Gracilinanus agilis (agile gracile opossum): 123247835
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Entry
123247835 CDS
T07702
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04382
Cornified envelope formation
gas04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
123247835 (COL7A1)
09158 Development and regeneration
04382 Cornified envelope formation
123247835 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
Pur_ac_phosph_N
VWA_2
Kunitz_BPTI
Ig_DSCAM-DSCAML_C
DUF4992
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
123247835
NCBI-ProteinID:
XP_044532816
LinkDB
All DBs
Position
1:93183823..93233490
Genome browser
AA seq
2893 aa
AA seq
DB search
MKLWFLLTAVVIGTLWLPVKGQAERGRVTCTNLYAADIVFLLDGSSSIGRNNFREVRAFM
EGLVLPFTEVIGASGVRFSVVQYSDDPRTEFGLDTYGSGSDVVQAVRELTYKGGNTRTGA
GFRHIADHIFLPQLARPGVPKVCILITDGKSQDQVEPAAQRLKRQGVKVFAVGIKNADQG
ELRRAASEPPDVFFYFVNDFSILSTLLPLVSRRVCTTTGGTPQILPSEGPHSGPRDLVLS
QATSESLLAEWTAASGPVISYKVQYVPLTGLGQPVPDQRQEVTVPAGETRVRLQGLRPQT
EYQVTVVAQYANSVGDAVSRTAQTAALEGPMISIQNATAHTLLVAWRAVAGASGYRVTWR
SLESGSSQQLDIGRGQTSALLKGLSPDTEYVVTVTPLHGRTPGSSASLTARTEMGIIQNL
QTVILGPTSIHVFWTHIPEAQGYRLEWRRVSGSEPTQTVVLPTEVTSYQVQGLQPGTEYR
LTLYTLYEGREVATPATISQTGKLEPAPGRVSDLRVAEASPSRRSVRVVWSPVPSVSGYR
FVLRNTQDGSEKTQRLPPEQTSFELDRIQPGVSYVVRVSALAGNREGTPGILTVRLDPEP
LPRVPRFRVVASEPGRVQVSWGSVPGASGYRLSWRLRDGHESSRTLTADSTSFDIVGLRP
GASYQVSVSALRGVDQGPPSVITIHTDSPGSVSALRVIHAGSSSVRITWTGVPGATGYRI
SWHSGRGPEQSQLVPGDASTAQLEGLEPNTDYTVRVTAQVGSLEGPAASVAVRTAPEPVG
AVSRLQILDSSSDVVRVTWVGVPGATSYRLVWGRREGGPESSRMLPGDTDSAEIGGLEGG
VSYTVRVTALIGNREGAPVSLTVTTPPASLSVPGSFRLQHSEERVLRLAWDPVPGSGGFR
LRWRPEGGPEQSRVLGPEVSRYDLVGLEPGTLYHVTLSTLGPSGSGESTPVTLSVRTGLP
SLTTDLRTVETSMDSVTLAWTPVPGASSYILSWRPLPGSGYTAPGSQQTLPGSLHSQRVT
GLEPGVSYTFSLTPIQGSSRGPEASLTQHIGCSHGRADVVFLVHATRDNEHHSGVVKSAL
SRLVSALGPLGPDAMQVGLVAYSHRPSPLVPLNGSYDRNSILQRIQGIPYTDPSGNNLGV
AITTAYRYLLGPGSSGRRSHVPGLLVLVVDGPSGDDAISPAREAQAAGLSVLVLGMPGAQ
PEQLRRLVAGVDPAPVFMAVDSARSLEQAVGGLATALCQAASGTQPRPSPCPSQCPKGQK
GEPGATGQKGQVGPPGDPGRSGPPGPQGLPGGGEKGERGFPGVDGRPGSPGNPGSPGLTG
SPGRPGPRGEAGEPGLPGQKGEPGKPGSVTGGGTGLPGKKGEPGVQGDKGERGEPGLPGP
GSGGVGGGDPGLPGLPGNPGPMGPPGLRGEKGDKGKGEDGFPGLPGRQGNPGDRGPRGPP
GEPGSKGDPGQPGSLGEAGEKGDRGFPGPPGLQGEPGLSGRSGAEGPEGPPGPAGRRGEK
GEPGEPGKPGEVAGLDGAGVKGEKGNLGPEGPRGAPGPKGDRGLPGVGVPGDPGPKGELG
DRGAIGLTGRAGPKGEVGASGDKGEPGRPGPPGPMGPRGRDGGTGEKGDEGPVGETGLPG
KPGDRGLRGVPGIRGPPGEKGDQGDPGEDGQNGSPGLTGPKGDRGEPGPPGPPGRLVDSG
PGIPGTGEKGTKGEAGDPGEDGARGPKGDAGPPGSPGERGTEGLRGPPGPRGEPGDRGPA
GEKGERGTPGSDGRNGLDGKPGAVGPPGLRGDTGKTGEPGRDGLPGLRGEHGPPGPAGLP
