Gracilinanus agilis (agile gracile opossum): 123247855
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Entry
123247855 CDS
T07702
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123247855 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gas01007
]
123247855 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gas03016
]
123247855 (VARS1)
Enzymes [BR:
gas01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
123247855 (VARS1)
Amino acid related enzymes [BR:
gas01007
]
Aminoacyl-tRNA synthetase
Class I (U)
123247855 (VARS1)
Transfer RNA biogenesis [BR:
gas03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123247855 (VARS1)
Prokaryotic type
123247855 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
Val_tRNA-synt_C
Jag_N
Arc1p_N_like
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
123247855
NCBI-ProteinID:
XP_044532837
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All DBs
Position
4:complement(257131652..257151304)
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AA seq
1265 aa
AA seq
DB search
MMSILYVSPHPDAFPSLRALIAARYGESGPGPGWGGPPPRVCLQPPPTSGSCIPPPRLPV
LEQGPGGLRVWGAAAVAQLLWPAGMGGPGGSRGATLVQQWVSYADGELVPAACGATLPAL
GLRNPTQDPQAALGALGRALGPLEERLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPP
ARWAWGNVSRWFMTCVQQPEFRAVLGEVSLCSGIRPIPQQPGTEASGPPKTAAQLKKEAK
KREKLEKFQQKQKNQLHQPPPGEKKLKIEKKEKRDPGVITYDIPTPPGEKKDVSGPMPDS
YSPQYVEAAWYSWWENKGFFKPEYGRASLAEPNPRGIFMMCIPPPNVTGSLHLGHALTNA
IQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWRERGMSRHQLGREAFLREVWKW
KNEKGDRIYHQLRKLGGSLDWDRACFTMDPKLSAAVTEAFVRLHNDGVIYRSTRLVNWSC
SLNSAISDIEVDKKELSGRTLLSVPGYEEKVEFGVIVSFAYKIEDSESNEEVVVATTRIE
TMLGDVAVAVHPNDPRYQHLRGKSVMHPFLLRSLPIIFDEFVDMEFGTGAVKITPAHDQN
DYEVGQRHKLEAVSIMDHRGNLINVPPPFLGLPRFEARKAVLAALKDKGLFREVKDNPMV
VPLCNRSKDVVEPLLKPQWYVRCGEMAQAASAAVTRGDLKILPEVHQKIWHIWMDNIRDW
CISRQLWWGHRIPAYFVTVNDPAVPPGEDPDGRYWVSGRNEEEAREKAAKEFGVSPDKIS
LSQDEDVLDTWFSSGLFPFSILGWPNQTEDLSIFYPGTLLETGHDILFFWVARMVMLGLK
LTGKLPFKEVYLHALVRDAHGRKMSKSLGNVIDPLDVISGLSLQGLHDQLLNSNLDPNEM
EKAKEGQKADFPNGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
ALRALGDGFIPSPTPQASSQESLADRWIRSRLSEAVGLSHQGFHAYDFPTVTTAQYSFWL
YDLCNVYLECLKPVLSGKDQVAAESARQTLYTCLDVGLRLLSPFMPFVTEELYQRLPRRG
PQAPPSLCVTPYPEPDELSWKDPEAEAAFELALSITRAVRSLRADYNLTRSQPECFLEVT
DEATGTQASAVSGYVQALSNTGAVNVLLPGSPAPQGCAVGLASDRCSVHLQLQGLVDPAR
ELAKLRAKRGEAERQAQRLRERRAVPDYATKVPSQVQESEEAKLQQTEAELKKVDEAIAL
FEKML
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccatcctatatgtgtctcctcaccctgatgccttccctagccttcgggccctt
attgctgctcgatatggagaatctggacctggccctgggtggggagggcctccgcctcgt
gtttgcctccagccaccccctaccagtggaagttgcatccccccacctcgtctaccagtc
ctggaacagggaccagggggcctgagggtatggggagcagcagctgttgcccagctgctg
tggcctgcagggatgggaggtcctggaggcagccgaggagccactcttgtccagcagtgg
gtcagctatgctgatggagaacttgtgcctgctgcctgtggggccacactacctgcttta
ggacttcggaatccaactcaagatcctcaggcagctttgggagccctaggacgggcactg
ggcccattggaggagagactgagattgcatacctacttggcaggggaagcccccactttg
gctgacctggcagctgttacagcccttctgcttcccttccgctatgttctagaccctcct
gctcgctgggcttggggtaatgtgagtcgctggttcatgacatgcgtccagcaaccagaa
tttcgagctgtgttaggagaagtgtccctgtgctcagggatacggcctatcccacagcaa
ccaggcactgaggcttctgggccccccaaaactgcagcccagctgaaaaaggaagctaag
