KEGG   Gracilinanus agilis (agile gracile opossum): 123246776
Entry
123246776         CDS       T07702                                 
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
gas  Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:gas00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gas03009]
    123246776 (NLE1)
Ribosome biogenesis [BR:gas03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    123246776 (NLE1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd WDR55 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_EML Beta-prop_WDR19_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st NLE Beta-prop_DCAF12 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 WD40_RFWD3 Ge1_WD40 Beta-prop_Nup120_160 eIF2A RMC1_N Beta-prop_SPT8 PD40 Beta-prop_RIG_1st Beta-prop_NWD2_C Cytochrom_D1 FAD_binding_9
Other DBs
NCBI-GeneID: 123246776
NCBI-ProteinID: XP_044531504
LinkDB
Position
4:479471561..479481758
AA seq 485 aa
MAAEATGEGLRGDVQRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLGKEDPLPL
AFYIHDAEIVASLEKTLESQPVETEKVLEIIYQPQAVFRVRAVARCTSSLEGHSEAVISV
AFSPTGKYLASGSGDTTVRFWDLSTETPHFTSRGHRHWVLSIAWSPDGKKLASGCKNGQI
LLWDPNSGQQLGRGLAGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRIWDTSVGRCDR
ILTGHTQSVTCVRWGGDGLLYSASQDRTIKVWRPHDGVLCRTLQGHAHWVNTMALSTDYV
LRTGAFEPAEASINAQDVRGSLQELKQRALGRYNQIRGLGPERLVSGSDDFTLFLWSPAE
DKKPLQRMTGHQALINEVLFSPDARIIASASFDKSVKLWDGKTGKYLASLRGHVAAVYQI
AWSADSRLLVSGSSDSTLKVWDVKTRKLAVDLPGHADEVFAVDWSPDGQRVASGGKDKCL
RIWRR
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggcggcggaagctacaggcgagggcctgcgtggggatgtgcagcggctgctggtccag
tttcaagatgagggcgggcagctgctgggctcgcccttcgacgtgcccgtggacattacc
ccggacaagctccagctcgtctgtaatgcgctgctgggcaaggaagatccactccccttg
gccttttacatccacgatgcggaaatcgtcgcttctctggagaagacgctggagtcgcag
ccggtggaaactgagaaggtccttgagatcatttaccagccgcaggcggtgttccgggtg
cgagccgtggcccgctgcaccagctccctggagggccactccgaggccgtcatctctgtg
gccttcagccccaccggaaagtacctggccagcggctccggggacaccaccgtgcgcttc
tgggacctctccacggagacgccgcacttcacgtccagaggtcacagacactgggtcctc
agcattgcctggtccccggatggcaagaagctggcctcgggctgtaagaacggccagatt
ctcctgtgggacccaaacagcgggcagcagctgggcaggggcctcgccggacacagcaag
tggatcacagggctgagctgggagcccctacacatgaaccccgagtgccgctacgtggcc
agcagctccaaggacggcagcgtccggatctgggacacgtcggtgggccgctgcgaccgc
atcctcactggacacactcagtccgtcacctgcgtcagatggggaggggacggcctgctc
tactcggcctcccaggaccggaccatcaaagtgtggaggccccacgacggggtgctctgc
aggaccctccagggccacgctcactgggtgaacaccatggccctcagcaccgattacgtc
ctccgaacgggggccttcgagccggcggaggcctccatcaatgcccaggatgtccggggc
tccctgcaggagctgaagcagagagcgctgggccggtacaaccagattagggggttgggg
ccagagaggctggtctcgggatctgatgacttcacgctgttcctgtggtcgcccgcagag
gacaagaagcccctccagcggatgacgggacatcaggccctcatcaacgaggtgctcttc
tccccggatgctcggatcatcgccagcgcctcctttgacaagtcggtcaaattgtgggac
ggcaagacgggcaagtacctggcctccctccgaggccacgtggcagccgtgtaccagatc
gcctggtccgcagacagccggctcctggtgagcgggagcagcgacagcaccctcaaggtg
tgggatgtgaagactcggaagctggccgtagacctccctggtcatgctgatgaggtgttt
gctgtagactggagtcctgatggtcagcgggtagcaagcggtgggaaggacaaatgtctc
cgcatatggaggaggtga

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