GVTGKPGDDGKPGLNGKNGEPGDPGEDGRKGDKGEAGSPGRDGRDGSKGERGDVGTPGLQ
GPPGLPGPVGPPGQGFPGVSGSPGPKGDRGEAGARGEQGLPGERGLKGESGSVTNLEQSL
ESLGIKVSTLRQIVREGSEDFYGFPDRFRGQKGEPGERGPMGKEGPVGLTGERGSKGDRG
DTGPQGPPGQALIERGASGPPGQPGEPGKPGIPGLPGRAGELGEAGRPGERGERGEKGDR
GEQGRDGLPGPPGPPGPKVDMEGTLSGISGEPGPPGLRGAKGEPGRDGERGPKGDKGEHG
AKGDRGEVGEKGRDGSPGPSGERGPPGLEGKPGNQGDPGPHGVPGLAGPPGPQGPSGLKG
EPGEPGPPGRGLPGPPGVVGLPGPPGSSGLVGPQGAPGLPGQVGETGKPGVTGRDGKDGE
RGAPGVPGPPGLSGPVGPKGEPGATGLPGQAVVGPPGMKGEKGAPGGLAGDLVGEPGSKG
DRGLPGPRGEKGEAGQPGEPGDPGEDGRKGAAGLRGEKGSMGIGIQGPPGSDGPPGLKGD
SGLPGPPGPPGAPGVVGFPGHAGPRGEPGQPGPSGERGLMGSPGKEGAPGPSGLPGPTGA
SGAPGTSGPKGDKGDPGVGQPGARGERGDPGIRGENGRPGLEGDRGPAGPPGNRGERGDK
GDVGAPGLKGDKGDTAVMEGPPGPRGPKGETGDRGLRGLDGDKGARGEIGLPGEKGVKGE
LGDRGSPGSQGVRGPMGQKGESGDPGIPGALGLSGKDGVPGIPGEKGEAGYMGPRGPKGD
RGLKGACGQDGEKGDKGEAGLHGRPGLPGRKGEMGEMGLPGLSGHPGKEGLIGPKGDRGF
DGQQGPKGDQGEKGERGAPGVGGIQGPRGSDGASGPPGPPGSTGPKGPEGIQGQKGERGP
PGESVVGTRGAPGIPGERGEQGSIGPVGPRGEKGEASMTESDIRSFIRQEMSQHCACGGQ
FISSGSRPLPSYSADTPGPGPWPRPVPVLRLSHAEEEGPGPPEDDEYSLEDYEDTEGDAT
EEPWAAHGVCSLPMDEGSCSSYTLRWYHRPGRGCHPFVFGGCEGNANRFSSREDCERQCL
PHGGPGAPPVSQR
NT seq
8682 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtggttcctgctcactgctgtggtcatcggaaccctgtggttgcccgtgaaa
ggacaggcggagagaggtcgagtgacctgcaccaacctctatgctgctgacatcgtcttc
ctgctggatggatcctcctccattggccgaaacaactttcgagaagtccgggccttcatg
gaggggctggtgcttcccttcactgaggtcataggggcttctggtgtccgattcagtgtg
gtgcagtacagcgatgacccacggactgagtttggcctggatacctatggttctggcagt
gatgtggtccaagcagtgcgtgagctcacttacaagggaggaaacactcgcactggggct
ggattcagacacattgcagaccatatctttctgcctcagcttgcccggcctggtgtcccc
aaggtttgcatccttatcactgatggaaagtctcaggaccaggtggagccagcagctcag
aggctgaagaggcagggagtgaaggtgtttgcagtggggatcaagaatgctgaccaggga
gagcttcgaagggcagcctcagaaccaccagatgttttcttctacttcgtcaatgacttt
agcatcctcagcaccctgctgccccttgtgtcccgtcgagtctgcaccaccacagggggc
accccccagatcctaccctcagagggcccccactctggcccccgagatctggtgctatca
caggcaaccagtgaatccctcttggctgaatggacagcagctagtggtcctgtgatcagc
tacaaggtccagtatgtccctctcactgggctagggcagcctgtgcctgaccagcggcag
gaggtgactgtaccagcaggggagacaagggtccggctgcaaggcttgcggccacagact
gaataccaggtgacagtggttgcccagtatgccaacagtgttggggacgctgtgagtagg
actgcccagactgctgcactggaggggcccatgatctccatccagaatgccacagctcat
actctcctggtggcctggcgggctgtggctggagccagtggttatcgagtgacctggaga
agtttagagagtgggtcatcccagcagctggacattggccgaggccaaacatctgccctt
ctaaagggcctgagcccagacacagaatatgtggtgactgtgacccctctgcatggccgg
acaccagggtcttctgcatcactgacagcacgaacagagatgggcatcattcagaacttg
cagacggtcatcttggggcccacatccatccatgtattctggacccacatccctgaagcc
