Gracilinanus agilis (agile gracile opossum): 123246161
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Entry
123246161 CDS
T07702
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03013
Nucleocytoplasmic transport
gas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123246161 (CASC3)
03015 mRNA surveillance pathway
123246161 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123246161 (CASC3)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123246161 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
123246161
NCBI-ProteinID:
XP_044531034
LinkDB
All DBs
Position
4:complement(192705101..192742065)
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AA seq
663 aa
AA seq
DB search
MPEVIALHQWVGAQVIVNEQTVLSDYESAEDSEGEEEYSEEESSKVELKSEANDAANSLA
KEEKGEEKPDPKGTVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKNPAYIPRKGL
FFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSA
HNPDDIKPRRLRKSRFGSSPQREPNWGNDRPNKPPRHQGSGGSSLPPRTFVNRNAAGTGR
MPTSRNFSRSGSYKEGRTGFRSSESSGQHSVYSDESDRYENGYRSRRLDYAQTRDPSPEM
EFSHGFGSPEKEEAISEPPTPDIAPPPPDRPVEKKSYSRARRSRNKAGDASKLAEELPPP
VEVPAPAPPPPAATPPPPSPPPPPPPPPPPSSSSSSSSSSSSSSSKTGNWEAPVDSSTGG
LEQDMTQLNLTEQNWSSGQQPQFLQPRELRGIPNHMHLGAGPPPQFNRMEEMSVQGNRAK
RYSSQRQRPVPEPPAPPVHISIMEGHYYDPMQFQGPIYTHSDSPTPMPPQGMIVQPEMHL
PHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGSPSYPYAPG
ALPPPPPPHLYPNTQAQSQVYGGVTYYNPVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSR
GSS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagtcattgctctgcaccagtgggtgggtgctcaggtcatagttaatgaacag
actgttctctcagattatgaaagtgcagaggattcagaaggagaggaagaatatagtgaa
gaagaaagttccaaagtggagctgaagtcagaagccaatgatgctgcaaattctttggca
aaagaagagaagggggaagaaaagccggacccaaaaggcactgtgaccggagagagacag
agtggagatgggcaagaaagcacggagcctgtagaaaacaaggtgggtaaaaaggtgcca
aagcatttggatgatgatgaagatcggaagaaccctgcctatatccccaggaaagggctc
ttctttgagcatgacctccgaggccaaacccaagaagaagaagtcagacccaaaggacgt
cagcggaagctgtggaaggatgagggccggtgggagcatgacaagttccgagaagatgaa
caagcacctaagtctcgtcaggagctcatagccctctatggctatgatattcgatcagct
cacaacccagatgacatcaaaccccggagactccgtaaatccaggtttggaagctctcca
cagagggaaccaaactggggcaatgaccgaccaaacaagcctccccgtcaccagggctct
gggggatcctcgttgccaccaagaacattcgtcaatcggaatgctgctggtacaggcaga
atgcctacatctaggaacttctctcgatctgggagctacaaggaaggaaggactgggttt
aggtcttcagaaagtagtgggcagcatagtgtttactctgatgaatctgataggtatgaa
aatggttatcgttctcggcgcctggactatgctcaaactagggacccatccccagaaatg
gagttttcccatgggtttggcagccctgaaaaagaggaagccatttcagagcctccaacc
cctgatattgcaccaccacccccagacagaccagttgaaaagaagtcttactctcgagca
agaagatccagaaacaaagctggagatgcaagcaagctggcagaggaattgccacctcct
gtggaggtgccagcccctgcacctccaccccctgcagctacccctcccccaccatcacca
ccaccaccaccgccaccaccaccaccaccctcttcctcttcctcttcttcctcctcttct
tcctcttcctcctccaagactgggaattgggaggccccagtggactccagcacaggagga
cttgaacaagacatgactcaattgaatctgactgaacagaattggagctcagggcagcag
cctcagtttctccaaccaagggagcttcgaggtatccccaaccacatgcacctgggagca
ggccctccacctcagtttaaccgtatggaagaaatgagtgttcagggtaatcgagccaaa
cgatattcatcccagcgtcagagacctgttcctgaaccacctgccccacctgtgcacatt
agtatcatggaagggcactactatgacccaatgcaattccaaggaccaatttacacccac
agtgacagccctaccccaatgcctccccaaggcatgattgtacaaccagaaatgcacctc
ccccaccctggcttacatccccatcagacgccggcacctctgcctaacccgggtctgtac
cccccgccagtgtccatgtccccaggacagccaccaccccagcagctgcttgcccctacc
tacttctccgctccaggtgtcatgaacttcggcagtcccagctatccctatgccccaggg
gcactgccccctcccccacctcctcacctgtaccccaatacccaggctcagtctcaggtg
tatggaggagtaacctattataacccggtccagcaacaggtgcagccaaaaccttctcca
cccagacggacatcccagccggttaccatcaagccccctccacctgaggttgtaagcagg
ggctccagttaa
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