Gracilinanus agilis (agile gracile opossum): 123247233
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Entry
123247233 CDS
T07702
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04142
Lysosome
gas04144
Endocytosis
gas04721
Synaptic vesicle cycle
gas04961
Endocrine and other factor-regulated calcium reabsorption
gas05016
Huntington disease
gas05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123247233 (CLTC)
04142 Lysosome
123247233 (CLTC)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
123247233 (CLTC)
09156 Nervous system
04721 Synaptic vesicle cycle
123247233 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
123247233 (CLTC)
09164 Neurodegenerative disease
05016 Huntington disease
123247233 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123247233 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gas04147
]
123247233 (CLTC)
Membrane trafficking [BR:
gas04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
123247233 (CLTC)
Exosome [BR:
gas04147
]
Exosomal proteins
Proteins found in most exosomes
123247233 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
123247233
NCBI-ProteinID:
XP_044531980
LinkDB
All DBs
Position
4:complement(175739606..175816768)
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLSKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcctatccgtttccaggagcatctccagctccagaatctgggtatc
aacccagcaaatattggcttcagtactttgactatggagtcggacaaattcatctgcatt
agagaaaaagtaggagagcaagcccaggtggtaatcattgatatgaatgatccaagtaat
cccattcgtcgaccaatttcagctgacagcgccatcatgaatccagctagcaaagtgatt
gcattaaaagctgggaaaacacttcagatatttaacattgaaatgaaaagtaaaatgaag
gctcacaccatgactgatgatgtcaccttttggaaatggatctctttgaacactgttgcc
cttgttacggacaatgcagtctatcattggagtatggaaggagaatctcaaccagtgaag
atgtttgatcgccattctagtcttgctggttgccagattatcaactatcgtacagatgca
aagcagaagtggttacttcttactggcatatctgcacagcaaaatcgtgtggtgggagcc
atgcaactttattctgtagacagaaaagtgtctcagcccattgaaggacatgctgctagc
tttgcacaatttaagatggaaggaaatgctgaagagtcaacactattttgctttgctgta
agagggcaagctggaggcaagttacatatcattgaagttggcacaccacctacagggaat
cagccttttccaaagaaagcagtagatgtcttctttcctccagaagcacaaaatgacttt
cctgtggcaatgcagatcagtgaaaaacatgacgtggtgttcttgattaccaaatatggc
tatatccatttatatgacctggagactggcacctgcatctacatgaatagaatcagtgga
gaaaccatcttcgttactgcacctcatgaagcaacagctggaattattggtgtaaacaga
aagggacaagtgttgtcagtgtgtgtggaagaagagaatataattccttacatcaccaat
gtcctacaaaatcctgacctggctttgagaatggctgtgcgcaataacttagctggagct
gaagagctttttgcccggaaatttaatgctctctttgcccaaggaaattactcagaggca
gcaaaagtggctgctaatgcaccaaagggaattttacgtactccagacaccatccgccga
ttccagagtgttccagcacaacctggccagacatcacctctacttcagtactttggaatc
cttttagaccaaggccagctgaacaaatatgaatccttagaactgtgtaggcctgtgctt
caacagggacgtaaacagctgctagagaaatggttaaaagaagataagctggagtgttca
gaagaattgggtgatctagtaaagtctgtagacccaaccttggcacttagtgtgtacctg
agggctaatgttccaaataaagttatccagtgctttgcagaaacaggccaagtacagaag
attgtactgtatgccaagaaagttggttatactccagactggatctttctgttgagaaat
gtaatgaggatcagcccagatcaaggtcaacagtttgctcaaatgttggttcaagatgaa
gaaccacttgctgatataacacagattgttgacgtatttatggaatacaacttaatccag
cagtgcactgcatttttactagatgccctgaagaataatcgcccatctgagggccccttg
caaacacggttgcttgagatgaaccttatgcatgcccctcaagttgcagatgctatttta
ggaaaccagatgttcacacattatgaccgggctcatatcgctcaactctgtgaaaaggct
ggcctgttacagcgtgcactggagcacttcactgatctgtatgatattaagcgtgcagtt