cagggatataggctggaatggagacgagtgagcggttcagagccaacacagacagtggtg
ctgcccacggaggtgactagctatcaggttcaggggctgcagccaggcactgagtaccgg
ctcacactctataccctgtatgagggccgtgaagtcgccacacctgccaccatctctcag
actggtaagctggaaccggctcctggccgagtgtccgatttacgagtcgctgaagcctcc
ccatccaggcgatcggtaagagtggtctggagccctgtgcccagtgtctctggctaccgt
ttcgtgctgcgcaacacacaagatggctctgagaagacacagaggcttcctcctgagcag
acaagctttgagctagacagaatccagcccggtgtaagctatgtagtgcgtgtgtcagcc
ctggcaggaaatcgagaaggcactcctggcatcctcactgttcggcttgacccggagccc
ttgcccagagttcccagatttcgagtggtagcatctgagccaggccgggtccaggtatcc
tgggggtcagtccctggagctagtggttatcggctaagttggcggctgagagatggccat
gagtcttccaggaccctgacggcagactctacatcctttgacattgtgggacttcggcca
ggggcctcataccaagtgtcagtgtctgccctacggggtgttgaccagggccccccctca
gtcatcaccatccacacagattctccagggtctgtgtctgcccttcgtgtgattcatgct
gggagctcatctgtccggatcacctggaccggggtcccaggagccacaggctataggatc
tcttggcactcaggcagagggccagaacaatcccagctggtacctggggacgcttcaaca
gcccaactcgaggggctggaaccaaacacagactacacagtgcgagtaacagcccaggtg
ggcagcttggaagggcctgctgcatctgtggctgtgaggacggccccagagcccgtaggt
gctgtgtccaggctccagattcttgactcatccagtgacgtcgtacgtgtgacctgggtg
ggagtccctggtgccacttcctacaggctggtgtggggaaggagagaaggcggcccagag
agcagccggatgctcccaggagacacggactcagctgagattgggggcctggagggaggg
gtcagttatacagtccgagtgaccgcactgatcgggaaccgcgagggggcgcccgtgagc
ctcacagtgaccacacccccagcatctctttctgtcccgggctcctttcggctccagcac
agtgaggagcgggtactgcgcctggcttgggatcctgtgcccgggtcgggcgggttccgg
ctccgttggcggcctgaaggaggcccagagcagtccagggtcctgggcccagaagtcagc
cgctatgacctggtagggttggagccagggacattgtaccatgtgaccctgagcactttg
ggtccttctggatccggggagagcacaccagtgaccctatctgtccgaactggccttccc
tcccttaccactgaccttcgtactgtggagacctcaatggattcagtgacactggcttgg
accccagttccaggggcatctagctacatcttgtcttggagaccacttccaggctctggc
tacactgcccctgggtcccaacagacacttccaggctccttgcactcccaaagagtaaca
ggactggaacctggcgtctcctacaccttttccttaacccccatccaaggaagtagccga
ggtcctgaggcttcactcactcaacacattggttgctcacatggccgggcggatgttgtg
ttcctggtccatgccactagggacaatgagcatcactcaggtgttgtgaagtctgccctc
agccgcctggtatctgctctggggcctcttgggccagatgctatgcaggttgggcttgta
gcctacagtcaccgaccgtcccccctggtccccttgaacggctcctatgatcgaaactcc
atcctccagcggatccagggcattccctacacagatccgagtggaaacaatcttggtgtc
gcaatcactacggcctacaggtacctgttgggccctggcagcagcgggcgacgctcccac
gtgccaggcttgctggtgctggtggtggatgggccttctggggacgatgccatcagtccc
gctcgagaggcccaggctgcagggctctctgtgctcgtcctgggcatgcctggcgcccaa
ccagagcagctgaggcgtctggtggctggcgtggatcctgcccccgtctttatggctgtg
gacagtgcccgtagcctggagcaggcagtgggcggcttggctactgctctttgccaggca
gcctctggcactcagccgaggccctcgccctgcccatcacagtgtccaaagggccagaaa
ggggagcctggagccacgggccagaaaggacaagttggcccccctggagacccgggcaga
