Gracilinanus agilis (agile gracile opossum): 123247444
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Entry
123247444 CDS
T07702
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03030
DNA replication
gas03420
Nucleotide excision repair
gas03430
Mismatch repair
gas03440
Homologous recombination
gas03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123247444 (RPA1)
03420 Nucleotide excision repair
123247444 (RPA1)
03430 Mismatch repair
123247444 (RPA1)
03440 Homologous recombination
123247444 (RPA1)
03460 Fanconi anemia pathway
123247444 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gas03000
]
123247444 (RPA1)
03032 DNA replication proteins [BR:
gas03032
]
123247444 (RPA1)
03400 DNA repair and recombination proteins [BR:
gas03400
]
123247444 (RPA1)
Transcription factors [BR:
gas03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123247444 (RPA1)
DNA replication proteins [BR:
gas03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123247444 (RPA1)
DNA repair and recombination proteins [BR:
gas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123247444 (RPA1)
MMR (mismatch excision repair)
123247444 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
123247444 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
IBR
Motif
Other DBs
NCBI-GeneID:
123247444
NCBI-ProteinID:
XP_044532272
LinkDB
All DBs
Position
4:490550481..490625386
Genome browser
AA seq
617 aa
AA seq
DB search
MSGRLSEGAIGLIMQQGDTTIKPILQVINIRPIATGNSPPRYRMLMSDGLNTVSSFMLAT
QLNVLVEEERLSSNCICQVNRFIVNTLKFGRKVVILMDLEVLQSADEVGGKIGNPVPYNE
GQGQQQAVPAPGPATNPVATKPQQQNGSSGLGSTATKSFGVSKTFGKVGNANLSTPGGSQ
LKVVPIASLNPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIEMVDESGEIRATAFNDQ
VDKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVVLCEDAHHLPTVQFD
FTVIGDLENKAKDSLVDIIGVCKSYEDASKVVVKSSNREVSKRNIHLMDTSGKVVTTTLW
GEDADRFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTILVNPDIPEAFKLRGWFDSEGQA
LEVVSISDARGGGTGGSNTNWKTLYEVKSENLGQGDKADYFSCVGTVVYLRKENCMYQAC
PSQDCNKKVIDQQNGLYRCEKCDREFPSFKYRMILSVNIADFQENQWVTCFQESAEAILG
QNTAYLGELKDKNEQAFEEVFQNANFRSYTFRIRVKLETYNDESRIKASVVDVKPVDYRE
YGKRLIMNIRKHAARQM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcgcctgagcgagggggccatcgggctcataatgcagcaaggggatactact
ataaaacccatactccaagtcattaacatccgaccgattgctacaggaaattctccaccc
cgttatcgaatgctcatgagtgatggattgaatactgtatcctcttttatgttggcaact
cagctaaatgtactggtggaggaagaacgcttgtccagcaactgcatttgccaggttaac
cggttcattgttaatactctgaaatttggaaggaaagtggttatattgatggatttagaa
gttttgcaatctgctgatgaagttggaggaaagattggcaatccggtgccctataatgaa
ggacaagggcagcagcaagcagtgccagctccagggccagcaactaatccagtagccacc
aaaccccagcaacagaatgggagttcaggcctgggttctactgcaaccaagagctttggt
gtttccaagacatttggtaaagttgggaatgctaacctgagcactcccggaggatcccag
ctgaaagtcgtacccatcgccagcctcaatccctaccagtccaagtggactatttgtgct
cgtgttactaataaaagtcagatccgcacctggagcaactcccgaggggaaggaaaactt
ttctctatagaaatggttgatgaaagtggtgagatcagagctactgcttttaatgaccag
gtggacaaattctttcccctcatcgatgtgaataaggtgtattacttctccaaaggcacc
ctgaagattgctaataagcaattcacagctgtgaagaatgactacgagatgaccttcaat
aatgagacttctgttgtgctttgtgaagacgctcatcacttacctacagttcagtttgac
ttcacagtgatcggtgatctggagaacaaagccaaagactcacttgtagacatcatcggg
gtctgtaagagctacgaagatgccagcaaagtcgttgtgaagtcttccaacagggaagtg
tccaagaggaatatccatttgatggacacgtcagggaaggtggtgacaacaactctgtgg
ggagaagatgctgacagatttgatggctctcgccagcctgtgctggccatcaaaggagcc
cgagtctctgattttggtgggcggagcctctccgtcctctcttcaagcacaatccttgtg
aaccctgatattccagaggcctttaagctgcgtggatggtttgactctgaaggacaagcc
ttagaagttgtttccatctctgatgccaggggtggaggaacgggagggagtaataccaat
tggaaaactttgtatgaagttaaatctgagaacctgggacaaggtgacaaggcggattac
ttcagttgtgtgggaacagtggtgtaccttcgcaaggagaactgcatgtaccaggcttgt
ccctctcaagattgcaataagaaagtgattgaccagcagaacgggctctaccgatgcgag
aaatgtgatcgtgaatttcccagtttcaagtaccggatgatcctgtcggtcaatattgca
gatttccaggagaatcagtgggtgacttgtttccaggaatctgcagaagctatccttggg
cagaacacagcgtatcttggggaattaaaagacaagaatgagcaggcgtttgaggaagtc
ttccagaatgccaactttcgttcctacacattcaggatcagagtcaaactggagacttac
aatgacgagtctcgcatcaaggcctccgtggtggatgtgaagcctgtagactaccgagaa
tacggcaagaggctcatcatgaatattaggaaacatgctgctcggcaaatgtga
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