KEGG   Gracilinanus agilis (agile gracile opossum): 123247572
Entry
123247572         CDS       T07702                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
gas  Gracilinanus agilis (agile gracile opossum)
Pathway
gas03020  RNA polymerase
gas03420  Nucleotide excision repair
gas04623  Cytosolic DNA-sensing pathway
gas05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:gas00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123247572
  09124 Replication and repair
   03420 Nucleotide excision repair
    123247572
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    123247572
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    123247572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gas03021]
    123247572
   03400 DNA repair and recombination proteins [BR:gas03400]
    123247572
Transcription machinery [BR:gas03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     123247572
  RNA polymerase III system
   RNA polymerase III
     123247572
  RNA polymerase I system
   RNA polymerase I
     123247572
DNA repair and recombination proteins [BR:gas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123247572
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 123247572
NCBI-ProteinID: XP_044532433
LinkDB
Position
4:complement(508912787..508918969)
AA seq 114 aa
MDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKV
YRIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLHGFEVDSRVYLLMKKLAF
NT seq 345 nt   +upstreamnt  +downstreamnt
atggacctcatcttagatgttaacatccagatatatcccgtggacttgggtgacaagttc
cggctggtgatagcgagcaccttgtatgaagatgggaccctggacgatggggaatataac
cccacggacgaccggccctccagggctgaccagtttgagtatgtgatgtatgggaaagtg
tacagaattgagggggatgagacctccacagaagcagccactcgcctctctgcctatgtg
tcttatgggggcctgctcatgagactccaaggggacgccaacaacttgcatggctttgaa
gtggactccagagtgtacctcctgatgaagaagctggccttctga

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