agcggccctcctggacctcaggggttacctggaggtggtgagaagggggagagggggttc
cccggagtagatgggcgaccaggcagccctgggaaccctggaagtcctggtttgacaggc
tctcctggccgacctggccctcgaggggaagcgggggaaccaggcctgccagggcagaag
ggggagccggggaagcctgggtctgttacaggaggagggacagggctgccaggcaagaag
ggggagccgggtgtccagggtgacaagggtgagagaggagagccgggccttcctggacca
ggcagtggaggtgttggagggggtgacccagggcttccgggcctcccaggaaatccaggg
cccatgggtccccctggacttcgtggggagaaaggagacaagggcaaaggcgaagatgga
tttccagggctcccagggcgacaagggaacccaggagacagaggtcctcgaggaccacca
ggagaaccaggaagcaaaggagacccaggccagccagggtcattgggggaagctggagag
aagggtgatcggggcttcccaggtccacctgggctgcagggggagcctggcttgtcaggg
agatctggagctgagggcccagagggacctccaggaccagctggtcgaaggggagagaag
ggagaacctggagagcctggcaaacctggagaggtcgcaggacttgatggtgctggagtg
aaaggagagaaggggaatctgggcccagagggaccccgaggagctccaggacccaaaggg
gatcggggtctacctggagttggtgttcctggggatcctggccccaaaggagagcttgga
gatcgtggtgctattggcctcacaggcagagctgggcccaagggcgaggttggggcttct
ggagacaaaggggagccgggacgaccagggcctccaggacccatgggcccccgagggaga
gatggcggaactggagagaagggggatgaaggccctgtgggtgagacaggactgcctgga
aagcctggagaccggggtcttcggggggtccccggcattcggggcccacctggtgagaag
ggagaccagggtgatcccggagaggatggacaaaatggcagtccaggactaacgggtccc
aaaggtgaccgtggagaaccggggccaccaggaccccctgggagattggtggattcaggg
cctggaattccagggactggagagaaaggaacaaagggggaggccggtgaccctggagag
gatggggctcggggccccaagggtgatgctggacccccaggatctcctggggagaggggg
actgaaggattacgagggccccctggaccccggggagaaccaggtgaccgaggcccagct
ggagagaagggtgagcggggaacccctgggtctgatggtcggaatggactggatgggaag
ccaggagcagtaggaccccctggcctgaggggtgacactggcaaaactggggagcctgga
agagatggactcccaggtttgagaggagaacatggaccccctggacctgctgggcttcct
ggagtgactgggaagcctggagatgatggcaaaccagggctgaatgggaaaaatggagag
cctggagaccctggagaagacgggaggaagggtgacaagggcgaagctggatcccctgga
agagatggtcgggatggttccaaaggtgaacgtggagatgtaggcaccccaggactacag
ggacccccaggactccctggcccagttggtcccccaggccaggggtttccaggtgtatct
gggagtccaggacccaagggtgaccgaggagaagcaggagccagaggtgaacaggggctc
cctggcgagcgtggcttgaaaggggaatcgggctctgtgacgaacctagaacaatccctg
gagtcccttggcatcaaggtgtctacccttcgacaaattgtgcgagagggctcagaggac
ttctatggcttccctgaccgtttccgaggtcagaaaggggagcctggagagcgtggccca
atgggcaaggaggggcctgtcggcttgactggagaacgaggctcgaagggggacagagga
gacacgggcccccaaggacctccaggccaggctcttatagagagaggagcttctggtccc
cccggtcagcctggggaaccaggcaaacctggtatccctgggctcccaggccgagcagga
gagctgggtgaggctggacggccgggggagaggggtgagcgtggagagaaaggagatcgt
ggagaacaaggcagagatgggttaccagggcctcctggaccccctgggccaaaggttgac
atggaagggacactttctggaatctctggagagcccggtccccccgggctcagaggagct
aagggtgaaccaggcagagacggtgaacgaggccccaaaggagacaagggagagcacgga
