Gracilinanus agilis (agile gracile opossum): 123247359
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Entry
123247359 CDS
T07702
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04136
Autophagy - other
gas04140
Autophagy - animal
gas05010
Alzheimer disease
gas05014
Amyotrophic lateral sclerosis
gas05016
Huntington disease
gas05017
Spinocerebellar ataxia
gas05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123247359 (WIPI1)
04136 Autophagy - other
123247359 (WIPI1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
123247359 (WIPI1)
05014 Amyotrophic lateral sclerosis
123247359 (WIPI1)
05016 Huntington disease
123247359 (WIPI1)
05017 Spinocerebellar ataxia
123247359 (WIPI1)
05022 Pathways of neurodegeneration - multiple diseases
123247359 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123247359 (WIPI1)
03029 Mitochondrial biogenesis [BR:
gas03029
]
123247359 (WIPI1)
Membrane trafficking [BR:
gas04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
123247359 (WIPI1)
Mitochondrial biogenesis [BR:
gas03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123247359 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_NWD2_C
ANAPC4_WD40
CNH
Beta-prop_WDR90_POC16_2nd
DUF5711
WDR55
EIF3I
Beta-prop_Vps41
Beta-prop_IFT140_1st
BCAS3_WD40
Beta-prop_WDR35_TULP_N
MrkDrd
Motif
Other DBs
NCBI-GeneID:
123247359
NCBI-ProteinID:
XP_044532165
LinkDB
All DBs
Position
4:220157874..220205004
Genome browser
AA seq
449 aa
AA seq
DB search
MEAEAAEAPLGGAEAEAGLSCFSFNQDRTSLAIGTKNGYRLFSLSSVEQLDQVHESSEIP
DVYIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLE
ESIYIHNIKDMKLLKTILDIPVNPTGLCALSINHSNSYIAYPGSLTTGEIVLYDGNTLKT
ICTIPAHDGPLAAITFNSVGSKLASASEKGTVIRVFSTPEGQKLYEFRRGMKRYVTINSL
VFSMDSQFLCASSNTETVHIFKLDNLTSSGPEEPSTWSSYMGKMFMAATNYLPSQVSDMM
NQDRAFATVRLNFSGQKNICTLSTIQKLPRLLVISSDGRLYIYNLDPQDGGECILIKTHS
LLGSGKTEENKENDLRPSLPQSYAATVARPGTTSLSSTVPGYSEDGGALRGEVIPEHEFA
TGPVCLDDENEFPPIILCRGSQKGKTKQS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggaggcggccgaagcccccctgggtggggcggaggccgaggccgggctcagc
tgtttctccttcaaccaggaccgcacatccctagcaatcggaaccaaaaatgggtatagg
ttgttttccttaagttctgtggaacaactggaccaagtccatgaaagcagtgaaatacca
gatgtctacattgtagagcgcctgttctctagtagcttggttgtggtggttagtcacaca
aaaccacggcagatgaatgtatatcatttcaagaaagggacagaaatctgtaactacagc
tattctagcaacatcctatccataaggctgaaccgacagaggttgctggtgtgcctagag
gaatccatttatattcacaacattaaagatatgaagctattgaagactatcctggatata
cctgtaaacccaacaggtttatgtgccctatctattaaccattccaattcttacattgcc
taccctggaagcttaactactggggagattgtactttatgatggaaatacgttgaaaaca
atttgcacaattcctgcccatgacggtccacttgctgccatcacctttaactctgtggga
tccaaactagccagtgcttctgagaaaggcacagtcatccgggtgttttccacccctgaa
ggacaaaagctctatgagtttaggagaggaatgaagaggtatgtgactatcaactctcta
gttttcagcatggactcacagttcctctgtgcatccagcaacacagaaacagtgcacatc
ttcaaactggacaaccttacctccagtgggccagaagagccttcaacttggagtagctat
atggggaagatgttcatggctgctaccaactacctcccttctcaagtatcagatatgatg
aaccaggacagagcttttgccactgtgcgtttgaatttctctggtcagaagaacatctgt
accctttctactattcagaaattgccccggctgttagttatatcatctgatggacggctt
tacatctataatttggaccctcaagatggaggagagtgtatcttaatcaagacccacagc
ttgcttggctcaggaaagacagaagagaataaagaaaatgacctcagaccttcattacct
cagtcttatgcagcaacagtagccagaccaggcacaacgtctttgtcctcaacagtgcca
ggttattctgaggatggtggggcgcttcgaggagaggttatccctgaacatgaatttgca
acgggaccagtgtgtcttgatgatgagaatgagtttcctcctataatcttgtgccgtgga
agtcagaagggcaaaacgaagcagtcatga
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