Gracilinanus agilis (agile gracile opossum): 123246979
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Entry
123246979 CDS
T07702
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gas03000
]
123246979 (SOX13)
Transcription factors [BR:
gas03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123246979 (SOX13)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
123246979
NCBI-ProteinID:
XP_044531697
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Position
4:106731604..106809609
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AA seq
618 aa
AA seq
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MSMRSPISPQLALDGIGTMVNCTVKAEEKKEICQEAPPGQQQVPASAAEPLTGDPARAPQ
DGADSSGPPQDCGSPRSDGHPEPRRSGSEPATGSQEKLDFNRNLKEVMPTIEKLLSSDWR
ERLLGRSTVETKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQ
QQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPMPVTPD
SQLALPIQPIPCKPVEYPLQLLHSPPTPAVKRPGAVSAHHPLQESSQPLNLTAKPKGPEL
PNTSSSPNLKISTCGPLPSNHGAPTRDLQASPPSLPLGFLGEGDAITKAIQDARQLLHGH
SGPIESSPNASYRKDLINLESSPAKDRLEESCGHQLDETMLSCDMDGSRHFPESRNNNHI
KRPMNAFMVWAKDERRKILQACPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH
LEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQNYVIPPPGNQMQMSSPDV
LYPRAPGMPLAQPLLEHYVPRSLDPSMPIIVNTRSLKEENEGAEDGHSVADGEMFRYSEE
EDSEVEEKSDGELVVLTD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccatctctccccagctggcactcgatggcattgggaccatggtg
aactgcactgtcaaggcagaagaaaagaaagagatatgccaggaggctccacctggccag
cagcaggtgccagcctctgctgcagaacccttgaccggagacccagcccgggccccccag
gatggagctgactcaagtggcccaccccaggactgtgggtccccgaggagcgacggacac
ccagaacctaggaggtcggggtctgagccagccactgggagccaagaaaagctggatttc
aacaggaatttgaaagaagttatgcccaccattgagaagcttctgtccagtgactggaga
gagaggcttctgggaagaagcactgtggaaaccaaagatgttaaagggacccaagaaagc
ctggcagaaaaggaacttcaactcctggttatgatccatcaactgtccactctgcgggac
cagctcctgacagcccactcggagcagaagaatatggcggccatgctgtttgagaagcag
cagcaacagatggaactagccaggcagcagcaagagcagatagcaaagcagcagcagcag
ctcatccagcaacagcacaagattaacctcctacagcagcagatacagcaggtcaacatg
ccttatgtcatgatccctgcgttccctcccagccaccagcccatgcctgtcacccctgac
tcccagctggcactacctattcagcccattccttgtaaaccagtggagtacccgctgcag
ctgctgcacagcccccctacccctgctgtgaagaggcctggggctgtctctgcccaccac
ccgctccaggagtcttcacagcctctgaacttgacagccaagcccaaaggtccggagctg
cccaacacttccagctcccccaacctgaagataagcacctgtggtcccctcccctccaat
catggggctcctacccgggacctccaagccagcccgcccagcctgcctctaggcttcctg
ggtgagggggatgccatcaccaaagctatccaggatgcccggcagctgctgcatggccac
agtggacccattgagagttctcctaatgcctcttacaggaaggacctcatcaacctggag
tcatccccagccaaggatcggctggaagagagctgtgggcaccagctagatgagaccatg
ctgagctgtgacatggatggctcccgacacttccccgagtcccggaacaacaatcacatt
aagagacccatgaatgccttcatggtgtgggccaaggatgaacggcggaagatcctccag
gcctgtcccgacatgcataactccagtatcagcaagattcttggctcccgctggaagtcc
atgacaaaccaggagaagcaaccctactacgaggaacaggcacggctgagccggcagcac
ctggagaagtatcccgactacaaatataagcctcggcccaaacgcacgtgcatcgtggag
ggcaagcgactacgagtgggagagtacaaggccctgatgagaaaccggcgccaggatgcg
aggcagaattacgtgatccccccaccaggcaatcagatgcagatgagttcccccgatgtc
ctgtaccccagggcacccggaatgcccctggcacagccccttctggagcactatgtgccc
cggagcctggaccccagcatgcctatcattgtcaacacccgaagccttaaggaggagaat
gagggagctgaggatgggcactccgtagctgacggggagatgttccggtacagcgaagaa
gaagattcagaagtcgaggagaagagtgatggagagttggtagtgctcacagactga
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