gccaagggcgatcgtggagaggttggagagaagggccgagatggcagcccgggcccttct
ggagagcggggaccgccagggctagaaggaaagccgggcaaccagggggaccctggacca
catggtgtcccgggacttgctggccctccgggacctcagggtccatctggcttgaagggg
gagcctggtgagcctggaccacctgggcggggcctgcctggtcccccgggggttgtgggt
cttcctggccccccaggttcctctggcctcgtgggtccccagggtgcaccgggtttgcca
ggccaagtgggggagacagggaagcctggagtgacgggccgggatggcaaagatggagaa
aggggagctcctggtgtcccgggaccacctggcctgtccggccctgttggacccaaaggg
gagcctggagctacaggactcccaggacaggctgtggttgggcctcctggtatgaagggt
gagaagggagcccctggaggccttgctggagacctggtgggagaacctggatctaaagga
gaccgaggacttcctgggcctcgaggagagaagggtgaggctggacaacctggagaacct
ggagaccctggagaagatggccggaaaggggcagcaggactcaggggggaaaagggctcc
atgggcattgggattcagggcccccctggatcagatgggcctccaggcctgaagggagac
tcaggccttccaggtcctcctggacccccaggagcaccaggtgttgtaggattccctgga
catgcaggccccagaggagagcctgggcagccgggcccttctggagagcggggtttgatg
ggttcccctgggaaagaaggagccccagggccttctgggctcccaggaccaactggggca
tcgggagcacctgggacctctggacccaaaggagacaagggagatcctggagtggggcag
ccaggagcccgaggagagagaggggatccaggcatccggggtgaaaatggccgtcctggt
ctggagggagacagaggcccagcaggccctccagggaaccggggagaacgaggggacaag
ggtgatgtgggagcccctggactaaagggtgacaagggtgatacagctgtgatggagggg
cctcctggacctcgaggccccaagggagagacaggtgaccgaggcctgagaggcttagat
ggtgacaaaggagctagaggggaaattggccttcctggggaaaagggcgtgaagggagaa
ctgggagacagaggctctcctggctcccagggtgttcgaggtcccatggggcagaagggc
gagtctggtgacccagggatccccggggcattgggcctctctgggaaggatggagttccc
ggtatccctggtgagaagggagaggccggctatatgggccctcgaggtcccaagggagat
cggggcctgaaaggggcctgtggccaagacggggagaagggggacaagggggaagcaggt
ctccatggacgacctggactccctggacggaaaggagagatgggggagatggggctacca
ggcctgtctgggcacccaggaaaggaaggtttgattggtcccaagggtgaccgaggtttt
gatggtcaacaaggacccaagggtgaccagggcgagaaaggggagaggggagctcctggt
gttgggggaatccaaggccccaggggcagtgatggagcctcaggaccccctgggcctcca
ggcagcacgggccctaaaggtcctgagggcatccaggggcaaaagggcgagaggggtccc
cctggggagagtgtggtgggtacccgcggggcccctggaatccctggagagcgaggggag
caggggagcataggcccagtgggcccccgaggagagaaaggggaagcatctatgacggaa
tctgacatccgaagcttcattcggcaagagatgagccagcattgcgcctgtgggggtcag
tttatctcttctggatcaagaccccttcccagttactccgcagacaccccgggccctggg
ccctggcctcgtccagtacctgtgctgaggctctcccatgctgaggaggaagggccgggg
cctccagaagatgacgagtactccctggaggattacgaggacacggagggcgatgccacc
gaggagccctgggctgctcatggtgtgtgctctctgccgatggatgagggctcttgttcc
agttacaccctacgatggtatcaccgccctggcaggggctgtcatccctttgtgtttggt
ggctgtgagggcaatgccaaccgcttcagttcccgggaggactgtgaacgacaatgtctc
ccccacggaggcccaggtgctccccctgtctcccagagatga
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integrated database retrieval system