gttcacacccatcttctgaaccctgagtggttagtcaattactttggctccttatccgtg
gaagattccttggagtgtctcagggctatgctttctgccaatattcgccaaaacctacaa
atttgtgtccaggtggcttccaaatatcatgaacaactctcaactcagtccctgattgaa
ctatttgaatcttttaagagttttgaaggacttttttatttcctgggatccattgtcaac
ttcagtcaggacccagatgtgcactttaaatatattcaggcagcctgtaagactggacag
atcaaagaggtagagagaatctgccgagagagcaactgctacgatccagagagagtcaag
aactttctcaaagaagcaaaactaacagaccagttaccactcatcattgtttgtgatcga
tttgactttgttcatgacttggtgctctacttatatagaaataatctccagaaatatatt
gagatctacgtgcagaaggtgaatccaagtcgtcttccagtagttattggaggattgctt
gatgttgattgctctgaagatgtcataaagaatttgattcttgtagtgagaggtcagttt
tctactgatgaacttgttgctgaagttgaaaagagaaacagattaaaacttctactgcct
tggctagaagccagaattcatgagggttgtgaggagcctgctactcacaatgcactagct
aaaatctacattgacagtaacaacaacccagaaagatttcttcgtgaaaatccttattat
gacagtcgtgtcgttgggaaatattgtgagaagagggatccccacttagcatgtgtggct
tatgaacgtggccagtgtgatttggaacttattaacgtttgcaatgaaaattctctcttc
aaaagtctttcccgctatttggttcgccgtaaggatccagagctttggggtagtgtactc
ctagagagcaatccttataggaggcccctgattgaccaggttgtacagacagctttgtct
gagactcaagatcctgaagaggtgtctgttactgtcaaagctttcatgactgcagacctt
cccaatgaactcattgaactattggagaaaattgttcttgacaactcagtattcagtgaa
cacaggaatctgcaaaacctccttatcctcactgcaattaaagccgaccgtactcgtgtt
atggaatatatcaatcgactagataattatgatgctccagatattgctaatattgccatc
agcaatgagttgtttgaggaggcatttgccattttcaggaaatttgatgttaatacttca
gctgtacaggtcttgattgaacacattggaaacctggatcgtgcatatgaatttgctgaa
cgctgcaatgaacctgcagtatggagtcagcttgcaaaggctcagttgcagaaagggatg
gtgaaagaagctattgattcctatatcaaagcagatgacccttcatcttacatggaagtt
gttcaggctgccaatactagtggcaactgggaagaactggttaagtacctgcaaatggct
cgcaagaaggctcgtgaatcttatgtagagacagaactgatctttgctctagctaaaacc
aatcgccttgcggagctggaagaatttattaatgggccaaataatgcccatattcaacaa
gttggggaccgttgttatgatgagaaaatgtatgatgctgctaaattgttatacaataac
gtttccaacttcggtcgcttggcatctaccctcgttcacttgggtgaatatcaggcagct
gttgatggggcccggaaagctaacagcactagaacgtggaaggaggtctgctttgcctgt
gtagatgggaaagagttccgcttggctcagatgtgtgggcttcatattgtggtgcatgcg
gatgagctggaggagctcataaactactaccaggatcgaggatattttgaagaactgatc
accatgttggaagcagcactggggcttgagcgagcccacatgggaatgtttactgaatta
gcaattctttactcaaaattcaaaccacagaaaatgagggagcatttggagttgttctgg
tccagagtgaatattccaaaggtgctaagggctgcagagcaagcacatctttgggcagag
ctggtatttttatatgataaatatgaagaatatgacaatgccataattactatgatgaat
catccaacagatgcctggaaagaaggacaatttaaagatattattaccaaggtagccaat
gtggaactatattatagagcaatacaattctatttagaattcaaacctctgctactaaac
gacctgctgatggtactgtctccaaggttggatcacactcgtgctgtcaactatttcagt
aaggttaaacaacttccattggttaaaccatacctacgctctgttcaaaaccataacaac
aagtcggtgaatgagtcattgaataacctcttcattacagaagaagattaccaggcacta
agaacatcaatagatgcatatgacaatttcgataatatctctcttgctcaacgtttggag
aaacatgagcttattgaatttagaagaattgctgcatatctcttcaaaggcaacaatcgc
tggaaacagagtgtagagctatgcaaaaaagaccggctttataaggatgcaatgcagtat
gcctctgaatcaaaagatacagagttggcagaagagctgctgcagtggtttttgcaggaa
gaaaagagagaatgctttggagcttgtctcttcacttgttatgatctcttaaggccagat
gttgtcttggaaactgcatggaggcacaatatcatggactttgccatgccctattttatc
caggtcatgaaggaatacttgtccaaggtggataaactggatgcttcagaatccctgaga
aaagaagaggagcaggctacagaaacgcaacctatcgtttatggtcaaccacagttgatg
ttgacagcaggacccagcgtggcagttcctccccaagcaccttttggctatggctatact
gcgcccccctatgggcagccacaacctggctttgggtacagcatgtga
DBGET
integrated database retrieval system
