Gracilinanus agilis (agile gracile opossum): 123246539
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Entry
123246539 CDS
T07702
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04140
Autophagy - animal
gas04148
Efferocytosis
gas05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123246539 (VPS41)
04148 Efferocytosis
123246539 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123246539 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123246539 (VPS41)
Membrane trafficking [BR:
gas04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
123246539 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
123246539
NCBI-ProteinID:
XP_044531333
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All DBs
Position
1:8399295..8564252
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AA seq
646 aa
AA seq
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MAEAEKDVSVEESTDESEEEESEEEPKLRYERLSNGVTEILQKDAASCMTVHEKFLALGT
HYGKVYLLDVQGNITQKFDIVQVFGLYSGEEFHETFDCPIKIIAVHPQFVRSHCKQFVTG
GKKLVLFERSWMSRWKSSVLHEGEGNIRNVKWRGNLIAWANNMGVKILDIISKQRITNVP
RDDISLRPDMYPCSLCWKDNVTLIIGWGSSVKICSVKERHASEIRDLPNRYVEIVSQFDM
EFYISGLAPLCDQLVVLSYVKETSDKMEREYCARPRLDIIQPLPETCEEISSDALTVRGF
QENECRDYHLEYSEGESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALLAAEISQR
NIKRHKILDIGLAYISHLVEKGEHDMAARKCQKVLGKNAALWEYEVYKFKEIGQLKAISP
YLPRGDPVLKPLIYEMILHEFLESDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDPHN
TTLLRTLAELYTYDKSYGQALQIYLTLRHKDVFQLIHKHDLFSAIQDKIVLLMDFDSEKA
VDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRFHEKQISLYAEYDRPN
LLPFLRDSTHCPLEKSATNTALDWLASTLSDCRFSDSLVGSSHRAY
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcggagaaggatgtatctgtggaagagtctacagatgagtctgaggaagaa
gaaagtgaagaagagcccaaactgcgatatgaaaggctttccaatggggtgactgaaatt
ctacagaaagatgccgccagttgcatgacggtacatgagaagtttctggcgctgggcacg
cactacggcaaggtctatttgctcgacgtccaaggaaatatcactcagaagttcgacatc
gtgcaggtgtttggactgtactctggagaggaatttcatgagacctttgactgtcccatc
aaaatcatcgcggttcacccccagtttgtgaggtcccactgcaagcagtttgtaactgga
ggaaagaagttggtgttgtttgagagatcttggatgagcagatggaagtcttccgttttg
catgaaggagaaggcaacataagaaacgtaaaatggaggggaaatctaatcgcctgggcc
aataacatgggtgtaaagatccttgacatcatatcaaagcagaggatcaccaacgtgccc
cgagatgacatcagcctccgcccagatatgtacccttgcagcctctgctggaaagataac
gtcaccctcatcattggctggggctcttctgtcaagatctgttcggtgaaggagcggcac
gccagtgaaatacgagacttgcccaaccgctatgttgaaatagtttctcagttcgacatg
gaattctacatcagtgggctcgcgcctctctgcgaccagctcgtggtgctttcctatgtc
aaggagacctcggacaaaatggagagggaatactgtgcccggccaagactggacattatt
cagccccttcccgagacctgtgaagagatctcttcggacgccctcacagtgagaggtttt
caggagaatgagtgtcgagactaccacctggagtattccgaaggcgaatcgctcttttat
atcgtcagtcccagggatgttgttgtggccaaggaacgggaccaagatgaccacatcgac
tggctccttgaaaagaaaaaatatgaagaagctctgctggctgccgaaattagccaaagg
aatattaaaaggcacaagattctggacataggcctggcctacataagtcacctggtggag
aaaggagagcacgacatggcagcccgcaaatgtcagaaagttcttgggaaaaatgcagct
ctctgggaatatgaagtttacaaatttaaagaaattggacagcttaaggcgatcagcccg
tatttgccgaggggggatcccgtcctgaagcctctcatctatgaaatgatcctccacgag
tttttggagagtgactacgagggctttgcgacgctgatccgagagtggcccggggacctc
tacaacaactcggtcatcgtccaggctgtccgggaccacctcaagaaggacccccacaac
acgacgttgctccggacactggccgagctgtacacgtacgacaagagctacggccaggcg
ctgcagatctacctgacgctgcgccacaaggacgtcttccagctcatccacaagcacgat
ctcttcagcgccatccaggataagattgtgctgctcatggacttcgattccgagaaagcc
gtggacatgcttctggacaacgaagacaagatttccataaaaaaagtcgtggaagaactg
gaagacaggcctgagctgcagcatgtgtatttgcacaaacttttcaaaagagatcatcac
aagggccagcgcttccatgagaagcagatcagcctgtatgccgagtacgatcgccccaac
ctgctcccgtttctccgagacagcacccactgccccctggagaagagcgccacgaacacc
gccctggactggctcgcctccaccctgtctgactgccgcttctcggattctttggtggga
tcttcccatcgtgcctattaa
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