aagcgggagaaactagagaaatttcaacagaagcaaaagaaccagctgcatcagccaccc
cctggggagaaaaagctgaaaattgagaagaaagagaaacgggaccctggggtcataact
tacgacattcccaccccaccaggggagaaaaaagatgtcagtggccccatgcctgactcc
tatagcccccagtatgttgaggctgcatggtactcatggtgggagaataaaggattcttc
aaaccagagtatgggcgtgctagtctggcagagcctaatcctcgaggtatcttcatgatg
tgcatacctcctcccaacgtgacaggatccctgcatcttggtcatgccctcactaacgcc
atccaggactcactgacccgctggcaccgaatgagaggagagacaactctctggaatcca
ggctgtgaccatgctggtattgccacacaagtggttgtggagaagaaactatggcgggaa
cgagggatgagccgacaccagcttggtagagaggccttccttcgagaggtctggaaatgg
aaaaatgagaagggagaccgaatttaccatcagctaaggaagcttgggggctccttggac
tgggatcgagcttgtttcaccatggaccctaaactctcagcagctgtgacagaagctttt
gtccgcctccataatgatggtgtcatttaccgcagtacccgcctcgtcaactggtcctgt
agtctcaattctgctatctctgacattgaagtagataagaaagagctttcaggccgaacc
ctgctttctgtcccaggctatgaggagaaggtggaatttggggtcattgtttcttttgcc
tacaagatagaagattcagagagcaatgaggaggtggtggtagcaactactcgtatcgag
actatgttgggagatgtagctgtggcagtgcaccctaatgatcctagataccagcacctc
cggggaaagagtgttatgcacccattcctccttcgaagccttcctattatctttgatgag
tttgtggacatggagtttggcactggtgctgtaaaaatcacaccagcccatgatcagaat
gactatgaagtggggcaaaggcacaaacttgaggcagtgagcatcatggaccatcgaggc
aacctcatcaatgttcctcctccctttctgggcctgcctcggtttgaggcaaggaaggca
gtgttagcagccctaaaagacaagggattgttccgggaagtgaaggacaatccaatggtg
gtacctttgtgcaaccgatccaaggatgtagttgaacccctccttaagccccagtggtat
gtgagatgcggggagatggcccaggcagccagtgcagctgtgacccgaggtgaccttaag
atactgcctgaggtccatcagaaaatatggcacatctggatggacaacatcagagactgg
tgtatctcccggcagctatggtggggtcaccgaatcccagcctactttgtcactgtcaat
gaccctgcagtgccccctggggaggatcccgatggtcggtattgggtgagtggccgaaac
gaggaagaggcaagggagaaggcagcgaaggagtttggagtgtccccagacaaaattagc
ctctcacaggatgaggatgtcttagacacatggttctcctctggcctcttccccttttcc
atcttaggatggcccaaccagacagaggacctgagtatattctatccaggaaccctgcta
gagacaggacatgacatcttattcttctgggtagcccgcatggtgatgctaggtctgaag
ctaacaggaaagctgcccttcaaagaggtttatcttcatgcccttgtcagagatgcccat
ggacggaaaatgagtaaatcacttggcaatgtcattgaccccctggatgtcatcagtggg
ctttccctgcagggacttcatgaccagttactgaacagcaaccttgaccccaatgaaatg
gagaaagccaaggaagggcagaaggccgatttccccaatggaatccctgagtgcggcaca
gatgctctcagatttggactttgtgcttacacatctcagggtcgggacattaacctggat
gtgaaccgaatccttggatatcgacatttctgtaacaaactctggaatgccaccaagttt
gcccttagggcactgggagatggatttataccctcacctactccccaagccagcagtcag
gagagcttggctgaccgctggatcaggagccgcctgagtgaagctgtagggctgagccat
cagggtttccatgcctatgacttccctaccgtcactactgcccagtacagcttttggctc
tatgacctctgcaatgtctacctggagtgcctgaaacctgtgctctctgggaaggaccaa
gttgcagcagagagtgcccggcagactctctatacttgcctggatgtgggcctgagactc
ctctcgcccttcatgccctttgtgactgaggagttgtatcagcggctgccccgccggggt
ccccaggcaccacccagcctctgcgtcaccccctacccagagcctgatgagctttcctgg
aaggatcctgaggccgaggctgcctttgagctggcgctcagcattacccgggctgttcgt
tctctccgagccgattacaaccttacccggagccagcctgagtgtttcctggaagtgaca
gatgaagcaacaggaacacaagcttctgcagtgtcgggctatgtgcaagccctctccaac
acgggggctgtgaatgtcctgctgcctgggtcccctgccccacagggctgcgctgtgggc
ctggcctctgaccgatgctctgtccacctgcagcttcaggggctggtggatcctgcccga
gagttggcaaagcttcgggccaagcgaggggaagctgaacgtcaggcccagaggcttcgg
gagcgtcgggctgttcccgactacgccaccaaggttccctcccaagttcaggagtctgag
gaggccaagctccagcagacagaggcagagctgaagaaggtagatgaagccatcgccctg
tttgagaagatgctgtga
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integrated database retrieval system
