Gracilinanus agilis (agile gracile opossum): 123247808
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Entry
123247808 CDS
T07702
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123247808 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123247808 (SMG5)
03032 DNA replication proteins [BR:
gas03032
]
123247808 (SMG5)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123247808 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
123247808 (SMG5)
DNA replication proteins [BR:
gas03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
123247808 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
123247808
NCBI-ProteinID:
XP_044532774
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All DBs
Position
4:166669621..166702034
Genome browser
AA seq
1016 aa
AA seq
DB search
MSQGPPAAESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIG
FYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGD
LSRYQNELAGVDTEQLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQ
SEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVSFMYLQSLLQP
KSSTLDSELTSLCQSVLEDFNLCLFYLPSSPNLSLASEDEEEYENGYSFLPDLLIFRMVI
ICLMSVHSLKRAGSKQYSAAIAFTLAFFSHLINHVNIRLQAELEEGENPVPAFQSDGTDE
PEPKEPLEKEVEPEPEPPPPAPRVNEAKKSRKFSRLSCLRRRRHHPPKAGDDSDLSEGFD
SDSSHDSTRASEGSDSGSDKSDEGGGTAFDAETDSEMNSQESRSDLEDMEDEEGTRPMAP
DPPRTRPEASDPSNGPLGPNEASIASNLQAMSTQMFQTKRCFRLAPTFSNILLQPSTETR
TTAGNRACINGDLDKPEPASDDGSESEESVSSGRSCHNERSIQEKLRILMAEGLLPAVKV
FLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLPAAGELQEPGLVLCPEVQDLLLGCERP
DLPTSLLLPEDTALRNLPPLRAAHKRFNFELDRPLLSPMEESVVRICCIRSFGHFITRLQ
GSILQFNSEVGIFISIAQAEQDNLLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQL
EGSLQQPKAQSAMSPYLVPDTQALCQHLPIIRQLASSGRFIVIIPRTVIDGLDLLKKEHP
GARDGIRYLEAEFKKGNRYIRCQKELGKSFERHKLKRQDVDAWTLYKILDSCKQLTLAQG
IGEDDPSGMVTIVTGLQMDNPSAFSSSMQAAIQAATHASVEIKNVLDFYKQWKEIG
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggcccccccgcagcggagagcagtgagcccgaggccaaggtcctgcatact
aagcggctttaccgggcagtggtggaggctgtgcatcgacttgacctcatcctttgcaac
aaaactgcttaccaagaagtgttcaaaccagagaacattagcctaaggaacaagcttcgt
gaactctgtgtcaagcttatgttcctgcatccagtggattatgggaggaaagcagaggag
ctactgtggaggaaggtgtactatgaggttatccagcttatcaagaccaacaaaaagcac
atccacagccggagcaccttggaatgtgcctacaggacacacctggttgctggtattggc
ttctaccagcatctcctcctctacatccagtcccactaccagcttgaactgcaatgctgc
attgactggactcatgtcaccgaccctctaataggttgcaagaagccagtatctgcctca
gggaaagagatggactgggctcagatggcttgccaccgatgtctggtgtatctgggagat
ttgtcccgatatcagaacgaattagctggtgtggacacagagcaattggctgagagattc
tattatcaagccttgtcagtggctccccagataggtatgcccttcaaccaactgggtacc
ctggcaggcagcaagtattataatgtagaagccatgtactgctatctgaggtgcatccag
tcagaagtgtcctttgaaggggcttacgggaacctcaaacggctgtatgacaaggcagcc
aaaatgtaccaccagctgaagaaatgtgagactcgaaaactgtctcctagcaagaagcgg
tgtaaggacatcaagaggctgctggtgagcttcatgtacctgcagagccttctgcagccc
aagagcagcaccctggactcagagctgacatcactctgccagtcagtcttggaggacttc
aacctttgtctcttctacctgccctcttcacccaacctcagtctggctagtgaagatgag
gaggaatatgaaaatggctattcttttctccctgatcttctcatcttccgaatggtcatc
atttgcctcatgagtgttcacagcttaaagagagcaggatcaaagcagtacagtgctgcc
attgccttcaccctggctttcttctcccatcttatcaaccacgtcaatatccggctacag
gcagaattggaagagggagagaaccctgtgccagcatttcagagtgatgggacagatgag
cctgagcccaaagaaccacttgagaaggaagtagaaccagagccagagcctcctccccca
gcaccaagagtgaatgaggccaagaagagtcgtaaattctcccgcctatcttgccttcgt
cggcgccgacaccatccacccaaggctggtgatgacagtgacctgagcgaaggctttgac
tctgattcaagccacgactcaacccgggccagtgaaggttcagacagtggctcagataag
agtgatgagggtgggggtacagcttttgacgcagagacagactcagagatgaacagccag
gagtcacggtcggacctggaggacatggaagatgaggaaggaacgcggcctatggcccca
gaccctcctcggaccaggccagaagcttctgacccctccaatggccccttgggtccaaat
gaggccagtattgccagtaatctgcaagccatgtccactcagatgttccaaactaaacgc
tgcttccgattggcccctaccttcagtaacatccttcttcagccttctactgaaactcgg
accactgctggtaacagggcctgcatcaatggggacctggacaaacctgaaccagcatct
gatgatggatctgagtcagaggagagtgtatccagtggacgctcctgtcacaatgagagg
agcatccaagagaaacttcggatcctgatggcagagggacttcttcctgctgtaaaagtc
ttcctggattggcttcggaccaacactgacctcatcatcatgtgtgcacagagctcccag
agcctatggaatcgcctctctgtgttactgaatcttttgccagctgctggagaactccag
gagccaggcctggtcctgtgtcctgaggtacaggatctccttctgggctgtgaacgacct
gaccttcccacttccctgctgctcccagaggacacagctctccgaaacctacccccactc
cgagctgcccataaacgctttaattttgaactggatcgacccttgctcagtcccatggag
gagtctgtcgttcgaatctgctgcatccgtagctttggccacttcattacccgtctacaa
gggagcatcctgcagttcaactctgaggttggcatctttatcagcattgctcaggctgag
caagacaatctgttgcagcaagcccaggcccagttcaggatggcccaggaagaagcccga
cggaatcggcttatgagagacatggctcaacttcgactacagcttgaggtgtcccagctg
gagggcagtttgcagcagcccaaggctcagtcggcaatgtccccatatcttgtccctgac
actcaagctctctgccaacacctccccatcatccgccagctggccagcagtggcaggttc
attgtcatcatccctaggacagtgattgatggcttagacttgctaaagaaggaacatcca
ggagccagggatgggatccgatacctggaagcagagtttaaaaagggaaacaggtacatt
cgctgccagaaagagttggggaagagctttgagcggcataaactgaagaggcaggatgta
gacgcctggaccctctataagatcctggacagttgtaaacaactgactctggcccaggga
attggagaggatgaccctagtggcatggtgaccatcgtcactggtcttcagatggataat
cccagtgctttctctagctccatgcaggcagcgatacaagcagccacccatgccagtgtc
gagatcaagaacgtgctggacttctacaagcagtggaaggagattggctga
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