Gracilinanus agilis (agile gracile opossum): 123247682
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Entry
123247682 CDS
T07702
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123247682 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gas03041
]
123247682 (DHX8)
Enzymes [BR:
gas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123247682 (DHX8)
Spliceosome [BR:
gas03041
]
Complex C
Other components
Step II factors
123247682 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
nSTAND_NTPase5
AAA_16
PhoH
Sigma54_activ_2
TsaE
ABC_tran
Cas3-like_C_2
Transformer
Motif
Other DBs
NCBI-GeneID:
123247682
NCBI-ProteinID:
XP_044532587
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All DBs
Position
4:complement(188432149..188462399)
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AA seq
1117 aa
AA seq
DB search
MRPPAKPSAVKDPVVKPKTEKEKLKELFPALCRPDNPTVRTMLDEDDVKVAVDVLKELEA
LMPSAAAHEKQRSSEHRDRAKKKKRSRSRSRDRDHKRRHRSRSRSRSRTRDRNKGKSRYR
SRSRSQSPIKDRKDRDKYGEKNNDRWRDKHVDRPPPEEPSIGEIYNGKVTSIMQFGCFVQ
LEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQDTG
EDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDTLERKRLTRISDPEKWEIK
QMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIK
IVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDVDGRQIAA
NMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFKLKEQLVQAVHDNQI
LIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVG
YTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK
TVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLIT
VMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTR
IFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQ
AKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSF
DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSE
EMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCY
ENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEG
YRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKV
SDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcgacccccagcaaagccttctgctgtcaaagatccagttgttaaaccaaagacagaa
aaggaaaagctcaaggaactgttcccagcactttgccgaccagacaatcctacagtccgg
accatgcttgatgaagatgatgtcaaagtagctgtggatgtcctcaaggagctggaagct
ctaatgcccagtgctgcagcacatgagaagcagagaagctctgaacaccgcgacagggca
aagaagaagaaacggagtcggagtcgaagccgagacagagaccacaaacgaagacatagg
tccagatcaaggtcacgttctaggactcgggataggaataaagggaaatccagataccga
tctaggagcagaagtcaaagtcctatcaaagaccggaaagaccgtgataaatatggggag
aagaacaatgacagatggcgagataaacatgtggaccgccccccacctgaagagccttcc
attggggaaatttacaatggcaaagttaccagtatcatgcagtttgggtgtttcgtgcaa
ctggaaggactaaggaaacggtgggaaggtttagttcacatttctgagcttcgccgggaa
ggccgagtggccaatgttgctgatgttgtgagcaaaggccagagagttaaggtgaaagtc
ctgtctttcactgggactaaaaccagcctgagcatgaaggatgtggatcaggatactgga
gaagatctgaatccaaatcgacgcaggaaccttgttggggaaaccaatgaggaaacctct
atgaggaaccctgatagacccactcacctctcccttgttagtgccccagaagtagaagat
gacacacttgaacggaaacgtctcacccggatctcagatcctgagaaatgggagatcaaa
cagatgattgcagccaatgtactttccaaagaagagtttccagactttgatgaagagaca
ggaatccttcctaaagtggatgatgaagaagatgaggacctagagattgaattggttgag
gaagaacctccattcttgagaggacacaccaaacaaagcatggacatgagccccattaaa
attgttaagaatcctgatggctccttgtcgcaagcagcaatgatgcagagtgctttggcc
aaagaaagaagagaactcaaacaggcccagcgtgaagcagagatggactccattcctatg
ggactcaacaaacactgggtggatcctctacctgatgtggatgggaggcagattgctgcc
aacatgcgaggcattgggatgatgcctaatgacatacctgagtggaagaagcatgctttt
gggggcaacaaagcatcttatggtaaaaagacccagctgtcaatcattgaacagagggaa
agtctccccattttcaaactcaaagagcagcttgttcaggctgttcatgacaatcagatc
ctgattgttattggagagactggttctgggaagacaacacagatcacacagtaccttgct
gaggcaggttacacctccagggggaaaattggatgtacacaacctcgaagagtggcagca
atgtcagtggccaaaagagtatcagaggagtttggttgttgcttaggccaagaggtgggc
tatactattcgctttgaagactgtaccagcccggaaacagtcattaaatacatgacagat
gggatgttgctacgggagtgtttgattgaccctgaccttacgcagtatgcaatcatcatg
ttggatgaagctcacgagagaacaattcatacagatgttctctttggattgttgaaaaag
acagtgcaaaaacggcaagacatgaagctaattgttacctcagccacattagatgctgtg
aaattttcccagtatttctatgaggctcccattttcaccattccaggccgaacatatcca
gtagaaattctctacactaaagaacccgagacagattacttggatgccagcctgattaca
gtcatgcagatccatttaactgaacctccaggtgacatcctggtgtttctgactggtcag
gaagaaattgatactgcttgtgagatcttatatgaacgcatgaagtctctgggacctgat
gtgcctgaattaatcatcctccctgtgtattctgctctaccaagtgagatgcaaacccgg
atctttgacccagctcctcctggtagcaggaaggttgtaattgctaccaacattgctgag
acttctctgacaattgatgggatctactatgtggtggaccccgggtttgtgaagcagaaa
gtatacaactccaagactgggatcgaccagctggtggtgactcccatctctcaggctcag
gcaaagcagagggctggcagagctgggagaacagggcctggaaagtgttataggctctac
acagaacgtgcctaccgagatgaaatgctgaccaccaacgtgcctgagatccagagaact
aatttagccagcacggtgctctctctcaaggccatgggcatcaatgacctgctttccttt
gacttcatggatgcccccccaatggagactctgatcacagccatggagcagttgtacaca
ttaggagccctggacgatgagggcctgctcacccgtctgggccgaaggatggcagagttt
cccctggagccaatgttgtgcaagatgctgatcatgtctgtgcatctaggttgcagtgaa
gagatgctcaccattgtgtccatgctgtcagtgcagaatgtcttctacaggcccaaggat
aaacaagcccttgcagatcagaaaaaagccaaattccaccagactgaaggggaccacctc
actctcttggctgtgtacaattcttggaagaacaacaaattctccaacccctggtgttat
gagaatttcatacaggctcgttccttgcgccgagcccaggatatccgtaaacagatgttg
ggcatcatggatagacataagctggatgtggtgtcctgtggcaaggctacagtccgtgtg
cagaaagccatctgcagtggtttcttccgaaatgctgccaagaaggacccacaagagggc
tatcgtactttgattgaccagcaggtggtctatattcatccctccagtgctctcttcaac
agacagccggaatgggtggtgtaccatgagctagttctgactaccaaggagtacatgcgg
gaggttaccaccattgacccccggtggctggtagagtttgccccagccttcttcaaggta
tcagaccccacaaagctcagcaagcagaagaagcagcagcggcttgagcccctgtacaac
cgctatgaggagccaaatgcttggaggatctcccgggctttccggcggcggtga
DBGET
integrated database retrieval system
