagttcttact
gtggctgccagaaccaagggccgggcatattcaaaaataaaggagattatatataagata
atcgaaatgtccacaacaaagactggggttttcaatatactcataaattattgctgtcaa
tcttggatagttcctacttcagatgatttgactctctcccaagatcaattcttcaatgct
agagattatattgaacttattattgagggttgcatctttggaaatgtgtttaggcgagat
cagaggcttatacaggacgtacaagccttcatagaaaatcttggacatgaatgtgcagca
aatattgtcacagaaaataccaacagagatgaccattatgtgagagtttgtgctatcaaa
ttcctttgtttattggatggatcaaatatttcccacaagatgtttatagaagatcttgca
atcaagctactagataaagatgttctggtatccaggtctaaaacgcgttactatgtgaat
tctttgcaacatagagtaaaaaatagagtatggcaggctctacttgttctctttcccaaa
tttgaccagaacttcctggataagattattggcaagatttttgaagcaggatttgtcaat
aaccaagcatccataaaatatttaatagaatggattattatattgattcttcataaattt
cctcagtttcttccaaagttctggaattgtttttgttatggtgaagaaaagctcaaaatg
agtatctgcacatttttatctgttttgtcacatttggatatcattattcagaatatatct
gatatgaaaccagttctaaaacaggctcttactgttgttctgcagtggtgtttcaaccat
aatttcagtgttcgactttatgctttattagctcttaagaaaatctgggctatgtgcaaa
actttgcatgtagaggagtttgatgctttgactgctgttatagaatccagccttcatcag
gtggaaaacatgcatggagcagggaatgccaaaaagaattggcaaagaattcaagagcat
ttcttttttgcaacgttccatccacttaaggattatagcctagagaccatattttatacc
cttccacgtctttcagaacttgttgaagatgagtggatcaccattagtaaatttataaaa
ttcactgacattccaatagattcagcatttcagtggtacctttctcaaactgaactttgt
gaactaaaaccaagtgactggtctcagcaagatataggttccaattcagttgatggagac
aatcaatcagagtggattgatgttcaaaagaaaatgatcccttggaaaaataatgttcct
gatttagaacttgaattgatatttccagatcgtgctgccaaacttggaaaatccattagt
agactgattgtagtagcttcactcattgataaaccaaccaatttaggaggtttgtgccgg
acctgtgaaatatttggggcctcagttctagtagtaggtagtcttcactgtatcaatgat
aagcaatttcaacatctcagtgtttctgcagaacagtggcttcctctggtggaggtaaaa
ccacttcagcttgttgattacttacagaagaaaaaaacagaaggctatactaccataggt
gtagaacaaactgccaaaagttcagacttaacagaatattgttttcctgagaaatctctg
ctcttattgggaaatgaacgtgaaggaattccagcaaacctgattcagcatgtggatgta
tgtgtggaaattcctcagcatggcatcatacgttcccttaatgttcatgtgagtggggct
ctgctgatttgggagtatacaaggcaacagataatcaagcaaagagatttaaagtga
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integrated database retrieval system
